Isabella Grishkan

Spatiotemporal diversity of filamentous fungi in the hypersaline Dead Sea

To investigate the spatial and temporal diversity in the fungal community of the Dead Sea, we collected Dead Sea water samples at eight near-shore localities and at different stations offshore over a 1-year period (1999–2000). In addition, depth profiles were sampled at a deep station (304 m) in the centre of the sea. In the course of the study we obtained 476 isolates, comprising 38 species from 19 genera of Oomycota (1), Zygomycota (2), Ascomycota (13), and mitosporic fungi (3). This brings the total number of species recovered from the Dead Sea to 55. Approximately 43% of the isolates belonged to the genera Aspergillus and Eurotium . Most of the species found appeared only in winter. Fungal diversity increased near the outlets of less saline springs near the shore. The species Aspergillus terreus, A. sydowii, A. versicolor, Eurotium herbariorum, Penicillium westlingii, Cladosporium cladosporoides and C. sphaerospermum were isolated consistently and probably form a stable core of the community. The results suggest that a remarkably diverse fungal diversity may be found in the hypersaline Dead Sea waters. To what extent the fungal diversity recovered was present as dormant spores or as vegetative mycelia remains to be determined.

Adaptive Melanin Response of the Soil Fungus Aspergillus niger to UV Radiation Stress at “Evolution Canyon”, Mount Carmel, Israel

Background Adaptation is an evolutionary process in which traits in a population are tailored by natural selection to better meet the challenges presented by the local environment. The major discussion relating to natural selection concerns the portraying of the cause and effect relationship between a presumably adaptive trait and selection agents generating it. Therefore, it is necessary to identify trait(s) that evolve in direct response to selection, enhancing the organisms fitness. “Evolution Canyon” (EC) in Israel mirrors a microcosmic evolutionary system across life and is ideal to study natural selection and local adaptation under sharply, microclimatically divergent environments. The south-facing, tropical, sunny and xeric “African” slope (AS) receives 200%–800% higher solar radiation than the north-facing, temperate, shady and mesic “European” slope (ES), 200 meters apart. Thus, solar ultraviolet radiation (UVR) is a major selection agent in EC influencing the organism-environment interaction. Melanin is a trait postulated to have evolved for UV-screening in microorganisms. Here we investigate the cause and effect relationship between differential UVR on the opposing slopes of EC and the conidial melanin concentration of the filamentous soil fungus Aspergillus niger. We test the working hypothesis that the AS strains exhibit higher melanin content than strains from the ES resulting in higher UV resistance. Methodology/Principal Findings We measured conidial melanin concentration of 80 strains from the EC using a spectrophotometer. The results indicated that mean conidial melanin concentration of AS strains were threefold higher than ES strains and the former resisted UVA irradiation better than the latter. Comparisons of melanin in the conidia of A. niger strains from sunny and shady microniches on the predominantly sunny AS and predominantly shady ES indicated that shady conditions on the AS have no influence on the selection on melanin; in contrast, the sunny strains from the ES displayed higher melanin concentrations. Conclusions/Significance We conclude that melanin in A. niger is an adaptive trait against UVR generated by natural selection.

Ecological stress and sex evolution in soil microfungi

The elucidation of the origin and maintenance of sex is a major unsolved problem in evolutionary biology. A number of hypotheses have been elaborated, but the scarcity of empirical data limits further progress. During recent years, the general inclination has changed towards pluralistic models of sex evolution, due partly to an increased diversity of studied organisms. Fungi are among the most promising organisms for testing sexual causation, as demonstrated in recent laboratory experiments. However, reconciling theory and evidence necessitates critical field observations. Here, we report new estimates of the distribution of morphologically sexual and asexual soil microfungi in nature, which indicate a remarkable trend towards increased sexuality with increasing climatic stress.

