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Featured researches published by Irina Thiry.


BMC Biotechnology | 2010

Immunohistochemical detection of transgene expression in the brain using small epitope tags.

Evy Lobbestael; Veerle Reumers; Abdelilah Ibrahimi; Kirsten Paesen; Irina Thiry; Rik Gijsbers; Chris Van den Haute; Zeger Debyser; Veerle Baekelandt; Jean-Marc Taymans

BackgroundIn vivo overexpression of proteins is a powerful approach to study their biological function, generate disease models or evaluate gene therapy approaches. In order to investigate an exogenously expressed protein, specific and sensitive detection is essential. Unfortunately, antibodies that allow histological detection of the protein of interest are not always readily available. The use of an epitope tag fused to the protein can circumvent this problem as well as provide the possibility to discriminate endogenous from overexpressed proteins. In order to minimize impact on the bioactivity and biodistribution of the overexpressed protein, preference is given to small tags.ResultsIn the present study, we evaluated several small epitope tags together with corresponding anti-tag antibodies for the detection of overexpressed proteins in rat brain, using eGFP as a reference. We generated several lentiviral vectors encoding eGFP with different N-terminally fused small epitope tags (AU1, flag, 3flag, HA, myc and V5). After confirmation of their functionality in cell culture, we injected these lentiviral vectors stereotactically into the striatum of rats and prepared paraformaldehyde fixed floating sections for immunohistochemical analysis. Using multiple antibodies and antibody dilutions per epitope tag, we extensively assessed the efficiency of several anti-tag antibodies for chromogenic immunohistochemical detection of the epitope tagged eGFPs by determining the proportion of immunoreactivity detected by anti-tag antibodies compared to anti-GFP antibody. Using fluorescence immunohistochemistry and confocal microscopy, we also quantified the proportion of eGFP-positive cells detected by anti-tag antibodies. Our results show that all the examined small epitope tags could be detected by anti-tag antibodies both in cell extracts as well as in vivo, although to varying degrees depending on the tag and antibody used. Using the presented protocol, V5/anti-V5 and HA/HA11 tag/antibody combinations provided the most sensitive detection in brain tissue. We confirmed the applicability of these optimized in vivo tag detection conditions for a difficult to detect protein, firefly luciferase (fLuc), using lentiviral vector constructs expressing V5 tagged and 3flag tagged fLuc protein.ConclusionsWe show here that several small epitope tags are useful for immunohistochemical detection of exogenous proteins in vivo. Our study also provides a generic methodology which is broadly applicable for the detection of overexpressed transgenes in mammalian brain tissue.


Neurobiology of Disease | 2014

Bioluminescence imaging of stroke-induced endogenous neural stem cell response

Caroline Vandeputte; Veerle Reumers; Sarah-Ann Aelvoet; Irina Thiry; Sylvie De Swaef; Chris Van den Haute; Jesús Pascual-Brazo; Tracy D. Farr; Greetje Vande Velde; Mathias Hoehn; Uwe Himmelreich; Koen Van Laere; Zeger Debyser; Rik Gijsbers; Veerle Baekelandt

Brain injury following stroke affects neurogenesis in the adult mammalian brain. However, a complete understanding of the origin and fate of the endogenous neural stem cells (eNSCs) in vivo is missing. Tools and technology that allow non-invasive imaging and tracking of eNSCs in living animals will help to overcome this hurdle. In this study, we aimed to monitor eNSCs in a photothrombotic (PT) stroke model using in vivo bioluminescence imaging (BLI). In a first strategy, inducible transgenic mice expressing firefly luciferase (Fluc) in the eNSCs were generated. In animals that received stroke, an increased BLI signal originating from the infarct region was observed. However, due to histological limitations, the identity and exact origin of cells contributing to the increased BLI signal could not be revealed. To overcome this limitation, we developed an alternative strategy employing stereotactic injection of conditional lentiviral vectors (Cre-Flex LVs) encoding Fluc and eGFP in the subventricular zone (SVZ) of Nestin-Cre transgenic mice, thereby specifically labeling the eNSCs. Upon induction of stroke, increased eNSC proliferation resulted in a significant increase in BLI signal between 2days and 2weeks after stroke, decreasing after 3months. Additionally, the BLI signal relocalized from the SVZ towards the infarct region during the 2weeks following stroke. Histological analysis at 90days post stroke showed that in the peri-infarct area, 36% of labeled eNSC progeny differentiated into astrocytes, while 21% differentiated into mature neurons. In conclusion, we developed and validated a novel imaging technique that unequivocally demonstrates that nestin(+) eNSCs originating from the SVZ respond to stroke injury by increased proliferation, migration towards the infarct region and differentiation into both astrocytes and neurons. In addition, this new approach allows non-invasive and specific monitoring of eNSCs over time, opening perspectives for preclinical evaluation of candidate stroke therapeutics.


