Ilke Pala-Ozkok
Istanbul Technical University
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Featured researches published by Ilke Pala-Ozkok.
Bioresource Technology | 2013
Tugce Katipoglu-Yazan; Ilke Pala-Ozkok; Emine Ubay-Cokgor; Derin Orhon
The study evaluated acute impact of erythromycin and tetracycline on nitrification and organic carbon removal kinetics in mixed microbial culture. Acclimated biomass was obtained from a fill and draw reactor fed with peptone mixture selected as synthetic substrate and operated at a sludge age of 10 days. Acute inhibition was tested in batch reactors involving a control unit started solely with substrate and the others with additional doses of each antibiotic. Modeling indicated that both steps of nitrification were totally blocked by erythromycin. Tetracycline inhibited and retarded nitrification kinetics at 50 mg/L and stopped nitrite oxidation at 200 mg/L, leading to nitrite accumulation. Both antibiotics also affected organic carbon removal by inducing partial inactivation of the heterotrophic community in the culture, increased substrate storage and accelerated endogenous respiration, with a relatively slight impact on heterotrophic growth. Major inhibitory effect was on process stoichiometry, leading to partial utilization of organic substrate.
Bioresource Technology | 2012
Ilke Pala-Ozkok; Ateequr Rehman; Nevin Yagci; Emine Ubay-Cokgor; Daniel Jonas; Derin Orhon
The study focused on variable kinetics for substrate utilization, primarily addressing the following issue: Is variable process kinetics observed under different operating conditions and culture history (sludge ages), the result of changes inflicted on the metabolic machinery of the same microbial culture? Or, is this the result of a different microbial population selected under different operating conditions? For this purpose, the study mainly emphasized to assess the microbial population composition sustained at different sludge ages. It explored the relationship between observed process kinetics and microbial population structure using respirometric modeling and high-throughput sequencing of 16S rRNA gene. Experimental results indicated a significant change in the composition of the microbial community fed with the same organic substrate, when the culture history was changed, lower sludge age selecting a different and faster growing microbial community.
Bioresource Technology | 2013
Ilke Pala-Ozkok; Ateequr Rehman; Gokce Kor-Bicakci; Aslihan Ural; Markus Schilhabel; Emine Ubay-Cokgor; Daniel Jonas; Derin Orhon
The study addressed acetate utilization by an acclimated mixed microbial culture under different growth conditions. It explored changes in the composition of the microbial community and variable process kinetics induced by different culture history. Sequencing batch reactors were operated at steady-state at different sludge ages of two and ten days. Microbial population structure was determined using high-throughput sequencing of 16S rRNA genes. Parallel batch experiments were conducted with acclimated biomass for respirometric analyses. A lower sludge age sustained a different community, which also reflected as variable kinetics for microbial growth and biopolymer storage. The maximum growth rate was observed to change from 3.9/d to 8.5/d and the substrate storage rate from 3.5/d to 5.9/d when the sludge age was decreased from 10 d to 2.0 d. Results challenge the basic definition of heterotrophic biomass in activated sludge models, at least by means of variable kinetics under different growth conditions.
Bioresource Technology | 2014
Gokce Kor-Bicakci; Ilke Pala-Ozkok; Ateequr Rehman; Daniel Jonas; Emine Ubay-Cokgor; Derin Orhon
The study evaluated the chronic impact of sulfamethoxazole on metabolic activities of fast growing microbial culture. It focused on changes induced on utilization kinetics of acetate and composition of the microbial community. The experiments involved a fill and draw reactor, fed with acetate and continuous sulfamethoxazole dosing of 50 mg/L. The evaluation relied on model evaluation of the oxygen uptake rate profiles, with parallel assessment of microbial community structure by 454-pyrosequencing. Continuous sulfamethoxazole dosing inflicted a retardation effect on acetate utilization in a way commonly interpreted as competitive inhibition, blocked substrate storage and accelerated endogenous respiration. A fraction of acetate was utilized at a much lower rate with partial biodegradation of sulfamethoxazole. Results of pyrosequencing with a replacement mechanism within a richer more diversified microbial culture, through inactivation of vulnerable fractions in favor of species resistant to antibiotic, which made them capable of surviving and competing even with a slower metabolic response.
