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Featured researches published by J. D. Allan.


Science | 2009

Evolution of Organic Aerosols in the Atmosphere

Jose L. Jimenez; Manjula R. Canagaratna; Neil M. Donahue; André S. H. Prévôt; Qi Zhang; Jesse H. Kroll; P. F. DeCarlo; J. D. Allan; Hugh Coe; Nga L. Ng; A. C. Aiken; Kenneth S. Docherty; Ingrid M. Ulbrich; Andrew P. Grieshop; Allen L. Robinson; Jonathan Duplissy; Jared D. Smith; Katherine Wilson; V. A. Lanz; C. Hueglin; Yele Sun; Jian Tian; Ari Laaksonen; T. Raatikainen; J. Rautiainen; Petri Vaattovaara; Mikael Ehn; Markku Kulmala; Jason M. Tomlinson; Don R. Collins

Framework for Change Organic aerosols make up 20 to 90% of the particulate mass of the troposphere and are important factors in both climate and human heath. However, their sources and removal pathways are very uncertain, and their atmospheric evolution is poorly characterized. Jimenez et al. (p. 1525; see the Perspective by Andreae) present an integrated framework of organic aerosol compositional evolution in the atmosphere, based on model results and field and laboratory data that simulate the dynamic aging behavior of organic aerosols. Particles become more oxidized, more hygroscopic, and less volatile with age, as they become oxygenated organic aerosols. These results should lead to better predictions of climate and air quality. Organic aerosols are not compositionally static, but they evolve dramatically within hours to days of their formation. Organic aerosol (OA) particles affect climate forcing and human health, but their sources and evolution remain poorly characterized. We present a unifying model framework describing the atmospheric evolution of OA that is constrained by high–time-resolution measurements of its composition, volatility, and oxidation state. OA and OA precursor gases evolve by becoming increasingly oxidized, less volatile, and more hygroscopic, leading to the formation of oxygenated organic aerosol (OOA), with concentrations comparable to those of sulfate aerosol throughout the Northern Hemisphere. Our model framework captures the dynamic aging behavior observed in both the atmosphere and laboratory: It can serve as a basis for improving parameterizations in regional and global models.


Geophysical Research Letters | 2007

Ubiquity and dominance of oxygenated species in organic aerosols in anthropogenically-influenced Northern Hemisphere midlatitudes

Qiu Zhang; Jose L. Jimenez; Manjula R. Canagaratna; J. D. Allan; Hugh Coe; Ingrid M. Ulbrich; M. R. Alfarra; Akinori Takami; Ann M. Middlebrook; Yele Sun; Katja Dzepina; E. J. Dunlea; Kenneth S. Docherty; P. F. DeCarlo; Dara Salcedo; Timothy B. Onasch; John T. Jayne; T. Miyoshi; Akio Shimono; Shiro Hatakeyama; N. Takegawa; Yutaka Kondo; Johannes Schneider; Frank Drewnick; S. Borrmann; Silke Weimer; Kenneth L. Demerjian; Paul Williams; Keith N. Bower; Roya Bahreini

[1] Organic aerosol (OA) data acquired by the Aerosol Mass Spectrometer (AMS) in 37 field campaigns were deconvolved into hydrocarbon-like OA (HOA) and several types of oxygenated OA (OOA) components. HOA has been linked to primary combustion emissions (mainly from fossil fuel) and other primary sources such as meat cooking. OOA is ubiquitous in various atmospheric environments, on average accounting for 64%, 83% and 95% of the total OA in urban, urban downwind, and rural/remote sites, respectively. A case study analysis of a rural site shows that the OOA concentration is much greater than the advected HOA, indicating that HOA oxidation is not an important source of OOA, and that OOA increases are mainly due to SOA. Most global models lack an explicit representation of SOA which may lead to significant biases in the magnitude, spatial and temporal distributions of OA, and in aerosol hygroscopic properties.


