Hrvoje Šarčević

Discriminating maize inbred lines using molecular and DUS data

Growing numbers of candidate varieties, decrease of their variability for morphological traits, and internationalization of the national list all contribute to excessive increase of the trial costs, thus creating the need for the improvement of current variety evaluation procedures, especially regards their distinctness, Uniformity, and Stability (DUS) component. Due to rapid advancement in molecular techniques, the use of molecular markers in DUS testing as a complement to, or replacement of, morphological observations became the subject of great interest in scientific studies, and consequently topic for discussion within International Union for the Protection of New Varieties of Plants (UPOV). In order to explore the potential of simple sequence repeat (SSR) markers for distinctness tests, present study involved set of 41 maize inbred lines that were scored for 32 DUS characters prescribed by UPOV and genotyped at 28 SSR loci. Results were largely in favor of the use of molecular markers, revealing or confirming their already known advantages over morphological markers like better consistency with the pedigree, and relatively higher discriminative power. However, their integration into DUS testing protocols still depends upon resolving of several important issues.

Identification of mega-environments in Europe and effect of allelic variation at maturity E loci on adaptation of European soybean

Soybean cultivation holds great potential for a sustainable agriculture in Europe, but adaptation remains a central issue. In this large mega-environment (MEV) study, 75 European cultivars from five early maturity groups (MGs 000-II) were evaluated for maturity-related traits at 22 locations in 10 countries across Europe. Clustering of the locations based on phenotypic similarity revealed six MEVs in latitudinal direction and suggested several more. Analysis of maturity identified several groups of cultivars with phenotypic similarity that are optimally adapted to the different growing regions in Europe. We identified several haplotypes for the allelic variants at the E1, E2, E3 and E4 genes, with each E haplotype comprising cultivars from different MGs. Cultivars with the same E haplotype can exhibit different flowering and maturity characteristics, suggesting that the genetic control of these traits is more complex and that adaptation involves additional genetic pathways, for example temperature requirement. Taken together, our study allowed the first unified assessment of soybean-growing regions in Europe and illustrates the strong effect of photoperiod on soybean adaptation and MEV classification, as well as the effects of the E maturity loci for soybean adaptation in Europe.

Originality of M3S maize population and changes in allele frequencies revealed by SSR markers after two cycles of selfed progeny recurrent selection

Maksimir 3 Synthetic (M3S) maize population was developed at the Faculty of Agriculture University of Zagreb by intercrossing inbred lines, whose origins trace back to several open-pollinated varieties and local populations from different regions of the former Yugoslavia. The population was subjected to two cycles of selfed progeny recurrent selection for grain yield. The objectives of this study were: (i) to determine genetic distances among the parental inbred lines of the M3S population (M3S progenitors), the M3S population before and after two cycles of recurrent selection, and elite inbred lines representing the BSSS and Lancaster heterotic group; and (ii) to examine the effect of two cycles of recurrent selection on allele frequency changes in the population. Nine M3S progenitors, three BSSS lines, and three Lancaster lines were genotyped at 24 SSR loci, out of which nine randomly chosen loci were used for genotyping 96 individuals from both C0 (the M3S population before selection) and from C2 (M3S population after two cycles of selection). A total of 101 alleles were detected across 24 loci in the 15 lines, whereas 83 alleles were found in the nine M3S progenitors. Among the latter 83 alleles 31 were unique, i.e. found only in one of the progenitors. Mean genetic distance among nine M3S progenitors was 0.61 indicating a broad genetic base of the M3S population. High mean genetic distance was found between M3S progenitors and BSSS lines (0.69) and M3S progenitors and Lancaster lines (0.71). This indicates that the M3S population represents a germplasm source unrelated to both the BSSS and Lancaster germplasm. Mean genetic distance between the M3S population and BSSS as well as Lancaster lines decreased slightly after two cycles of recurrent selection suggesting the need to introduce testers from both groups in future selection in the M3S population in order to maintain heterotic complementarity of the M3S population to these groups. A test of selective neutrality identified several non-neutral loci in the population whose allele frequency changes from the C0 to the C2 cannot be explained by genetic drift. The majority of non-neutral alleles, whose frequency increased after two cycles of selection, were present in at least one line from the BSSS or Lancaster heterotic group.

