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Dive into the research topics where Hiromi Hirata is active.

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Featured researches published by Hiromi Hirata.


Nature Genetics | 2004

Instability of Hes7 protein is crucial for the somite segmentation clock

Hiromi Hirata; Yasumasa Bessho; Hiroshi Kokubu; Yoshito Masamizu; Shuichi Yamada; Julian Lewis; Ryoichiro Kageyama

During somitogenesis, a pair of somites buds off from the presomitic mesoderm every 2 hours in mouse embryos, suggesting that somite segmentation is controlled by a biological clock with a 2-hour cycle. Expression of the basic helix-loop-helix factor Hes7, an effector of Notch signaling, follows a 2-hour oscillatory cycle controlled by negative feedback; this is proposed to be the molecular basis for the somite segmentation clock. If the proposal is correct, this clock should depend crucially on the short lifetime of Hes7. To address the biological importance of Hes7 instability, we generated mice expressing mutant Hes7 with a longer half-life (∼30 min compared with ∼22 min for wild-type Hes7) but normal repressor activity. In these mice, somite segmentation and oscillatory expression became severely disorganized after a few normal cycles of segmentation. We simulated this effect mathematically using a direct autorepression model. Thus, instability of Hes7 is essential for sustained oscillation and for its function as a segmentation clock.


Molecular and Cellular Biology | 2005

Hes1 Directly Controls Cell Proliferation through the Transcriptional Repression of p27Kip1

Kaoru Murata; Masakazu Hattori; Norihito Hirai; Yoriko Shinozuka; Hiromi Hirata; Ryoichiro Kageyama; Toshiyuki Sakai; Nagahiro Minato

ABSTRACT A transcriptional regulator, Hes1, plays crucial roles in the control of differentiation and proliferation of neuronal, endocrine, and T-lymphocyte progenitors during development. Mechanisms for the regulation of cell proliferation by Hes1, however, remain to be verified. In embryonic carcinoma cells, endogenous Hes1 expression was repressed by retinoic acid in concord with enhanced p27Kip1 expression and cell cycle arrest. Conversely, conditional expression of a moderate but not maximal level of Hes1 in HeLa cells by a tetracycline-inducible system resulted in reduced p27Kip1 expression, which was attributed to decreased basal transcript rather than enhanced proteasomal degradation, with concomitant increases in the growth rate and saturation density. Hes1 induction repressed the promoter activity of a 5′ flanking basal enhancer region of p27Kip1 gene in a manner dependent on Hes1 expression levels, and this was mediated by its binding to class C sites in the promoter region. Finally, hypoplastic fetal thymi, as well as livers and brains of Hes1-deficient mice, showed significantly increased p27Kip1 transcripts compared with those of control littermates. These results have suggested that Hes1 directly contributes to the promotion of progenitor cell proliferation through transcriptional repression of a cyclin-dependent kinase inhibitor, p27Kip1.


The EMBO Journal | 2001

Hes1 and Hes3 regulate maintenance of the isthmic organizer and development of the mid/hindbrain

Hiromi Hirata; Koichi Tomita; Yasumasa Bessho; Ryoichiro Kageyama

The isthmic organizer, which is located at the midbrain–hindbrain boundary, plays an essential role in development of the midbrain and anterior hindbrain. It has been shown that homeobox genes regulate establishment of the isthmic organizer, but the mechanism by which the organizer is maintained is not well understood. Here, we found that, in mice doubly mutant for the basic helix–loop–helix genes Hes1 and Hes3, the midbrain and anterior hindbrain structures are missing without any significant cell death. In these mutants, the isthmic organizer cells prematurely differentiate into neurons and terminate expression of secreting molecules such as Fgf8 and Wnt1 and the paired box genes Pax2/5, all of which are essential for the isthmic organizer function. These results indicate that Hes1 and Hes3 prevent premature differentiation and maintain the organizer activity of the isthmic cells, thereby regulating the development of the midbrain and anterior hindbrain.


Journal of Biological Chemistry | 2003

The basic helix-loop-helix genes Hesr1/Hey1 and Hesr2/Hey2 regulate maintenance of neural precursor cells in the brain.

Masami Sakamoto; Hiromi Hirata; Toshiyuki Ohtsuka; Yasumasa Bessho; Ryoichiro Kageyama

Neural precursor cells proliferate in the ventricular zone while giving rise to neurons of deep layers first, then those of the superficial layers, and lastly, glial cells in the brain. Thus, it is essential to maintain neural precursor cells until late stages of neural development for generation of a wide variety of cell types. Here, we found that the Hes-related basic helix-loop-helix (bHLH) genes Hesr1/Hey1 and Hesr2/Hey2 are expressed in the ventricular zone, which contains neural precursor cells. Misexpression of Hesr1 and Hesr2 by electroporation in mouse brain at embryonic day 13.5 transiently maintains neural precursor cells and thereby increases late-born neurons, which are located in the superficial layers. In contrast, misexpression of the genes at later stages inhibits neurogenesis and promotes generation of astroglial cells. In transient transfection assay with cultured cells, both Hesr1 and Hesr2 inhibit transcription induced by the neuronal bHLH genes Mash1 and Math3. These results indicate that Hesr1 and Hesr2 negatively regulate neuronal bHLH genes, promote maintenance of neural precursor cells, and increase late-born cell types in the developing brain.