Journal of Geophysical Research | 2003

Quantitative sampling using an Aerodyne aerosol mass spectrometer 1. Techniques of data interpretation and error analysis

J. D. Allan; Jose L. Jimenez; P. I. Williams; M. Rami Alfarra; Keith N. Bower; John T. Jayne; Hugh Coe; Douglas R. Worsnop

Received 22 March 2002; revised 2 July 2002; accepted 5 August 2002; published 4 February 2003. [1] The aerosol mass spectrometer (AMS), manufactured by Aerodyne Research, Inc., has been shown to be capable of delivering quantitative information on the chemical composition and size of volatile and semivolatile fine airborne particulate matter with high time resolution. Analytical and software tools for interpreting the data from this instrument and generating meaningful, quantitative results have been developed and are presented here with a brief description of the instrument. These include the conversion of detected ion rates from the quadrupole mass spectrometer during the mass spectrum (MS) mode of operation to atmospheric mass concentrations of chemical species (in m gm � 3 ) by applying calibration data. It is also necessary to correct for variations in the electron multiplier performance, and a method involving the measurement of the instrument’s response to gas phase signals is also presented. The techniques for applying particle velocity calibration data and transforming signals from time of flight (TOF) mode to chemical mass distributions in terms of aerodynamic diameter (dM/dlog(Da) distributions) are also presented. It is also possible to quantify the uncertainties in both MS and TOF data by evaluating the ion counting statistics and variability of the background signal, respectively. This paper is accompanied by part 2 of this series, in which these methods are used to process and analyze AMS results on ambient aerosol from two U.K. cities at different times of the year. INDEX TERMS: 0305 Atmospheric Composition and Structure: Aerosols and particles (0345, 4801); 0394 Atmospheric Composition and Structure: Instruments and techniques; 0399 Atmospheric Composition and Structure: General or miscellaneous; KEYWORDS: aerosols, chemical composition, mass spectrometry, analysis techniques


Aerosol Science and Technology | 2005

Characterization of an Aerodyne Aerosol Mass Spectrometer (AMS): Intercomparison with other aerosol instruments

N. Takegawa; Yuzo Miyazaki; Yutaka Kondo; Yuichi Komazaki; Takuma Miyakawa; Jose L. Jimenez; John T. Jayne; D. R. Worsnop; J. D. Allan; Rodney J. Weber

The Aerodyne Aerosol Mass Spectrometer (AMS) provides size-resolved chemical composition of non-refractory (vaporized at 600°C under vacuum) submicron aerosols with a time resolution of the order of minutes. Ambient measurements were performed in Tokyo between February 2003 and February 2004. We present intercomparisons of the AMS with a Particle-Into-Liquid Sampler combined with an Ion Chromatography analyzer (PILS-IC) and a Sunset Laboratory semi-continuous thermal-optical carbon analyzer. The temperature of the AMS inlet manifold was maintained at > 10 ˆ C above the ambient dew point to dry particles in the sample air (relative humidity (RH) in the inlet < 53%). Assuming a particle collection efficiency of 0.5 for the AMS, the mass concentrations of inorganic species (nitrate, sulfate, chloride, and ammonium) measured by the AMS agree with those measured by the PILS-IC to within 26%. The mass concentrations of organic compounds measured by the AMS correlate well with organic carbon (OC) mass measured by the Sunset Laboratory carbon analyzer (r 2 = 0.67–0.83). Assuming the same collection efficiency of 0.5 for the AMS organics, the linear regression slope is found to be 1.8 in summer and 1.6 in fall. These values are consistent with expected ratios of organic matter (OM) to OC in urban air.