Human Gene Therapy | 2007

Comparative Analysis of Adeno-Associated Viral Vector Serotypes 1, 2, 5, 7, And 8 in Mouse Brain

Jean-Marc Taymans; Luk H. Vandenberghe; Chris Van den Haute; Irina Thiry; Christophe Deroose; Luc Mortelmans; James M. Wilson; Zeger Debyser; Veerle Baekelandt


Human Gene Therapy | 2009

Highly Efficient Multicistronic Lentiviral Vectors with Peptide 2A Sequences

Abdelilah Ibrahimi; Greetje Vande Velde; Veerle Reumers; Jaan Toelen; Irina Thiry; Caroline Vandeputte; Sofie Vets; Christophe Deroose; Guy Bormans; Veerle Baekelandt; Zeger Debyser; Rik Gijsbers


Archive | 2014

Bioluminescence Imaging of Stroke-1 Induced Endogenous Neural Stem

Caroline Vandeputte; Veerle Reumers; Sarah-Ann Aelvoet; Irina Thiry; Sylvie De Swaef; Chris Van Den Haute; Jesús Pascual-Brazo; Tracy D. Farr; Greetje Vande Velde; Mathias Hoehn; Uwe Himmelreich; Koen Van Laere; Zeger Debyser; Rik Gijsbers; Veerle Baekelandt; Leuven Viral


Archive | 2010

Conditional viral vectors for specific labeling and noninvasive imaging of endogenous neural stem cells in mouse brain

Veerle Reumers; Rik Gijsbers; Abdelilah Ibrahimi; Sarah-Ann Aelvoet; Sylvie De Swaef; Irina Thiry; Chris Van Den Haute; Zeger Debyser; Veerle Baekelandt


Archive | 2010

Specific labeling and noninvasive imaging of adult endogenous neural stem cells using conditional viral vectors

Veerle Reumers; Rik Gijsbers; Abdelilah Ibrahimi; Sarah-Ann Aelvoet; Sylvie De Swaef; Irina Thiry; Chris Van den Haute; Zeger Debyser; Veerle Baekelandt


Archive | 2009

Conditional viral vectors for specific labeling and noninvasive imaging of neuronal cell populations in mouse brain

Veerle Reumers; Rik Gijsbers; Abdelilah Ibrahimi; Greetje Vande Velde; Jaan Toelen; Sarah-Ann Aelvoet; Sylvie De Swaef; Irina Thiry; Chris Van Den Haute; Zeger Debyser; Veerle Baekelandt


Archive | 2009

Optical imaging in experimental models of Parkinson's disease

Veerle Reumers; Abdelilah Ibrahimi; Rik Gijsbers; Greetje Vande Velde; Anke Van der Perren; Jaan Toelen; Sarah-Ann Aelvoet; Irina Thiry; Sylvie De Swaef; Chris Van den Haute; Zeger Debyser; Veerle Baekelandt


Archive | 2008

Efficient co-expression of multiple imaging reporters in rodent brain using multicistronic lentivectors

Greetje Vande Velde; Abdelilah Ibrahimi; Irina Thiry; Veerle Reumers; Caroline Vandeputte; Christophe Deroose; Veerle Baekelandt; Zeger Debyser; Rik Gijsbers

Collaboration


Dive into the Irina Thiry's collaboration.

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Veerle Baekelandt

Katholieke Universiteit Leuven

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Zeger Debyser

Katholieke Universiteit Leuven

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Rik Gijsbers

Katholieke Universiteit Leuven

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Veerle Reumers

Katholieke Universiteit Leuven

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Abdelilah Ibrahimi

Katholieke Universiteit Leuven

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Chris Van den Haute

Katholieke Universiteit Leuven

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Christophe Deroose

Katholieke Universiteit Leuven

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Greetje Vande Velde

Katholieke Universiteit Leuven

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Sylvie De Swaef

Katholieke Universiteit Leuven

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Caroline Vandeputte

Katholieke Universiteit Leuven

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