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Featured researches published by J. R. Hopkins.


Nature | 2008

Extensive halogen-mediated ozone destruction over the tropical Atlantic Ocean

K. A. Read; Anoop S. Mahajan; Lucy J. Carpenter; M. J. Evans; Bruno V. E. Faria; Dwayne E. Heard; J. R. Hopkins; James Lee; Sarah Moller; Alastair C. Lewis; Luis Mendes; J. B. McQuaid; H. Oetjen; Alfonso Saiz-Lopez; Michael J. Pilling; John M. C. Plane

Increasing tropospheric ozone levels over the past 150 years have led to a significant climate perturbation; the prediction of future trends in tropospheric ozone will require a full understanding of both its precursor emissions and its destruction processes. A large proportion of tropospheric ozone loss occurs in the tropical marine boundary layer and is thought to be driven primarily by high ozone photolysis rates in the presence of high concentrations of water vapour. A further reduction in the tropospheric ozone burden through bromine and iodine emitted from open-ocean marine sources has been postulated by numerical models, but thus far has not been verified by observations. Here we report eight months of spectroscopic measurements at the Cape Verde Observatory indicative of the ubiquitous daytime presence of bromine monoxide and iodine monoxide in the tropical marine boundary layer. A year-round data set of co-located in situ surface trace gas measurements made in conjunction with low-level aircraft observations shows that the mean daily observed ozone loss is ∼50 per cent greater than that simulated by a global chemistry model using a classical photochemistry scheme that excludes halogen chemistry. We perform box model calculations that indicate that the observed halogen concentrations induce the extra ozone loss required for the models to match observations. Our results show that halogen chemistry has a significant and extensive influence on photochemical ozone loss in the tropical Atlantic Ocean boundary layer. The omission of halogen sources and their chemistry in atmospheric models may lead to significant errors in calculations of global ozone budgets, tropospheric oxidizing capacity and methane oxidation rates, both historically and in the future.


Proceedings of the National Academy of Sciences of the United States of America | 2009

Nitrogen management is essential to prevent tropical oil palm plantations from causing ground-level ozone pollution

C. N. Hewitt; A. R. MacKenzie; P. Di Carlo; C. Di Marco; J. R. Dorsey; M. J. Evans; D. Fowler; Martin Gallagher; J. R. Hopkins; C. E. Jones; Ben Langford; James Lee; Alastair C. Lewis; S. F. Lim; J. B. McQuaid; Pawel K. Misztal; Sarah Moller; Paul S. Monks; E. Nemitz; D. E. Oram; Susan M. Owen; Gavin Phillips; Thomas A. M. Pugh; J. A. Pyle; C. E. Reeves; James Ryder; Jambery Siong; U. Skiba; D. Stewart

More than half the worlds rainforest has been lost to agriculture since the Industrial Revolution. Among the most widespread tropical crops is oil palm (Elaeis guineensis): global production now exceeds 35 million tonnes per year. In Malaysia, for example, 13% of land area is now oil palm plantation, compared with 1% in 1974. There are enormous pressures to increase palm oil production for food, domestic products, and, especially, biofuels. Greater use of palm oil for biofuel production is predicated on the assumption that palm oil is an “environmentally friendly” fuel feedstock. Here we show, using measurements and models, that oil palm plantations in Malaysia directly emit more oxides of nitrogen and volatile organic compounds than rainforest. These compounds lead to the production of ground-level ozone (O3), an air pollutant that damages human health, plants, and materials, reduces crop productivity, and has effects on the Earths climate. Our measurements show that, at present, O3 concentrations do not differ significantly over rainforest and adjacent oil palm plantation landscapes. However, our model calculations predict that if concentrations of oxides of nitrogen in Borneo are allowed to reach those currently seen over rural North America and Europe, ground-level O3 concentrations will reach 100 parts per billion (109) volume (ppbv) and exceed levels known to be harmful to human health. Our study provides an early warning of the urgent need to develop policies that manage nitrogen emissions if the detrimental effects of palm oil production on air quality and climate are to be avoided.