Genotypic differences for nitrogen use efficiency in winter wheat ( Triticum aestivum L.)

Our results showed that genetic variability for N use efficiency exists in high-yielding winter wheat genotypes even at the lowest N level (N0). Genotypes Renan and Monika reached their maximal yield in the highest N level (N100), while line ZgM1 (also high yielding) reached maximal yield at the lowest N level (N0) without significant increase of yield with additional N inputs. Breeding line ZgM1 is therefore selected as genotype with high nitrogen use efficiency and will be used as the parent in the future crosses.

Improvement of stalk rot resistance and grain yield in the maize synthetic FAOSYNFR1B by recurrent selection

Two cycles of simultaneous selection for stalk rot resistance and grain yield have been conducted in the FAOSYNFR1B population synthesized from Eastern European maize germplasm. The objectives of this study were: 1) to compare expected genetic gain from S 1 and HSI methods of selection in the second cycle and 2) to evaluate improvement (gain) of stalk rot resistance and grain yield in the population per se associated with two cycles of selection. In the first cycle of selection, S 1 method and HSI method (using an inbred tester) were combined (S 1 -HSI) to produce C1 population. In the second cycle of selection the S 1 and HSI methods were applied separately to produce C2(S 1 ) and C2(HSI) populations, respectively. In 1996, the C0, C1, C2(S 1 ), and C2(HSI) populations per se were evaluated at four locations in natural conditions and at one under artificial stalk infection. Combined S 1 -HSI method was successful in improving both stalk rot resistance and grain yield. In the second cycle, further improve...

Response of flue-cured tobacco to reduced fertilization

One of the biggest challenges for the safe maize production is the yield stability in a wide range of environments with different soil fertility, weather conditions, prevailing pests and diseases as well as cultural practices. In order to achieve it, new hybrids with higher tolerance to biotic and abiotic stress are continuously being created. In order to compare performance of maize hybrids in environments with different levels and types of stress, and relate it to the stalk lodging incidence, we compared performance of 64 maize hybrids obtained by crossing 16 inbred lines with four inbred testers in three different environments. Two environments at same location (Rugvica) differed in crop rotation, and the third environment at location Botinec was considered as dry because of low water capacity of the soil. Mixed models that included all design elements and genetic background of hybrids were used to analyze the effect of lodging on yield in different environments. The results show that stalk lodging had a significant effect on yield, but significant lodging x environment interaction indicates that this effect was rather environment specific.Sweet pepper Istra F1 hybrid was grown in a greenhouse on K rich soil. For evaluation of K antagonism, two K rates (55 and 85 kg ha-1) were applied in a randomized complete block design with four replications. Total number of fruits, total number of BER affected fruits as well as average fruit mass were recorded for each harvest. Fruit and leaf K and Ca content were determined at three plant growth stages (at the stage of the first, third and fifth fruit cluster). Higher K rate gave higher : average fruit mass (169.45 g), total number of fruits per plant (7.95), number of BER affected fruits per plant (3.82), K in leaves (5.44% DM), K in fruits (6.35% DM), but negatively correlated with Ca concentration in fruits (0.57% DM) and leaves (3.24% DM). This resulted in decreased marketable yield of sweet pepper fruits.

Stalk rot resistance in Maksimir 3 synthetic maize population after four cycles of recurrent selection

