J. J. Nunez

Factors affecting the development of cavity spot of carrot

Pythium violae and P. ultimum, isolated from cavity spot lesions on carrots produced in California, caused typical cavity spots on carrots grown in artificially infested soil in the greenhouse. In a 2-yr survey of 54 fields in the San Joaquin Valley of California, cavity spot incidence was not correlated with soil pH, electrical conductivity, moisture-holding capacity, organic matter, total and exchangeable calcium, particle size distribution, or planting densities (57, 115, or 230 carrots per meter of row). In a growth chamber maintained at 20 C, six commonly grown carrot cultivars were susceptible to both Pythium spp (.)

Environmental Factors Affecting Rose Downy Mildew and Development of a Forecasting Model for a Nursery Production System

The effect of various environmental parameters on rose downy mildew caused by Peronospora sparsa was determined under controlled conditions and in the field. In growth chambers, optimal temperatures for infection and colonization of rose leaves were 15 to 20°C and 20 to 25°C, respectively. At optimal temperatures, infection required only 2 h of leaf wetness, although disease severity increased significantly with an increasing duration of leaf wetness up to 10 h. Infection of leaves occurred at temperatures as low as 5°C with 8 h of leaf wetness. The latent period of infection varied from 4 to 7 days. Weather and disease incidence data collected from natural field epidemics were used in the development of a predictive model of rose downy mildew. Logistic regression was used to identify those weather variables that explained the largest portion of the variation in disease incidence. The optimum regression model incorporated three weather variables calculated as cumulative totals over the previous 10 days: (i) hours of leaf wetness when temperatures were less than 20°C (positive correlation); (ii) hours between 15 and 20°C (negative correlation); and (iii) hours when temperatures exceeded 30°C (negative correlation). The simplest model, which was also a good fit, included only the 10-day cumulative number of hours of leaf wetness. The critical number of hours of leaf wetness for disease development was an average of 8.4 h per day over 10 days.

Survival and Persistence of Alternaria dauci in Carrot Cropping Systems

Alternaria dauci was recovered in California from carrot crop residue and from volunteer carrot plants in fallow carrot fields. The fungus was not recovered from common weeds surrounding fallow fields. To evaluate further the survival of A. dauci on carrot crop residue, infected carrot leaf tissue was placed in fields or in soil in greenhouse pots, and recovered over time. In California, A. dauci was recovered from infected leaf tissue in both fallow and irrigated fields for as long as 1 year. In Florida, A. dauci was recovered from infected leaf tissue in fallow fields for up to 30 weeks. In greenhouse experiments, A. dauci was recovered from infected leaf tissue for as long as 1 year in dry soil, but only up to 30 weeks in soil that was watered weekly. To determine the infectivity of A. dauci borne on carrot crop residue, infected carrot crops were incorporated into organic and mineral field soils, and soil samples were collected over time. Carrot seed were planted in collected soil, and seedling infection by A. dauci was recorded. Seedling infection was detected up to 13 and 14 weeks after crop incorporation in organic and mineral soil, respectively. Seedling infection was detected for up to 5 weeks in soil that remained dry compared with 3 weeks in flooded soil.

Detection and Management of Downy Mildew in Rose Rootstock

A technique utilizing the polymerase chain reaction (PCR) was developed to investigate the occurrence and location of Peronospora sparsain dormant, woody rose tissues. PCR primers were designed to amplify the internal transcribed spacer region of the ribosomal DNA of the pathogen. Inhibition of the reaction by plant compounds was minimized by optimizing the reagents used in the extraction of DNA from roses and in the amplification reaction. The PCR assay was capable of detecting as little as 2 pg of DNA from P. sparsa against a background of 4 ng of DNA from rose cane cortex. With this method, DNA of P. sparsa was detected in the cortex of stem and root tissues of symptomatic plants. Pathogen DNA also was detected in the cortex of crown tissues of asymptomatic mother plants used as a source of propagation materials. Epifluorescent and differential interference contrast microscopy were used to confirm the presence of abundant hyphae and oospores within the stem cortex of infected canes. Preplant treatments of dormant rootstock cuttings in fungicides or hot water were evaluated during natural outbreaks of the disease in commercial rose nurseries. In three trials conducted over 2 years, a 10-min preplant dip in the systemic fungicides metalaxyl or mefenoxam at rates of 100 to 10,000 mg a.i./liter reduced the area under the disease progress curve by 63 to 76% relative to nontreated plots. The evidence from PCR assays, microscopy, and fungicide trials all support the occurrence of perennating infections of P. sparsa within rose. A technique utilizing the polymerase chain reaction (PCR) was developed to investigate the occurrence and location of Peronospora sparsain dormant, woody rose tissues. PCR primers were designed to amplify the internal transcribed spacer region of the ribosomal DNA of the pathogen. Inhibition of the reaction by plant compounds was minimized by optimizing the reagents used in the extraction of DNA from roses and in the amplification reaction. The PCR assay was capable of detecting as little as 2 pg of DNA from P. sparsa against a background of 4 ng of DNA from rose cane cortex. With this method, DNA of P. sparsa was detected in the cortex of stem and root tissues of symptomatic plants. Pathogen DNA also was detected in the cortex of crown tissues of asymptomatic mother plants used as a source of propagation materials. Epifluorescent and differential interference contrast microscopy were used to confirm the presence of abundant hyphae and oospores within the stem cortex of infected canes. Preplant treatments of dormant rootstock cuttings in fungicides or hot water were evaluated during natural outbreaks of the disease in commercial rose nurseries. In three trials conducted over 2 years, a 10-min preplant dip in the systemic fungicides metalaxyl or mefenoxam at rates of 100 to 10,000 mg a.i./liter reduced the area under the disease progress curve by 63 to 76% relative to nontreated plots. The evidence from PCR assays, microscopy, and fungicide trials all support the occurrence of perennating infections of P. sparsa within rose.