Bioresource Technology | 2014
Seval Sözen; Emine Ubay Cokgor; S. Teksoy Başaran; M. Aysel; A. Akarsubaşı; I. Ergal; Halil Kurt; Ilke Pala-Ozkok; Derin Orhon
The study investigated the effect of high substrate loading on substrate utilization kinetics, and changes inflicted on the composition of the microbial community in a superfast submerged membrane bioreactor. Submerged MBR was sequentially fed with a substrate mixture and acetate; its performance was monitored at steady-state, at extremely low sludge age values of 2.0, 1.0 and 0.5d, all adjusted to a single hydraulic retention time of 8.0 h. Each MBR run was repeated when substrate feeding was increased from 200 mg COD/L to 1000 mg COD/L. Substrate utilization kinetics was altered to significantly lower levels when the MBR was adjusted to higher substrate loadings. Molecular analysis of the biomass revealed that variable process kinetics could be correlated with parallel changes in the composition of the microbial community, mainly by a replacement mechanism, where newer species, better adapted to the new growth conditions, substituted others that are washed out from the system.
Bioresource Technology | 2016
Gokce Kor-Bicakci; Ilke Pala-Ozkok; Aslihan Ural; Daniel Jonas; Derin Orhon; Emine Ubay-Cokgor
The study evaluated impact of sulfamethoxazole on acetate utilization kinetics and microbial community structure using respirometric analysis and pyrosequencing. A fill and draw reactor fed with acetate was sustained at a sludge age of 10 days. Acute impact was assessed by modeling of respirometric data in batch reactors started with sulfamethoxazole doses in the range of 25-200 mg/L. Fill and draw operation resumed with continuous sulfamethoxazole dosing of 50 mg/L and the chronic impact was evaluated with acclimated biomass after 20 days. Acute impact revealed higher maintenance energy requirements, activity reduction and slight substrate binding. Chronic impact resulted in retardation of substrate storage. A fraction of acetate was utilized at a much lower rate with partial biodegradation of sulfamethoxazole by the acclimated biomass. Pyrosequencing indicated that Amaricoccus sp. and an unclassified Bacteroidetes sp., possibly with the ability to co-metabolize sulfamethoxazole, dominated the community.
Desalination and Water Treatment | 2015
Seval Sözen; Ilke Pala-Ozkok; Merve Aysel; Senem Teksoy-Başaran; A. Akarsubaşı; I. Ergal; Halil Kurt; Emine Ubay-Cokgor; Derin Orhon
AbstractThe study investigated the effect of sludge age on substrate utilization kinetics, soluble microbial product generation, and composition of the microbial community sustained in a superfast submerged membrane bioreactor (SSMBR). For this purpose, a laboratory-scale membrane bioreactors (MBR) unit was operated at steady state, with three different sludge ages in extremely low range of 0.5–2.0 d, and a hydraulic retention time of 8.0 h. Substrate feeding was adjusted to 220–250 mg COD/L and involved a synthetic mixture representing the readily biodegradable COD fraction in domestic sewage. The MBR operation at sludge age of 1.0 d was duplicated with acetate feeding as the sole organic carbon source. Under different operating conditions, SSMBR was able to secure complete removal of available soluble/readily biodegradable substrate, with a residual microbial product level as low as 20–30 mg COD/L, partly retained and accumulated in reactor volume. Phylogenic analysis based on polymerase chain reactions...