Journal of Geophysical Research | 2004

Submicron aerosol composition at Trinidad Head, California, during ITCT 2K2: Its relationship with gas phase volatile organic carbon and assessment of instrument performance

J. D. Allan; Keith N. Bower; Hugh Coe; Hacene Boudries; John T. Jayne; Manjula R. Canagaratna; Dylan B. Millet; Allen H. Goldstein; Patricia K. Quinn; Rodney J. Weber; Douglas R. Worsnop

[1] Two Aerodyne aerosol mass spectrometers (AMSs) were deployed at Trinidad Head on the north Californian coast during the National Oceanographic and Atmospheric Administration Intercontinental Transport and Chemical Transformation 2002 (ITCT 2K2) experiment, to study the physiochemical properties of submicron aerosol particles within the Pacific marine boundary layer. One AMS was modified to allow the study of sea salt-based particles, while the other used a temperature cycling system on its inlet. The reported loadings increased by a factor of 2 when the temperature approached the dew point, which is due to the inlet performance and has implications for other AMS experiments and applications. The processed data were compared with those of a particle into liquid sampler-ion chromatograph and showed that the ammonium, sulfate and organic fractions of the particles were consistently found within a single, normally acidic, accumulation mode at around 300 - 400 nm. However, when influenced by land-based sources, vehicle emissions and increased ammonium loadings were seen. The concentrations of nitrate in the accumulation mode were low, but it was also found within sea salt particles in the coarse mode and can be linked to the displacement of chloride. The organic fraction showed a high degree of chemical ageing and evidence of nitrogen-bearing organics was also observed. The particulate organic data were compared to the volatile organic carbon data derived from an in-situ gas chromatograph-mass spectrometer-flame ionization detector and relationships were found between the gas and particle phase chemicals in both the overall concentrations and the levels of oxidation.


Geophysical Research Letters | 2009

Mass spectral characterization of submicron biogenic organic particles in the Amazon Basin

Qi Chen; Delphine K. Farmer; Johannes Schneider; S. R. Zorn; Colette L. Heald; Thomas Karl; Alex Guenther; J. D. Allan; N. H. Robinson; Hugh Coe; Joel R. Kimmel; Theotonio Pauliquevis; S. Borrmann; Ulrich Pöschl; Meinrat O. Andreae; Paulo Artaxo; Jose L. Jimenez; Scot T. Martin

Submicron atmospheric particles in the Amazon Basin were characterized by a high-resolution aerosol mass spectrometer during the wet season of 2008. Patterns in the mass spectra closely resembled those of secondary-organic-aerosol (SOA) particles formed in environmental chambers from biogenic precursor gases. In contrast, mass spectral indicators of primary biological aerosol particles (PBAPs) were insignificant, suggesting that PBAPs contributed negligibly to the submicron fraction of particles during the period of study. For 40% of the measurement periods, the mass spectra indicate that in-Basin biogenic SOA production was the dominant source of the submicron mass fraction, contrasted to other periods (30%) during which out-of-Basin organic-carbon sources were significant on top of the baseline in-Basin processes. The in-Basin periods had an average organic-particle loading of 0.6 mu g m(-3) and an average elemental oxygen-to-carbon (O:C) ratio of 0.42, compared to 0.9 mu g m(-3) and 0.49, respectively, during periods of out-of-Basin influence. On the basis of the data, we conclude that most of the organic material composing submicron particles over the Basin derived from biogenic SOA production, a finding that is consistent with microscopy observations made in a concurrent study. This source was augmented during some periods by aged organic material delivered by long-range transport. Citation: Chen, Q., et al. (2009), Mass spectral characterization of submicron biogenic organic particles in the Amazon Basin, Geophys. Res. Lett., 36, L20806, doi: 10.1029/2009GL039880.