Soil micromycete diversity in the hypersaline Dead Sea coastal area, Israel

In the present study, a soil microfungal community was examined over a one-year period (1999–2000) at the western shore of the Dead Sea. A total of 78 species from 40 genera were isolated. The most prominent features of mycobiota of the territory studied were: (i) the prevailing number of melanin-containing micromycetes (46 species, 65.5 % of the total isolate number); (ii) a large share of teleomorphic Ascomyceta (26 species, 18.5 % of isolates); (iii) combination of true soil and plant surface inhabiting species; (iv) spatial and temporal variation of the mycobiota composition; (v) very low fungal density (nearly 500-fold lower than in the Judean Desert soil). These features are formed under the extremely stressful xeric and oligotrophic conditions in which the Dead Sea coastal micromycete community exists. Nine species (Alternaria alternata, A. raphani, Aspergillus niger, Aureobasidium pullulans, Chaetomium globosum, Ch. murorum, Cladosporium cladosporioides, Penicillium aurantiogriseum, and Stachybotrys chartarum) were considered a characteristic micromycete complex for the Dead Sea coastal habitat based on the spatial and temporal occurrence of these species. Many of the micromycetes isolated, including almost all the species listed above, are known to be distributed worldwide occurring in different soil types. This confirms the conclusion of many mycologists working in areas with saline and arid soils that there is no halo-and thermophilous mycobiota characteristic for those soils.

Differences in spontaneous mutation frequencies as a function of environmental stress in soil fungi at “Evolution Canyon,” Israel

When various wild strains of Penicillium lanosum and Aspergillus niger were placed in the same mild laboratory environment, their frequencies of new spontaneous mutations were clearly related to whether they had been isolated from a region of high or low microclimatic stress. In the mild environment, the total frequencies of conidial color and morphological mutations in P. lanosum, summed over all relevant loci, ranged from 0.29% to 2.4% for six strains from the north-facing, less stressful “European” slope (ES/NFS) of “Evolution Canyon” I, compared with 6.5–11.6% for five strains from the south-facing “African” slope (AS/SFS), which is a much more stressful environment, being harsher, drier, more fluctuating in temperature, and receiving up to eight times more UV radiation than the opposite slope. The corresponding figures for A. niger were 0.42–1.50% for three strains from the ES/NFS and 2.3–4.9% for six strains from the AS/SFS. The more mutagenic environment of the AS/SFS than of the ES/NFS means that, in Evolution Canyon, the mutation frequency differences between the very stressful environment and the less stressful environment are probably even larger than the 4- and 6-fold differences found here in a mild laboratory environment. The evidence from these two filamentous fungi, which have no sexual cycle, is that there are inherited differences in spontaneous mutation rates according to the levels of stress in the environment, and this feature may well be adaptive. Evolution Canyon I is at Nahal Oren, Mount Carmel, Israel.

Micromycetes from the Saline Arubotaim Cave: Mount Sedom, the Dead Sea Southwestern Shore, Israel

We examined the soil microfungal community of the saline Arubotaim Cave, Israel. A total of 68 species from 28 genera were isolated. The most prominent features of the cave mycobiota were: the prevailing number of melanin-containing micromycetes; the abundant presence of the Aspergillus species; a comparatively large share of sexual ascomycetes; and the spatial and temporal variation of the mycobiota composition. Nine species were considered as a characteristic micromycete core for the cave. Many of the micromycetes isolated are distributed worldwide. This confirms the conclusion of many mycologists working in areas with saline and arid soils that there is no specific halophilous mycobiota characteristic for these soils.

Review Paper: Daughters on request: about helpers and egg sexes in the Seychelles warbler

The Seychelles warbler (Acrocephalus sechellensis) was an endangered endemic of the Seychelles islands where, until 1988, the entire population of ca. 320 birds was restricted to the one island of Cousin Island (29 ha). Additional breeding populations were successfully established on the islands of Aride (68 ha, 1988) and Cousine (26 ha, 1990) and now with the existence of ca. 2000 warblers on three islands the conservation status of the warbler has improved from endangered to vulnerable. Emigration from the island is extremely rare, so birds that disappeared were known to have died. Almost every bird on Cousin Island has been individually colour ringed and monitored throughout all breeding attempts during a 17–year period (1985–2002; total ca. 2400 birds). These birds were also blood sampled for molecular parentage and sex analyses. Therefore the lifetime reproductive success of many birds is known. Although warblers can breed independently in their first year, some individuals remain in their natal territory as subordinates, and often help by providing nourishment to non–descendant offspring. The frequency of ‘helping’ is affected by habitat saturation and variation in territory quality (insect prey availability). The long–term benefits of helping are higher for daughters than for sons, and it is therefore no wonder that most helpers are daughters from previous broods. Furthermore, on low–quality territories breeding pairs raising sons gain higher fitness benefits than by raising daughters, and vice versa on high–quality territories. Female breeders adaptively modify the sex of their single–egg clutches according to territory quality: male eggs on low quality and female eggs on high quality. The Seychelles warbler is a beautiful example of behavioural and life–history adaptations to restricted circumstances.

