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Dive into the research topics where Henry Dube is active.

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Featured researches published by Henry Dube.


Nature Communications | 2015

Sunlight-powered kHz rotation of a hemithioindigo-based molecular motor

Manuel Guentner; Monika Schildhauer; Stefan Thumser; Peter Mayer; David S. Stephenson; Henry Dube

Photodriven molecular motors are able to convert light energy into directional motion and hold great promise as miniaturized powering units for future nanomachines. In the current state of the art, considerable efforts have still to be made to increase the efficiency of energy transduction and devise systems that allow operation in ambient and non-damaging conditions with high rates of directional motions. The need for ultraviolet light to induce the motion of virtually all available light-driven motors especially hampers the broad applicability of these systems. We describe here a hemithioindigo-based molecular motor, which is powered exclusively by nondestructive visible light (up to 500 nm) and rotates completely directionally with kHz frequency at 20 °C. This is the fastest directional motion of a synthetic system driven by visible light to date permitting materials and biocompatible irradiation conditions to establish similarly high speeds as natural molecular motors.


Angewandte Chemie | 2011

Encapsulated Carboxylic Acid Dimers with Compressed Hydrogen Bonds

Dariush Ajami; Peter M. Tolstoy; Henry Dube; Severin Odermatt; Benjamin Koeppe; Jing Guo; Hans-Heinrich Limbach; Julius Rebek

Interacting guests cannot exchangepartners rapidly inside capsules (as they do in bulk solution)and they are separated from solvent molecules by mechanicalbarriers. Instead, the capsule is the solvent, fixed in placearound the solute. Here we report a study on hydrogen-bonded carboxylic acid dimers as guests within an expandedcapsule assembly. It reveals evidence of compression of theguests in the isolated environment of the host.When cavitand 1 and glycoluril 2 (Figure 1) are dissolvedin deuterated mesitylene and suitable guests are present, theracemic capsule 1·2


Journal of the American Chemical Society | 2016

Twisted Hemithioindigo Photoswitches: Solvent Polarity Determines the Type of Light-Induced Rotations.

Sandra Wiedbrauk; Benjamin Maerz; Elena Samoylova; Anne M. Reiner; Florian Trommer; Peter Mayer; Wolfgang Zinth; Henry Dube

Controlling the internal motions of molecules by outside stimuli is a decisive task for the generation of responsive and complex molecular behavior and functionality. Light-induced structural changes of photoswitches are of special high interest due to the ease of signal application and high repeatability. Typically photoswitches use one reaction coordinate in their switching process and change between two more or less-defined states. Here we report on new twisted hemithioindigo photoswitches enabling two different reaction coordinates to be used for the switching process. Depending on the polarity of the solvent, either complete single bond (in DMSO) or double bond (in cyclohexane) rotation can be induced by visible light. This mutually independent switching establishes an unprecedented two-dimensional control of intramolecular rotations in this class of photoswitches. The mechanistic explanation involves formation of highly polar twisted intramolecular charge-transfer species in the excited state and is based on a large body of experimental quantifications, most notably ultrafast spectroscopy and quantum yield measurements in solvents of different polarity. The concept of pre-twisting in the ground state to open new, independent reaction coordinates in the excited state should be transferable to other photoswitching systems.


Journal of the American Chemical Society | 2011

Boronic acid hydrogen bonding in encapsulation complexes.

Dariush Ajami; Henry Dube; Julius Rebek

Hydrogen bonding is a key determinant of much macromolecular structure in nature, but individual donor and acceptor pairs are rarely observed in solution. Their weak interactions result in nanosecond lifetimes and rapid exchange of partners. Reversible encapsulation isolates molecules in very small spaces for milliseconds to hours and allows their characterization by NMR methods. Here we report a competitive study of hydrogen-bonding functions--carboxylic acids, primary amides, and boronic acids--within a multicomponent capsular assembly. The pairwise co-encapsulation of these molecules allows the direct observation of homodimeric boronic acids and their heterodimeric complexes with carboxylic acids and primary amides. The efficiency of boronic acids as hydrogen-bonding partners derives from their adaptable structures rather than from their intrinsic acid/base properties.


Chemical Communications | 2011

A transparent photo-responsive organogel based on a glycoluril supergelator

Konrad Tiefenbacher; Henry Dube; Dariush Ajami; Julius Rebek

The synthesis of an azo-benzene glycoluril supergelator is reported. The control over the gel/sol state can be accomplished by irradiation and heat, but also (in a unidirectional sense) by incorporation of the glycoluril into a more stable supramolecular assembly.


Chemistry: A European Journal | 2014

Making fast photoswitches faster--using Hammett analysis to understand the limit of donor-acceptor approaches for faster hemithioindigo photoswitches.