Aerosol Science and Technology | 2007

Laboratory and Ambient Particle Density Determinations using Light Scattering in Conjunction with Aerosol Mass Spectrometry

Eben S. Cross; Jay G. Slowik; P. Davidovits; J. D. Allan; Douglas R. Worsnop; John T. Jayne; David K. Lewis; Manjula R. Canagaratna; Timothy B. Onasch

A light scattering module has been integrated into the current AMS instrument. This module provides the simultaneous measurement of vacuum aerodynamic diameter (d va) and scattered light intensity (RLS) for all particles sampled by the AMS above ∼180 nm geometric diameter. Particle counting statistics and correlated chemical ion signal intensities are obtained for every particle that scatters light. A single calibration curve converts RLS to an optical diameter (d o). Using the relationship between d va and d o the LS-AMS provides a real-time, per particle measurement of the density of the sampled aerosol particles. The current article is focused on LS-AMS measurements of spherical, non-absorbing aerosol particles. The laboratory characterization of LS-AMS shows that a single calibration curve yields the material density of spherical particles with real refractive indices (n) over a range from 1.41 < n < 1.60 with an accuracy of about ±10%. The density resolution of the current LS-AMS system is also shown to be 10% indicating that externally mixed inorganic/organic aerosol distributions can be resolved. In addition to the single particle measurements of d va and RLS, correlated chemical ion signal intensities are obtained with the quadrupole mass spectrometer. A comparison of the particle mass derived from the physical (RLS and d va) and chemical measurements provides a consistency check on the performance of the LS-AMS. The ability of the LS-AMS instrument to measure the density of ambient aerosol particles is demonstrated with sample results obtained during the Northeast Air Quality Study (NEAQS) in the summer of 2004. †Also Margaret W. Kelly, Professor of Chemistry at Connecticut College, New London, Connecticut, USA.


Journal of Geophysical Research | 2009

Particulate emissions from commercial shipping: Chemical, physical, and optical properties

D. A. Lack; James J. Corbett; Timothy B. Onasch; Paola Massoli; Patricia K. Quinn; T. S. Bates; David S. Covert; D. J. Coffman; Berko Sierau; Scott C. Herndon; J. D. Allan; Tahllee Baynard; Edward R. Lovejoy; A. R. Ravishankara; Eric J. Williams

provide chemical and physical characteristics including sulfate (SO4� ) mass, organic matter (OM) mass, black carbon (BC) mass, particulate matter (PM) mass, number concentrations (condensation nuclei (CN) > 5 nm), and cloud condensation nuclei (CCN). Optical characterization included multiple wavelength visible light absorption and extinction, extinction relative humidity dependence, and single scatter albedo (SSA). The global contribution of shipping PM was calculated to be 0.90 Tg a � 1 , in good agreement with previous inventories (0.91 and 1.13 Tg a � 1 from Eyring et al. (2005a) and Wang et al. [2008]). Observed PM composition was 46% SO4� , 39% OM, and 15% BC and differs from inventories that used 81%, 14%, and 5% and 31%, 63%, and 6% SO4� , OM, and BC, respectively. SO4� and OM mass were found to be dependent on fuel sulfur content as were SSA, hygroscopicity, and CCN concentrations. BC mass was dependent on engine type and combustion efficiency. A plume evolution study conducted on one vessel showed conservation of particle light absorption, decrease in CN > 5 nm, increase in particle hygroscopicity, and an increase in average particle size with distance from emission. These results suggest emission of small nucleation mode particles that subsequently coagulate/condense onto larger BC and OM. This work contributes to an improved understanding of the impacts of ship emissions on climate and air quality and will also assist in determining potential effects of altering fuel standards.


Chemical Reviews | 2015

The Molecular Identification of Organic Compounds in the Atmosphere: State of the Art and Challenges

Barbara Nozière; Markus Kaberer; M. Claeys; J. D. Allan; Barbara D'Anna; Stefano Decesari; E. Finessi; Marianne Glasius; Irena Grgić; Jacqueline F. Hamilton; Thorsten Hoffmann; Yoshiteru Iinuma; Mohammed Jaoui; Ariane Kahno; Christopher J. Kampf; Ivan Kourtchev; Willy Maenhaut; Nicholas Marsden; Sanna Saarikoski; Jürgen Schnelle-Kreis; Jason D. Surratt; Sönke Szidat; Rafal Szmigielski; Armin Wisthaler