Cultivable Microfungal Communities Inhabiting Biological Soil Crusts in the Tengger Desert, China

Biological soil crusts are essential components of arid ecosystems. We examined the variations in microfungal communities inhabiting different biological crust types in the vicinity of the Shapotou Research Station in the Tengger Desert, China. A total of 134 species from 66 genera were isolated using the soil dilution plate method. The mycobiota of the crusts from the Tengger Desert, similar to that of the Negev Desert in Israel, was dominated by melanin-containing species with large multicellular spores. Abundance of these xeric species increased spatially with increasing xeric conditions from moss-dominated to cyanobacterial crusts. Density of microfungal isolates displayed the opposite trend and was positively correlated with chlorophyll content, indicating the possible significant influence of organic matter content and wetness duration on fungal biomass. Within a chronosequence of the localities of different periods after sand stabilization with revegetation, little variations were revealed in species composition and isolate density of the crust microfungal communities, while a tendency towards a decrease in the community diversity level with the crust age was noted Microfungal communities from stabilized localities differed from those of the natural localities in abundance of the dominant and some frequent species, and in the fluctuations of diversity characteristics between the cyanobacterial and moss-dominated crusts. The variations in mycobiotic parameters in the soil crusts of the Tengger Desert were apparently associated with the topographically induced variations in abiotic conditions, while the differences in microfungal community of soil crusts between the Tengger and Negev deserts, such as the significantly higher abundance of thermotolerant species in the crusts of the Tengger Deserts, were caused by the principal differences in their precipitation regimes, associated with different rainy seasons, winter and summer in the Negev and Tengger deserts, respectively.

Fungal Community-Plant Litter Decomposition Relationships Along a Climate Gradient

Abstract The decomposition of plant litter is a major process of equivalent status to primary production in ecosystem functioning. The spatiotemporal changes in the composition and dynamics of litter fungal community along a climate gradient ranging from arid desert to humid-Mediterranean regions in Israel was examined using wheat straw litter bags placed at four selected sites along the climate gradient, arid, semi-arid, Mediterranean, and humid-Mediterranean sites. Litter samples were collected over a two-year decomposition period to evaluate litter weight loss, moisture, C:N ratio, fungal composition, and isolate density. The litter decomposition rate was found to be the highest during the first year of the study at the Mediterranean and arid sites. Although the Shannon-Wiener index values of the fungal communities in the litter samples were the highest at the humid-Mediterranean site, the number of fungal species was not significantly different between the four study sites. Different fungal groups were found to be related to different study sites: Basidiomycota, Mucoromycotina, and teleomorphic Ascomycota were associated with the humid-Mediterranean site, while Coelomycetes were mostly affected by the arid site. Our results indicate that climate factors play an important role in determining the structure of saprotrophic fungal communities in the decomposing litter and in mediating plant litter decomposition processes.

Vertical divergence of microfungal communities in soil profiles of “Evolution Canyon” I, Lower Nahal Oren, Mount Carmel, Israel

Abstract In the present study, species composition, the contribution of major groupings to community structure, and diversity level (species richness, heterogeneity, and evenness) were examined in their distribution in a soil depth of 0 – 43 cm in two opposite slopes at “Evolution Canyon” I, Nahal Oren, Mount Carmel, Israel. A total of 90 species from 35 genera belonging to Zygomycota (2 species), teleomorphic Ascomycota (12), and anamorphic Ascomycota (76) were isolated. In the soil profile of the xeric “African” south-facing slope (AS), melanin-containing fungi and teleomorphic species remarkably decreased their abundance with depth, while Penicillium spp. and Aspergillus spp. increased their contribution to the community structure. These variations were accompanied by a decrease in heterogeneity and evenness of the microfungal communities. In contrast, on the mesic “European” north-facing slope (ES), a sharp decrease in abundance of penicilli was observed with soil depth, followed by increasing diversity level of the communities. The variations in community structure through soil profiles were associated with variations in edaphic conditions (increasing soil moisture) together with escape from solar radiation on the AS and a decrease of organic matter content on the ES.