The FASEB Journal | 2005

Impaired fatty acid utilization in thioredoxin binding protein-2 (TBP-2)-deficient mice: a unique animal model of Reye syndrome

Shinichi Oka; Wenrui Liu; Hiroshi Masutani; Hiromi Hirata; Yoichi Shinkai; Shuichi Yamada; Toru Yoshida; Hajime Nakamura; Junji Yodoi

Thioredoxin binding protein‐2 (TBP‐2) is a negative regulator of thioredoxin and has multiple regulatory functions in cellular redox, growth, differentiation, apoptosis, and aging. To investigate the function of TBP‐2 in vivo, we generated mice with targeted inactivation of TBP‐2 (TBP‐2−/− mice). Here, we show that TBP‐2 expression is markedly up‐regulated during fasting in wild‐type mice, while TBP‐2−/− mice were predisposed to death with bleeding tendency, as well as hepatic and renal dysfunction as a result of 48 h of fasting. The fasting‐induced death was rescued by supplementation of glucose but not by that of oleic acid, suggesting that inability of fatty acid utilization plays an important role in the anomaly of TBP‐2−/− mice. In these mice, plasma free fatty acids levels are higher, whereas glucose levels are lower than those of wild‐type mice. Compared with wild‐type mice, TBP‐2−/− mice showed increased levels of plasma ketone bodies, pyruvate and lactate, indicating that Krebs cycle‐mediated fatty acid utilization is impaired. Because the fatal impairment of fatty acid utilization is a characteristically metabolic feature of Reye (‐like) syndrome, TBP‐2−/− mouse may represent a novel model for investigating the pathophysiology of these disorders.


Nature Communications | 2013

Stac3 is a component of the excitation–contraction coupling machinery and mutated in Native American myopathy

Eric J. Horstick; Jeremy W. Linsley; James J. Dowling; Michael A. Hauser; Kristin McDonald; Allison E. Ashley-Koch; Louis Saint-Amant; Akhila Satish; Wilson W. Cui; Weibin Zhou; Shawn M. Sprague; Demetra S. Stamm; Cynthia M. Powell; Marcy C. Speer; Clara Franzini-Armstrong; Hiromi Hirata; John Y. Kuwada

Excitation-contraction coupling, the process that regulates contractions by skeletal muscles, transduces changes in membrane voltage by activating release of Ca2+ from internal stores to initiate muscle contraction. Defects in EC coupling are associated with muscle diseases. Here we identify Stac3 as a novel component of the EC coupling machinery. Using a zebrafish genetic screen, we generate a locomotor mutation that is mapped to stac3. We provide electrophysiological, Ca2+ imaging, immunocytochemical and biochemical evidence that Stac3 participates in excitation-contraction coupling in muscles. Furthermore, we reveal that a mutation in human STAC3 as the genetic basis of the debilitating Native American myopathy (NAM). Analysis of NAM stac3 in zebrafish shows that the NAM mutation decreases excitation-contraction coupling. These findings enhance our understanding of both excitation-contraction coupling and the pathology of myopathies.


Development | 2007

Zebrafish relatively relaxed mutants have a ryanodine receptor defect, show slow swimming and provide a model of multi-minicore disease

Hiromi Hirata; Takaki Watanabe; Jun Hatakeyama; Shawn M. Sprague; Louis Saint-Amant; Ayako Nagashima; Wilson W. Cui; Weibin Zhou; John Y. Kuwada

Wild-type zebrafish embryos swim away in response to tactile stimulation. By contrast, relatively relaxed mutants swim slowly due to weak contractions of trunk muscles. Electrophysiological recordings from muscle showed that output from the CNS was normal in mutants, suggesting a defect in the muscle. Calcium imaging revealed that Ca2+ transients were reduced in mutant fast muscle. Immunostaining demonstrated that ryanodine and dihydropyridine receptors, which are responsible for Ca2+ release following membrane depolarization, were severely reduced at transverse-tubule/sarcoplasmic reticulum junctions in mutant fast muscle. Thus, slow swimming is caused by weak muscle contractions due to impaired excitation-contraction coupling. Indeed, most of the ryanodine receptor 1b (ryr1b) mRNA in mutants carried a nonsense mutation that was generated by aberrant splicing due to a DNA insertion in an intron of the ryr1b gene, leading to a hypomorphic condition in relatively relaxed mutants. RYR1 mutations in humans lead to a congenital myopathy, multi-minicore disease (MmD), which is defined by amorphous cores in muscle. Electron micrographs showed minicore structures in mutant fast muscles. Furthermore, following the introduction of antisense morpholino oligonucleotides that restored the normal splicing of ryr1b, swimming was recovered in mutants. These findings suggest that zebrafish relatively relaxed mutants may be useful for understanding the development and physiology of MmD.