Efficacy of Germination Stimulants of Sclerotia of Sclerotium cepivorum for Management of White Rot of Garlic

The ability of soil-applied garlic powder and diallyl disulfide to stimulate germination of sclerotia of Sclerotium cepivorum, the cause of white rot of onion and garlic, was evaluated in four field trials. Because sclerotia germinate in response to exudation of specific volatile sulfides and thiols from allium roots, sulfides applied to the ground in the absence of an allium crop cause death of the sclerotia after they germinate and exhaust nutrient reserves. In this study, garlic powder and a synthetic garlic oil, diallyl disulfide, were incorporated into the soil in commercial fields naturally infested with S. cepivorum. Methyl bromide was included as a chemical control. Within 3 months after treatment, over 90% of the sclerotia died in the plots treated with the germinationstimulants, which was similar to the reduction of viable sclerotia achieved with an application of methyl bromide. The degree of sclerotial mortality in plots treated with garlic powder at 112 kg/ha or more was almost equal to that achieved by diallyl disulfide at 0.5 ml/m2 or methyl bromide at 448 kg/ha. Despite the efficacy of the stimulants and methyl bromide to reduce populations of sclerotia, the pathogen caused substantial root rot and yield losses in subsequent garlic crops planted about a year after soil treatment. However, germination stimulants have utility because the reduction of the vast majority of sclerotia in a field reduces the risk of spread of the pathogen to neighboring fields.

Characterization and Control of Garlic Rust in California

In 1998, a devastating outbreak of rust disease severely damaged the garlic crop in California, resulting in yield losses of 51% and an economic loss of 27% to the industry. The disease also occurred in 1999 and 2000, indicating that rust may have become an annual problem in some parts of the state. The presence of urediniospores, two-celled teliospores, and telial paraphyses indicated that the pathogen was Puccinia allii. Isolates from garlic infected onion and chives, but not leek, elephant garlic, or shallot in inoculation experiments. Garlic cloves obtained from diseased plants were planted under controlled conditions, but the resulting plants did not develop rust. Fungicide trials were conducted for 3 years and showed that none of the currently registered materials gave satisfactory control. However, tebuconazole and azoxystrobin provided good protection against rust if sprayed at 10-day intervals. A variety trial of 34 garlic cultivars and selections was planted, inoculated, and evaluated for resistance to rust. Although there was variability in rust severity among the selections, acceptable levels of resistance were not observed in any cultivar.

Benefits of Cotton Seed Treatments for the Control of Seedling Diseases in Relation to Inoculum Densities of Pythium Species and Rhizoctonia solani

Twenty-five field trials conducted over a 3-year period in five San Joaquin Valley counties included the following treatments: nontreated cotton seed; seed treated with myclobutanil for the control of Rhizoctonia solani-induced damping-off; seed treated with metalaxyl for the control of Pythium-induced damping-off; and seed treated with a combination of the two fungicides. The following parameters were measured: soil populations of Pythium spp. and R. solani at planting, soil temperature at planting, air temperatures for 5 days after planting, soil particle analysis, EC, calcium, pH, organic matter, and plant stands from each treatment. In 1993 and 1994, myclobutanil and the combination of the two fungicides resulted in improved stands in 15 of 18 fields. Metalaxyl did not increase stands in any field in 1993 to 1994. In 1995, the combination of fungicides increased stands relative to the nontreated seeds and was more effective in increasing stands than myclobutanil or metalaxyl alone. Pythium populations were much greater in 1995 than in 1993 to 1994 and may explain the increase in plant stands with the combination of fungicides and metalaxyl alone. Covariate analysis of the data indicated no relationship between stand increases from fungicide seed treatment and any of the soil parameters measured. Heat units following planting were not limiting and had no effect on stands. Populations of pathogens were not related to benefits of fungicides, with the exception of a negative correlation between stand increases from seed treatment with myclobutanil and Pythium populations. Apparently, seed protected with a fungicide active against R. solani were more susceptible to infection by Pythium spp. In general, the fungicide seed treatment active against R. solani increased stands of the cultivar Maxxa regardless of soil type and pathogen populations. Increased stands from the metalaxyl treatment occurred in 1 of the 3 years of the study.