Fusarium stalk rot (FSR) and anthracnose stalk rot (ASR), caused by Fusarium spp. and Colletotrichum graminicola (Ces.) G.W. Wils. respectively, are the two most important stalk diseases in maize which increase the incidence of stalk lodging and reduce grain yield. The aim of the present study was to (1) evaluate the effect of four cycles of recurrent selection in the Maksimir 3 Synthetic (M3S) maize population on ASR and FSR resistance and (2) to investigate the correlation among the different disease rating methods. The experiment included six M3S cycle populations per se and their test-crosses with a single cross hybrid. ASR resistance was estimated on artificially inoculated plant rows using three ratings (the number of infected internodes, the number of internodes rotten more than 75% and evaluation of outer stalk discoloration) whereas FSR resistance was estimated in artificially inoculated rows as well as in naturally inoculated rows by rating severity of disease symptoms on longitudinally cut stalks using the standard resistance scale. The results of the present study showed that four cycles of selection in the M3S maize population, conducted primarily for grain yield improvement, did not significantly affect its resistance to both ASR and FSR. Among the disease ratings a moderate positive correlation was found only between two ASR resistance ratings (the number of infected internodes and the number of internodes rotted more than 75%) in both population per se (r=0.49**) and population test-crosses (r=0.56**).

Latest results in breeding winter wheat for resistance to Fusarium Head Blight in the Zagreb Bc Institute

Latest results in breeding winter wheat for resistance to Fusarium Head Blight in the Zagreb Bc Institute Fusarium head blight (Fusarium graminearum Schw.) is one of the most dangerous fungal diseases in wheat production decreasing grain yield up to 50% or more what depends on both environmental factors and genotype. Testing of inoculated artificially new Bc winter wheat lines for their resistance to FHB was the objective of the study. In 2008 and 2009 two and five lines of tested 12 new ones respectively were shown to be more resistant than Sana cultivar used as a standard. Majority of the winter wheat lines exceeded level of resistance standing out by Bc 7 and Bc 1 and Bc Lira variety as the highest yielding variety was registered by CCVR in 2009.

Modeling yield performance of various hybrid combinations in different environmental conditions

One of the biggest challenges for the safe maize production is the yield stability in a wide range of environments with different soil fertility, weather conditions, prevailing pests and diseases as well as cultural practices. In order to achieve it, new hybrids with higher tolerance to biotic and abiotic stress are continuously being created. In order to compare performance of maize hybrids in environments with different levels and types of stress, and relate it to the stalk lodging incidence, we compared performance of 64 maize hybrids obtained by crossing 16 inbred lines with four inbred testers in three different environments. Two environments at same location (Rugvica) differed in crop rotation, and the third environment at location Botinec was considered as dry because of low water capacity of the soil. Mixed models that included all design elements and genetic background of hybrids were used to analyze the effect of lodging on yield in different environments. The results show that stalk lodging had a significant effect on yield, but significant lodging x environment interaction indicates that this effect was rather environment specific.Sweet pepper Istra F1 hybrid was grown in a greenhouse on K rich soil. For evaluation of K antagonism, two K rates (55 and 85 kg ha-1) were applied in a randomized complete block design with four replications. Total number of fruits, total number of BER affected fruits as well as average fruit mass were recorded for each harvest. Fruit and leaf K and Ca content were determined at three plant growth stages (at the stage of the first, third and fifth fruit cluster). Higher K rate gave higher : average fruit mass (169.45 g), total number of fruits per plant (7.95), number of BER affected fruits per plant (3.82), K in leaves (5.44% DM), K in fruits (6.35% DM), but negatively correlated with Ca concentration in fruits (0.57% DM) and leaves (3.24% DM). This resulted in decreased marketable yield of sweet pepper fruits.

Comparing estimates of variances and correlations for two recurrent selection methods in the maize synthetic FAOSYNFR1B

The objective of this study was to compare estimates of variances and correlations for S1 and HSI methods in the second cycle of recurrent selection in the FAOSYNFR1B synthetic for stalk rot resistance and grain yield. We compared estimates of variance and correlations for S1 and HSI methods in the second cycle of recurrent selection in the maize synthetic FAOSYNFR1B for stalk rot resistance and grain yield when the components were re-estimated with restricted maximum likelihood (REML) method. There were some differences between variance components estimated by REML analysis and ANOVA due to adjusting of estimates in extended random model and by re-estimating the other variances because of some negative estimates. There was no either phenotypic or genotypic correlation between the two traits for the S1 method, while the both correlations for the HSI method were negative and very weak. The estimates of phenotypic and genotypic correlations were similar for both selection methods indicating that phenotypic correlations could alone accurately reflect expected correlated responses between the traits when sample size is relatively large.