Bioresource Technology | 2014
Yester Biros; Emine Ubay Cokgor; Nevin Yagci; Ilke Pala-Ozkok; Zeynep Petek Çakar; Seval Sözen; Derin Orhon
The study investigated the effect of variations in the acetate to biomass ratio on substrate storage potential, and the kinetics of substrate utilization. A series of batch experiments were conducted with biomass taken from the fill and draw reactor operated at a sludge age of 2 d. One of the batch reactors duplicated the substrate loading in the main reactor. The others were started with different initial acetate to biomass ratios both in lower and higher ranges. Increasing available acetate did not totally divert excess substrate to storage; the microbial culture adjusted the kinetics of the metabolic reactions to a higher growth rate so that more substrate could be utilized for direct growth at high acetate levels. Conversely, storage rate was increased, utilizing a higher substrate fraction for polyhydroxybutyrate generation when acetate concentration was lowered. The physiological and molecular bases of storage at low substrate levels were discussed.
Environmental Technology | 2018
Gulsum Emel Zengin; Ilke Pala-Ozkok; Didem Okutman Tas; Cigdem Yangin-Gomec; Mahmut Altinbas; Emine Ubay Cokgor
ABSTRACT Ultrasonication-assisted sludge digestion technology is a lately used alternative sludge treatment method in wastewater treatment plants (WWTPs). This study focused on determining the influence of ultrasonication on aerobic and anaerobic sludge digestion, two most commonly used sludge handling processes, as well as on the investigation of microbial community structure after digestion. The effect of ultrasonication as a pre-treatment technique prior to sludge digestion on microbial population dynamics was not yet investigated comprehensively. Sludge sample taken from the primary and secondary settling tanks of a domestic wastewater treatment plant was used during the experiments. Based on the relevant data, while applied ultrasonication did not improve the anaerobic digestion efficiency, progress was achieved in the sludge dewaterability characteristics at the end of aerobic digestion. According to the results of both denaturant gradient gel electrophoresis and pyrosequencing data, ultrasonic pre-treatment decreased the richness of the microbial population in aerobic digestion, whereas increased the biocomplexity of the population in anaerobic digestion. We revealed that sludge pre-treatment with ultrasonication does not always improve the digestion performance. Composition of the sludge was the main factor defining the digestion performance. GRAPHICAL ABSTRACT
Environmental Technology | 2018
Ilke Pala-Ozkok; Gokce Kor-Bicakci; Emine Ubay Cokgor; Daniel Jonas; Derin Orhon
ABSTRACT Enhanced endogenous respiration was observed as the significant/main response of the aerobic microbial culture under pulse exposure to antibiotics: sulfamethoxazole, tetracycline and erythromycin. Peptone mixture and acetate were selected as organic substrates to compare the effect of complex and simple substrates. Experiments were conducted with microbial cultures acclimated to different sludge ages of 10 and 2 days, to visualize the effect of culture history. Evaluation relied on modeling of oxygen uptake rate profiles, reflecting the effect of all biochemical reactions associated with substrate utilization. Model calibration exhibited significant increase in values of endogenous respiration rate coefficient with all antibiotic doses. Enhancement of endogenous respiration was different with antibiotic type and initial dose. Results showed that both peptone mixture and acetate cultures harbored resistance genes against the tested antibiotics, which suggests that biomass spends cellular maintenance energy for activating the required antibiotic resistance mechanisms to survive, supporting higher endogenous decay rates. Abbreviations: : maximum growth rate for XH (day−1); KS: half saturation constant for growth of XH (mg COD/L); bH: endogenous decay rate for XH (day−1); kh: maximum hydrolysis rate for SH1 (day−1); KX: hydrolysis half saturation constant for SH1(mg COD/L); khx: maximum hydrolysis rate for XS1 (day−1); KXX: hydrolysis half saturation constant for XS1 (mg COD/L); kSTO: maximum storage rate of PHA by XH (day−1); : maximum growth rate on PHA for XH (day−1); KSTO: half saturation constant for storage of PHA by XH (mg COD/L); XH1: initial active biomass (mg COD/L)