I. V. Goldenkova-Pavlova
Russian Academy of Sciences
Network
Latest external collaboration on country level. Dive into details by clicking on the dots.
Publication
Featured researches published by I. V. Goldenkova-Pavlova.
Russian Journal of Plant Physiology | 2007
R. Maali-Amiri; I. V. Goldenkova-Pavlova; N. O. Yur’eva; V. P. Pchelkin; V. D. Tsydendambaev; A. G. Vereshchagin; A. N. Deryabin; T. I. Trunova; Dmitry A. Los; A. M. Nosov
Potato (Solanum tuberosum L.) plants were transformed with the desA gene encoding Δ12 acyl-lipid desaturase in the cyanobacterium Synechocystis sp. PCC 6803. To evaluate the efficiency of this gene expression in the plant, its sequence was translationally fused with the sequence of the reporter gene encoding thermostable lichenase. A comparison of native and hybrid gene expression showed that lichenase retained its activity and thermostability within the hybrid protein, whereas desaturase retained its capability of inserting the double bond in fatty acid (FA) chains and, thus, to modify their composition in membrane lipids. In most transformed plants, shoots contained higher amounts of polyunsaturated FAs, linoleic and linolenic (by 39–73 and 12–41%, respectively). The total absolute content of unsaturated FAs was also higher in transformants by 20–42% as compared to wild-type plants. When transformed plants were severely cooled (to −7°C), the rate of their membrane lipid peroxidation was not enhanced, whereas in wild-type plants, it increased substantially (by 25%) under such conditions. These results could indicate a higher tolerance of transformed plants to low temperatures and the oxidative stress induced by hypothermia.
Journal of Integrative Plant Biology | 2010
Reza Amiri; Natalia O. Yur’eva; Khristina R. Shimshilashvili; I. V. Goldenkova-Pavlova; Vasiliy P. Pchelkin; Elmira I. Kuznitsova; V. D. Tsydendambaev; T. I. Trunova; Dmitry A. Los; Gholamreza Salehi Jouzani; Alexander M. Nosov
We report the expression profile of acyl-lipid Delta12-desaturase (desA) gene from Synechocystis sp. PCC6803 and its effect on cell membrane lipid composition and cold tolerance in prokaryotic (Escherichia coli) and eukaryotic (Solanum tuberosum) cells. For this purpose, a hybrid of desA and reporter gene encoding thermostable lichenase (licBM3) was constructed and used to transform these cells. The expression of this hybrid gene was measured using qualitative (Petri dish test, electrophoregram and zymogram) and quantitative methods (spectrometry and gas liquid chromatography assays). The maximum level of linoleic acid in the bacterial cells containing hybrid gene was 1.9% of total fatty acids. Cold stress tolerance assays using plant damage index and growth parameters showed that cold tolerance was enhanced in primary transgenic lines because of increased unsaturated fatty acid concentration in their lipids. The greatest content of 18:2 and 18:3 fatty acids in primary transgenic plants was observed for lines 2 (73%) and 3 (41%). Finally, our results showed that desaturase could enhance tolerance to cold stress in potato, and desaturase and lichenase retain their functionality in the structure of the hybrid protein where the enzymatic activity of target gene product was higher than in the case of reporter lichenase gene absence in the construction.
Russian Journal of Genetics | 2012
A. O. Vyacheslavova; I. N. Berdichevets; A. A. Tyurin; Kh. R. Shimshilashvili; O. N. Mustafaev; I. V. Goldenkova-Pavlova
The basic methods used in current practice for stable and transient expression of heterologous genes in plants are presented and compared. The key areas of research in the heterologous expression of genes in plants have been identified by analyzing literature and experimental data: modeling of metabolic pathways; creation of marker-free transgenic plants; the search for new regulatory elements and plant genes influencing the efficiency of expression of heterologous genes in plants; development of new methods for analyzing of transgenic plants and new approaches to the expression of heterologous genes in plants.
Russian Journal of Genetics | 2007
R. Maali; H. R. Schimschilaschvili; V. P. Pchelkin; V. D. Tsydendambaev; A. M. Nosov; Dmitry A. Los; I. V. Goldenkova-Pavlova
Expression of the desC gene coding for acyl-lipid Δ9 desaturase of thermophilic cyanobacterium Synechocystis sp. PCC6803 was studied in Escherichia coli cells. In a hybrid gene constructed (desC-licBM3), a sequence of the native acyl-lipid Δ9 desaturase was fused in frame with the reporter gene coding for thermostable lichenase. Lichenase contained in the hybrid protein simplified selection and analysis of the expression of membrane desaturase in the heterologous host. Comparisons of the expression for the native and hybrid genes in bacterial cells showed that lichenase remained active and thermostable in the hybrid protein, while desaturase retains the capability of introducing a double bound in the corresponding position of fatty acid residues.
Biochimica et Biophysica Acta | 2015
А.А. Tyurin; N.S. Sadovskaya; Kh.R. Nikiforova; О.N. Mustafaev; R.A. Komakhin; V.S. Fadeev; I. V. Goldenkova-Pavlova
The Clostridium thermocellum lichenase (endo-β-1,3;1,4-glucan-D-glycosyl hydrolase) displays a high thermostability and specific activity and has a compact protein molecule, which makes it attractive, in particular, for protein engineering. We have utilized in silico analysis to construct circularly permuted (CP) variants and estimated the retained activity and thermostability. New open termini in the region of residues 53 or 99 in two lichenase CP variants (CN-53 and CN-99) had no effect on their activity and thermal tolerance versus another variant CP variant, CN-140 (cut in the region of residue 140), which displayed a dramatic decrease in the activity and thermostability. Construction and further activity and thermostability testing of the modified lichenase variants (M variants) and CP variants with peptides integrated via insertion fusion have demonstrated that the N-terminal regions in the lichenase catalytic domain (53 and 99 amino acid residues) that permit circular permutations with retention of activity and thermostability of the enzyme as well as the region between the C and N termini of the native lichenase in thermostable and active lichenase variants (CN-53 and CN-99) may be used for integrating small peptides without the loss of activity and thermostability. These findings not only suggest that CP predictions can be used in search for internal integration sites within protein molecule, but also form the background for further enzymatic engineering of the C. thermocellum thermostable lichenase aiming to create new fusion proteins.