Development | 2004

accordion, a zebrafish behavioral mutant, has a muscle relaxation defect due to a mutation in the ATPase Ca2+ pump SERCA1.

Hiromi Hirata; Louis Saint-Amant; Julie Waterbury; Wilson W. Cui; Weibin Zhou; Qin Li; Daniel Goldman; Michael Granato; John Y. Kuwada

When wild-type zebrafish embryos are touched at 24 hours post-fertilization (hpf), they typically perform two rapid alternating coils of the tail. By contrast, accordion (acc) mutants fail to coil their tails normally but contract the bilateral trunk muscles simultaneously to shorten the trunk, resulting in a pronounced dorsal bend. Electrophysiological recordings from muscles showed that the output from the central nervous system is normal in mutants, suggesting a defect in muscles is responsible. In fact, relaxation in acc muscle is significantly slower than normal. In vivo imaging of muscle Ca2+ transients revealed that cytosolic Ca2+ decay was significantly slower in acc muscle. Thus, it appears that the mutant behavior is caused by a muscle relaxation defect due to the impairment of Ca2+ re-uptake. Indeed, acc mutants carry a mutation in atp2a1 gene that encodes the sarco(endo)plasmic reticulum Ca2+-ATPase 1 (SERCA1), a Ca2+ pump found in the muscle sarcoplasmic reticulum (SR) that is responsible for pumping Ca2+ from the cytosol back to the SR. As SERCA1 mutations in humans lead to Brody disease, an exercise-induced muscle relaxation disorder, zebrafish accordion mutants could be a useful animal model for this condition.


Development | 2013

Transgenic tools to characterize neuronal properties of discrete populations of zebrafish neurons

Chie Satou; Yukiko Kimura; Hiromi Hirata; Maximiliano L. Suster; Koichi Kawakami; Shin-ichi Higashijima

The developing nervous system consists of a variety of cell types. Transgenic animals expressing reporter genes in specific classes of neuronal cells are powerful tools for the study of neuronal network formation. We generated a wide variety of transgenic zebrafish that expressed reporter genes in specific classes of neurons or neuronal progenitors. These include lines in which neurons of specific neurotransmitter phenotypes expressed fluorescent proteins or Gal4, and lines in which specific subsets of the dorsal progenitor domain in the spinal cord expressed fluorescent proteins. Using these, we examined domain organization in the developing dorsal spinal cord, and found that there are six progenitor domains in zebrafish, which is similar to the domain organization in mice. We also systematically characterized neurotransmitter properties of the neurons that are produced from each domain. Given that reporter gene expressions occurs in a wide area of the nervous system in the lines generated, these transgenic fish should serve as powerful tools for the investigation of not only the neurons in the dorsal spinal cord but also neuronal structures and functions in many other regions of the nervous system.


Nature Communications | 2015

Mutations in SLC12A5 in epilepsy of infancy with migrating focal seizures.

Tommy Stödberg; Amy McTague; Arnaud Ruiz; Hiromi Hirata; Juan Zhen; Philip Long; Irene Farabella; Esther Meyer; Atsuo Kawahara; Grace Vassallo; Stavros Stivaros; Magnus K. Bjursell; Henrik Stranneheim; Stephanie Tigerschiöld; Bengt Persson; Iftikhar Bangash; Krishna B. Das; Deborah Hughes; Nicole Lesko; Joakim Lundeberg; Rod C. Scott; Annapurna Poduri; Ingrid E. Scheffer; Holly Smith; Paul Gissen; Stephanie Schorge; Maarten E. A. Reith; Maya Topf; Dimitri M. Kullmann; Robert J. Harvey

The potassium-chloride co-transporter KCC2, encoded by SLC12A5, plays a fundamental role in fast synaptic inhibition by maintaining a hyperpolarizing gradient for chloride ions. KCC2 dysfunction has been implicated in human epilepsy, but to date, no monogenic KCC2-related epilepsy disorders have been described. Here we show recessive loss-of-function SLC12A5 mutations in patients with a severe infantile-onset pharmacoresistant epilepsy syndrome, epilepsy of infancy with migrating focal seizures (EIMFS). Decreased KCC2 surface expression, reduced protein glycosylation and impaired chloride extrusion contribute to loss of KCC2 activity, thereby impairing normal synaptic inhibition and promoting neuronal excitability in this early-onset epileptic encephalopathy.

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Weibin Zhou

University of Michigan

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Yasumasa Bessho

Nara Institute of Science and Technology

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Sean E. Low

University of Michigan

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