Benjamin Maerz; Sandra Wiedbrauk; Sven Oesterling; Elena Samoylova; Artur Nenov; Peter Mayer; Regina de Vivie-Riedle; Wolfgang Zinth; Henry Dube

Hemithioindigo (HTI) photoswitches have a tremendous potential for biological and supramolecular applications due to their absorptions in the visible-light region in conjunction with ultrafast photoisomerization and high thermal bistability. Rational tailoring of the photophysical properties for a specific application is the key to exploit the full potential of HTIs as photoswitching tools. Herein we use time-resolved absorption spectroscopy and Hammett analysis to discover an unexpected principal limit to the photoisomerization rate for donor-substituted HTIs. By using stationary absorption and fluorescence measurements in combination with theoretical investigations, we offer a detailed mechanistic explanation for the observed rate limit. An alternative way of approaching and possibly even exceeding the maximum rate by multiple donor substitution is demonstrated, which give access to the fastest HTI photoswitch reported to date.


Angewandte Chemie | 2017

Direct Observation of Hemithioindigo-Motor Unidirectionality

Ludwig Alexander Huber; Kerstin Hoffmann; Stefan Thumser; Niklas Böcher; Peter Mayer; Henry Dube

Hemithioindigo molecular motors undergo very fast unidirectional rotation upon irradiation with visible light, which has prevented a complete analysis of their working mechanism. In this work, we have considerably slowed down their motion by using a new synthesis for sterically hindered motor derivatives. This method allowed the first observation of all four intermediate states populated during rotation. The exact order in which each isomeric state is formed under irradiation conditions was elucidated using low temperature 1 H NMR spectroscopy in conjunction with other analytical methods. At the same time, complete unidirectionality could also be directly shown. Access to slowly rotating hemithioindigo motors opens up a plethora of new applications for visible-light-induced unidirectional motions, especially in areas such as catalysis, smart materials, and supramolecular chemistry.


Chemistry: A European Journal | 2016

Photocontrol of Polar Aromatic Interactions by a Bis-Hemithioindigo Based Helical Receptor

Manuel Guentner; Edgar Uhl; Peter Mayer; Henry Dube

The first example of a bis-hemithioindigo (bis-HTI)-based molecular receptor was realized. Its folding and selective binding affinity for aromatic guest molecules can be precisely controlled by visible light and heat. The thermodynamically stable state of the bis-HTI is the s-shaped planar Z,Z-configuration. After irradiation with 420 nm light only the E,Z-configuration is formed in a highly selective photoisomerization. The E,Z-isomer adopts a helical conformation because of the implementation of repulsive steric interactions. The E,Z-configured helix is able to recognize electron-poor aromatic guests exclusively through polar aromatic interactions and also distinguishes between regioisomers. After heating, the Z,Z-configuration is completely restored and the aromatic guest molecule is efficiently released.


Chemistry: A European Journal | 2017

Bistable Photoswitching of Hemithioindigo with Green and Red Light: Entry Point to Advanced Molecular Digital Information Processing

Florian Kink; Marina Polo Collado; Sandra Wiedbrauk; Peter Mayer; Henry Dube

Photoswitches reacting to visible light instead of harmful UV irradiation are of very high interest due to the mild and broadly compatible conditions of their operation. Shifting the absorption into the red region of the electromagnetic spectrum usually comes at the cost of losing thermal stability of the metastable state-the switch switches off by itself. Only recently have photoswitches become available that combine visible light responsiveness with high bistability. However, shifting the wavelengths for bistable photoswitching beyond 600 nm is still a great challenge without involving secondary processes such as two-photon absorption or sensitization. We present a simple hemithioindigo photoswitch that can efficiently be photoisomerized using green and red light while maintaining a high thermal barrier of the metastable state. This highly sought after properties allow for selective switching in a mixture of hemithioindigo dyes. In addition, protonation can be used as second independent input altering the light response of the switch and allowing construction of advanced molecular digital information processing devices. This is demonstrated by realizing a broad variety of logical operations covering combinational and sequential logic behavior. By making use of the protonation-induced loss of thermal bistability, a high security keypad lock could be realized, which distinguishes the sequences of three different inputs and additionally erases its unlocked state after a short time.


Journal of Physical Chemistry Letters | 2017

Ingredients to TICT formation in donor substituted hemithioindigo

Sandra Wiedbrauk; Benjamin Maerz; Elena Samoylova; Peter Mayer; Wolfgang Zinth; Henry Dube

Twisted intramolecular charge transfer (TICT) formation in hemithioindigo photoswitches has recently been reported and constitutes a second deexcitation pathway complementary to photoisomerization. Typically, this behavior is not found for this type of photoswitches, and it takes special geometric and electronic conditions to realize it. Here we present a systematic study that identifies the molecular preconditions leading to TICT formation in donor substituted hemithioindigo, which can thus serve as a frame of reference for other photoswitching systems. By varying the substitution pattern and providing an in-depth physical characterization including time-resolved and quantum yield measurements, we found that neither ground-state pretwisting along the rotatable single bond nor the introduction of strong push-pull character across the photoisomerizable double bond alone leads to formation of TICT states. Only the combination of both ingredients produces light-induced TICT behavior in polar solvents.

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Julius Rebek

Scripps Research Institute

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Dariush Ajami

Scripps Research Institute

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Elena Samoylova

Ludwig Maximilian University of Munich

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Severin Odermatt

Scripps Research Institute

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Peter M. Tolstoy

Saint Petersburg State University

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Benjamin Koeppe

Free University of Berlin

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Jing Guo

Free University of Berlin

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Fabien Durola

Centre national de la recherche scientifique

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