Russian Journal of Genetics | 2010
R. A. Komakhin; V. V. Komakhina; N. A. Milyukova; I. V. Goldenkova-Pavlova; O. A. Fadina; A. A. Zhuchenko
Homologous DNA recombination in eukaryotes is necessary to maintain genome stability and integrity and for correct chromosome segregation and formation of new haplotypes in meiosis. At the same time, genetic determination and nonrandomness of meiotic recombination restrict the introgression of genes and generation of unique genotypes. As one of the approaches to study and induce meiotic recombination in plants, it is recommended to use the recA gene of Escherichia coli. It is shown that the recA and NLS-recAlicBM3 genes have maternal inheritance and are expressed in the progeny of transgenic tomato plants. Plants expressing recA or NLS-recA-licBM3 and containing one T-DNA insertion do not differ in pollen fertility from original nontransgenic forms and can therefore be used for comparative studies of the effect of bacterial recombinases on meiotic recombination between linked genes.
Cytology and Genetics | 2007
I. V. Goldenkova-Pavlova; N. Mirakhorli; A. R. Maali; E. Isaenko; N. A. Kartel; N. O. Yur’eva; I. A. Abdeeva
Experimental models of primary potato transgenic plants that express the cry3aM-licBM2 hybrid gene were created. The molecular analysis and biotests of the experimental models allow a new system of cry genes expression in plants to be proposed. This system is based on the expression of hybrid genes containing the reporter lichenase gene sequence and the use of a light-induced promoter ensuring preferential expression of the regulated genes only in green plant tissues (leaves), the target tissues for pests, as a regulatory element. In is shown that the presence of lichenase in hybrid proteins facilitates selection and analysis of the level of expression of hybrid proteins in transgenic plants. Judging by the properties of the reporter protein lichenase in hybrid proteins, it seems possible to use this reporter system for transgene monitoring in agrocenosis, because this system is fairly simple and precise and does not need considerable material and time expenses.
Russian Journal of Genetics | 2012
A. O. Vyacheslavova; O. N. Mustafaev; A. A. Tyrin; Kh. R. Shimshilashvili; I. N. Berdichevets; D. M. Shayakhmetova; M. A. Goldenkov; V. S. Fadeev; Yu. V. Sheludko; I. V. Goldenkova-Pavlova
A set of module vectors for stable or transient gene expression in plants was constructed with regard to the majority of factors ensuring efficient heterologous gene expression in plants. The vectors are convenient to clone new regulatory elements and genes of interest via simple molecular cloning procedures. The vectors can be used to obtain transgenic plants with stable heterologous gene expression as well as to achieve transient expression because one vector includes the gene for the tomato bushy stunt virus p19 protein, which acts as a suppressor of posttranscriptional gene silencing.
Russian Journal of Plant Physiology | 2015
I. M. Gerasymenko; L. A. Sakhno; T. N. Kyrpa; A. M. Ostapchuk; T. A. Hadjiev; I. V. Goldenkova-Pavlova; Y. V. Sheludko
We established transgenic lines of Nicotiana tabacum expressing hybrid genes of Synechocystis sp. PCC 6803 Δ12 (desA) acyllipid desaturase and Synechococcus vulcanus Δ9 (desC) acyllipid desaturase with or without sequence coding for transit peptide of Rubisco small subunit of Arabidopsis thaliana under control of a constitutive promoter. Reliable increase of linoleic acid portion (C18:2; Δ9,12) accompanied with decrease of α-linolenic acid (C18:3; Δ9,12,15) relative amount was detected for plants expressing hybrid desA::licBM3 gene. No reliable changes were detected in fatty acid profiles and unsaturation index of plants transformed with Δ9 desaturase gene desC::licBM3 lacking signals of intracellular targeting while expression of this gene with Arabidopsis thaliana Rubisco small subunit transit peptide sequence caused growth of C18:3 α-linolenic acid part simultaneously with reduction of C18:2 linoleic acid part, as well as increase of unsat-uration index. No changes in relative amount of Δ9-monounsaturated fatty acids were observed in any of studied lines. All plants expressing desaturase genes exhibited enhanced levels of superoxide dismutase (SOD) activity after cold treatment in contrast to control lines with suppressed SOD activity after cold treatment.
Russian Journal of Plant Physiology | 2014
N. O. Yur’eva; S. N. Kirsanova; L. N. Kukushkina; V. P. Pchelkin; G. I. Sobol’kova; Kh.R. Nikiforova; I. V. Goldenkova-Pavlova; A. M. Nosov; V. D. Tsydendambaev
Transgenic (DesA-LicBM3) potato (Solanum tuberosum L., cv. Desnitsa) plants expressing gene encoding Δ12 acyl-lipid desaturase from Synechosystis sp. PCC 6803 were obtained. A significant increase in the relative content of polyunsaturated (linoleic and linolenic) fatty acids in transformants as compared with original genotype was demonstrated. The improved resistance of transgenic plants to late blight causal agent (Phytophthora infestans) as compared with original cultivar was observed.