Host range and influence of nutrition, temperature, and pH on growth of Pythium violae from carrot

The host range of Pythium violae, the cause of cavity spot of carrots, was determined in artificially infested potting mix in the greenhouse and in naturally infested field soil. Six new symptomless hosts were identified in greenhouse pathogenicity tests: cowpea, broccoli, celery, cucumber, sugar beet, and watermelon. Cowpea and cauliflower were also infected in natural field soil. The susceptibility of three previously reported hosts of P. violae, carrot, alfalfa, and wheat, was confirmed. The utilization of 10 carbon sources, 13 nitrogen sources, and three vitamins by P. violae was examined in liquid culture under controlled conditions

First report of Xanthomonas leaf blight of onion in California.

In 2000 and 2001, severe leaf blight of fresh market onions occurred in several fields in the Antelope Valley of California, a high desert area located in northern Los Angeles County. In at least two fields, 70% of the canopy was affected, which resulted in an estimated yield reduction of over 50%. Both organically and conventionally grown onions were affected. Symptoms included numerous small chlorotic lesions that appeared first on older leaves. Lesions were often surrounded by water-soaked margins. As the season progressed, the lesions became elongated and necrotic. Entire leaf blades were often killed. The disease never progressed into the bulbs, but bulbs of infected plants never grew to full size. Yellow mucoid bacterial colonies were recovered on yeast extractdextrose-CaCO3 agar from symptomatic tissue. All isolates were gram-negative rods with single polar flagella. Two representative isolates were identified as Xanthomonas campestris based on their carbon utilization profile (similarity index of 0.784 and 0.850; Biolog, Hayward, CA), fatty acid profile (similarity index of 0.588; MIS-TSBA, version 4.10, MIDI Inc., Newark, DE), and 16S-23S intergenic spacer DNA sequences (98% sequence identify with strains of X. campestris). In greenhouse pathogenicity tests, eight white globe onion plants were inoculated with a bacterial suspension (106 CFU/ml) of each of the two isolates. Plants were inoculated by spraying the suspension on leaves lightly injured by rubbing with Carborundum or puncturing with needles dipped in the suspension. Controls were inoculated with water. All plants inoculated with the bacteria developed symptoms in 6 days. The bacterium was reisolated from all inoculated plants and confirmed as Xanthomonas. The trial was conducted twice. To our knowledge, this is the first report of Xanthomonas leaf blight of onion in California. In the United States, the disease has been reported in Texas and Colorado (1,2). References: 1. T. Isakeit et al. Plant Dis. 84:201, 2000. 2. H. F. Schwartz and K. Otto. Plant Dis. 84:922, 2000.

Influence of Soil Saturation and Temperature on Erwinia chrysanthemi Soft Rot of Carrot

In 1998, soft rot caused by Erwinia chrysanthemi resulted in an estimated loss of 1,800 tons of carrots in California. The disease appeared to be related to unusually high temperatures and excessive irrigation. To determine the optimum conditions for development of soft rot under controlled conditions, pots of carrots inoculated with E. chrysanthemi were saturated with water and incubated at 20, 25, 30, or 35°C. Plants were harvested and examined for disease 12, 24, 36, 48, 72, and 96 h after inoculation. Negligible disease occurred after 12 h. Disease severity and incidence increased with increasing temperature and duration of saturation from 24 to 96 h. In a second experiment, carrot disks were inoculated with three isolates each of E. chrysanthemi and E. carotovora subsp. carotovora and incubated at 15, 20, 25, 30, and 35°C. After 48 h, the disks were washed to remove rotted tissue and reweighed. Neither bacterium reduced carrot disk weight at 15°C. In general, moderate weight reduction occurred at 20 and 25°C. The greatest degree of soft rot was caused by E. chrysanthemi at 30 and 35°C. E. carotovora subsp. carotovora isolates were relatively less virulent than E. chrysanthemi at 30°C and none of the E. carotovora subsp. carotovora isolates reduced carrot disk weight at 35°C. This is the first report of E. chrysanthemi causing soft rot of carrot in California. Based on these results, growers should limit the length of time carrot roots are exposed to saturated soil, especially at high soil temperatures.