Hasan Akgül

Study on determination of bioactive potentials of certain lichens

Lichens are symbiotic associations that are formed by fungi and algae or cyanobacteria. The number of lichen species investigated pharmaceutically is still very low at present. The present study aims to determine the antioxidant activities, antibacterial activities, DNA protective activities, and oxidative stress status of Bryoria fuscescens (Gyeln.) Brodo & D. Hawksw., Parmelina tiliacea (Hoffm.) Hale, and Umbilicaria decussata (Vill.) Zahlbr. Lichens were extracted with ethanol in the Soxhlet device. The DPPH method was used to determine antioxidant activities. DNA protective activity was determined using pBR322 supercoil DNA. Antibacterial activity was determined with dilution test on 5 different species of bacteria (Enterocossus faecalis, Klebsiella pneumoniae, Pseudomonas aeruginosa, Escherichia coli, and Staphylococcus aureus). Total antioxidant status (TAS), total oxidant status (TOS), and oxidative stress index (OSI) were defined with Rel Assay Diagnostics kits. It was observed that DPPH free radical scavenging activities in lichen ethanol extracts increased with increasing concentration. The highest antioxidant activity was observed in B. fuscescens and the lowest activity was determined in U. decussata. It was also determined that the ethanol extracts of all lichen samples had DNA-protective activity. The highest antibacterial activity was detected in B. fuscescens, while the lowest activity was detected in U. decussata. It was determined that B. fuscescens had the highest oxidative stress index and U. decussata had the lowest value. It appears that the ethanol extracts of the lichen samples utilized in the study could be used as an alternative and complementary resource in medical treatment.

Geastrum pectinatum as an Alternative Antioxidant Source with some Biochemical Analysis

The present study aimed to determine and compare total antioxidant status (TAS), total oxidant status (TOS), oxidative stress index (OSI) and Fe, Zn, Pb, Cu and Ni content of Geastrum pectinatum Pers. mushroom that was collected in different areas in Antalya province (Geyikbayiri and Termessos National Park). TAS, TOS and OSI values were measured using Rel Assay kits. Heavy metal content was determined with atomic absorption spectrophotometry using the wet decomposition method. Study findings demonstrated that samples collected in Termessos National Park had more suitable heavy metal and oxidative stress conditions when compared to those collected in Geyikbayiri. Furthermore, it was considered that due to the high TAS values, the said mushroom could be consumed as a natural antioxidant source in alternative medicine.

Biochemical changes induced by grape seed extract and low level laser therapy administration during intraoral wound healing in rat liver: an experimental and in silico study

In the present study, the changes that occur in rat liver tissue as a result of the use of grape seed extract (GSE) and low level laser therapy (LLLT) in intraoral wound (IW) healing are analyzed using biochemical parameters. Diode laser application groups received 8 J/cm2 dose LLLT once a day for 4 days (810 nm wavelength, continuous mode, 0.25 W, 9 s). As a result of the biological parameter analysis, it was determined that the oxidative damage caused by the IWs and recovery period on 7th and 14th days could be substantially removed with GSE applications that have antioxidant capacity especially in rat liver tissue. In addition, the active compound of grape seed, catechin is studied in the active site of glycogen synthase kinase 3 (GSK3) target using molecular modeling approaches. Post-processing molecular dynamics (MD) results for catechin is compared with a standard GSK3 inhibitor. MD simulations assisted for better understanding of inhibition mechanism and the crucial amino acids contributing in the ligand binding. These results along with a through free energy analysis of ligands using sophisticated simulations methods are quite striking and it suggests a greater future role for simulation in deciphering complex patterns of molecular mechanism in combination with methods for understanding drug-receptor interactions.

New Approaches in Traditional and Complementary Alternative Medicine Practices: Auricularia auricula and Trametes versicolor

Several mushroom species are consumed by collecting from the nature or in cultured form for their nutritional and medical characteristics. The objective of the present study is to determine antioxidant activities, DNA-protective activities, total antioxidant status (TAS), total oxidant status (TOS), oxidative stress indices (OSI) and Fe, Mg, Zn, Cu, Na and Ca content in Auricularia auricula (L.) Underw. and Trametes versicolor (L.) Lloyd mushroom species. Mushroom ethanol extracts were obtained and antioxidant activities with DPPH method, TAS, TOS and OSI values with Rel Assay Diagnostics kits, and DNA protective activities using pBR322 supercoil DNA were identified. Furthermore, Fe, Mg, Zn, Cu, Na and Ca contents were determined with atomic absorption spectrophotometer. It was determined that antioxidant potential of mushroom ethanol extracts were low compared to the standard and they did not have DNAprotective activities. It was also observed that the mushrooms have variable element content, and have similar TAS, TOS and OSI levels. High OSI values found in both mushroom species showed that these mushroom are unhealthy. Thus, it was recommended to demonstrate caution in consumption of mushrooms collected in these regions. However, it was also considered that the mushroom samples collected from regions with adequate OSI values could be used as antioxidant.

Fomitopsis pinicola in healthful dietary approach and their therapeutic potentials

Certain macrofungi species have been used for medical purposes and as nutrients since the old times. The present study aims to determine and compare total antioxidant status (TAS), total oxidant status (TOS), oxidative stress index (OSI) values, and Fe, Zn, Cu, Pb, and Ni levels in Fomitopsis pinicola (Sw.) P. Karst samples gathered in Balikesir province Kazdagi National Park and Yalova province Cinarcik Hasan Baba Woods in Turkey. TAS, TOS, and OSI values of mushroom samples were measured with Rel Assay kits. Mushroom heavy metal content was determined using an atomic absorption spectrophotometer and wet decomposition procedure. In the samples collected from Cinarcik district, OSI values were 0.99±0.03, while in the samples collected from Kazdagi National Park, OSI values were 0.13±0.01. Fe content in the samples collected from Cinarcik district were 265.9±70.5 ppm, while Fe content in the samples collected from Kazdagi National Park were 31.31±1.43 ppm. As a result, it is considered that the mushrooms c...