Atmosphere: State of the Art and Challenges Barbara Nozier̀e,*,† Markus Kalberer,*,‡ Magda Claeys,* James Allan, Barbara D’Anna,† Stefano Decesari, Emanuela Finessi, Marianne Glasius, Irena Grgic,́ Jacqueline F. Hamilton, Thorsten Hoffmann, Yoshiteru Iinuma, Mohammed Jaoui, Ariane Kahnt, Christopher J. Kampf, Ivan Kourtchev,‡ Willy Maenhaut, Nicholas Marsden, Sanna Saarikoski, Jürgen Schnelle-Kreis, Jason D. Surratt, Sönke Szidat, Rafal Szmigielski, and Armin Wisthaler †Ircelyon/CNRS and Universite ́ Lyon 1, 69626 Villeurbanne Cedex, France ‡University of Cambridge, Cambridge CB2 1EW, United Kingdom University of Antwerp, 2000 Antwerp, Belgium The University of Manchester & National Centre for Atmospheric Science, Manchester M13 9PL, United Kingdom Istituto ISAC C.N.R., I-40129 Bologna, Italy University of York, York YO10 5DD, United Kingdom University of Aarhus, 8000 Aarhus C, Denmark National Institute of Chemistry, 1000 Ljubljana, Slovenia Johannes Gutenberg-Universitaẗ, 55122 Mainz, Germany Leibniz-Institut für Troposphar̈enforschung, 04318 Leipzig, Germany Alion Science & Technology, McLean, Virginia 22102, United States Max Planck Institute for Chemistry, 55128 Mainz, Germany Ghent University, 9000 Gent, Belgium Finnish Meteorological Institute, FI-00101 Helsinki, Finland Helmholtz Zentrum München, D-85764 Neuherberg, Germany University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, United States University of Bern, 3012 Bern, Switzerland Institute of Physical Chemistry PAS, Warsaw 01-224, Poland University of Oslo, 0316 Oslo, Norway


Geophysical Research Letters | 2005

Impact of particulate organic matter on the relative humidity dependence of light scattering: A simplified parameterization

Patricia K. Quinn; T. S. Bates; Tahllee Baynard; Antony D. Clarke; Timothy B. Onasch; Wei Wang; Mark J. Rood; E. Andrews; J. D. Allan; Christian M. Carrico; D. J. Coffman; D. R. Worsnop

[1] Measurementsduringrecentfieldcampaignsdownwind of the Indian subcontinent, Asia, and the northeastern United States reveal a substantial decrease in the relative humidity dependence of light scattering, fssp(RH), with increasing mass fraction of particulate organic matter (POM) for submicrometer aerosol. Using data from INDOEX (INDian Ocean EXperiment), ACE Asia (Aerosol Characterization Experiment – Asia), and ICARTT (International Consortium for Atmospheric Research on Transport and Transformation), we have identified, within measurement limitations, the impact of POM on the fssp(RH) of accumulation mode sulfate-POM mixtures. The result is a parameterization that quantifies the POM mass fraction - fssp(RH) relationship for use in radiative transfer and air quality models either as input or as validation. The parameterization is valid where the aerosol consists of an internally mixed sulfatecarbonaceous accumulation mode and other externally mixed components (e.g. sea salt, dust) and is applicable on both global and regional scales. Citation: Quinn, P. K., et al. (2005), Impact of particulate organic matter on the relative humidity dependence of light scattering: A simplified parameterization, Geophys. Res. Lett., 32, L22809, doi:10.1029/ 2005GL024322.

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Hugh Coe

University of Manchester

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P. I. Williams

University of Manchester

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Keith N. Bower

University of Manchester

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Jose L. Jimenez

University of Colorado Boulder

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M. Flynn

University of Manchester

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John T. Jayne

Massachusetts Institute of Technology

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Dantong Liu

University of Manchester

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