Journal of Environmental Monitoring | 2003

A two-column method for long-term monitoring of non-methane hydrocarbons (NMHCs) and oxygenated volatile organic compounds (o-VOCs)

J. R. Hopkins; Alastair C. Lewis; K. A. Read

A method has been developed for concurrent analysis of C2-C7 hydrocarbons and C2-C5 oxygenated volatile organic compounds (o-VOCs) including alcohols, aldehydes, ketones and ethers. A multi-bed, Peltier-cooled adsorbent trap, consisting of Carboxen 1000 and Carbopack B, was used to acquire one sample per hour. Upon injection the sample was split in an approximately 50:50 ratio between a 50 m aluminium oxide (Al2O3) porous layer open tubular (PLOT) column and a 10 m LOWOX column. Eluents from each column were then analysed using flame ionisation detection (FID). Regular calibration of the system was performed using a standard cylinder mixture at the parts per billion by volume (ppbV) level for non-methane hydrocarbons (NMHCs) and a permeation tube method for the oxygenated species. The system is fully automated with NMHC detection limits between 1 and 10 parts per trillion by volume (pptV) and o-VOC detection limits between 10 and 40 pptV.


Bulletin of the American Meteorological Society | 2015

Meteorology, air quality, and health in London: The ClearfLo project

Sylvia I. Bohnenstengel; Stephen E. Belcher; A. C. Aiken; J. D. Allan; G. Allen; Asan Bacak; Thomas J. Bannan; Janet F. Barlow; David C. S. Beddows; William J. Bloss; Am Booth; Charles Chemel; Omduth Coceal; C. Di Marco; Manvendra K. Dubey; K.H. Faloon; Zoe L. Fleming; Markus Furger; Johanna K. Gietl; R. Graves; David Green; C. S. B. Grimmond; Christos Halios; Jacqueline F. Hamilton; Roy M. Harrison; Mathew R. Heal; Dwayne E. Heard; Carole Helfter; Scott C. Herndon; R.E. Holmes

AbstractAir quality and heat are strong health drivers, and their accurate assessment and forecast are important in densely populated urban areas. However, the sources and processes leading to high concentrations of main pollutants, such as ozone, nitrogen dioxide, and fine and coarse particulate matter, in complex urban areas are not fully understood, limiting our ability to forecast air quality accurately. This paper introduces the Clean Air for London (ClearfLo; www.clearflo.ac.uk) project’s interdisciplinary approach to investigate the processes leading to poor air quality and elevated temperatures.Within ClearfLo, a large multi-institutional project funded by the U.K. Natural Environment Research Council (NERC), integrated measurements of meteorology and gaseous, and particulate composition/loading within the atmosphere of London, United Kingdom, were undertaken to understand the processes underlying poor air quality. Long-term measurement infrastructure installed at multiple levels (street and eleva...


Journal of Geophysical Research | 2007

Chemical composition observed over the mid-atlantic and the detection of pollution signatures far from source regions

Alastair C. Lewis; M. J. Evans; John Methven; N. Watson; James Lee; J. R. Hopkins; R. M. Purvis; S. R. Arnold; J. B. McQuaid; L. K. Whalley; Michael J. Pilling; Dwayne E. Heard; Paul S. Monks; A. E. Parker; C. E. Reeves; D. E. Oram; G. P. Mills; Brian J. Bandy; D. Stewart; Hugh Coe; Paul Williams; J. Crosier

The atmospheric composition of the central North Atlantic region has been sampled using the FAAM BAe146 instrumented aircraft during the Intercontinental Transport of Ozone and Precursors (ITOP) campaign, part of the wider International Consortium for Atmospheric Research on Transport and Transformation (ICARTT). This paper presents an overview of the ITOP campaign. Between late July and early August 2004, twelve flights comprising 72 hours of measurement were made in a region from approximately 20 to 40°W and 33 to 47°N centered on Faial Island, Azores, ranging in altitude from 50 to 9000 m. The vertical profiles of O3 and CO are consistent with previous observations made in this region during 1997 and our knowledge of the seasonal cycles within the region. A cluster analysis technique is used to partition the data set into air mass types with distinct chemical signatures. Six clusters provide a suitable balance between cluster generality and specificity. The clusters are labeled as biomass burning, low level outflow, upper level outflow, moist lower troposphere, marine and upper troposphere. During this summer, boreal forest fire emissions from Alaska and northern Canada were found to provide a major perturbation of tropospheric composition in CO, PAN, organic compounds and aerosol. Anthropogenic influenced air from the continental boundary layer of the USA was clearly observed running above the marine boundary layer right across the mid-Atlantic, retaining high pollution levels in VOCs and sulfate aerosol. Upper level outflow events were found to have far lower sulfate aerosol, resulting from washout on ascent, but much higher PAN associated with the colder temperatures. Lagrangian links with flights of other aircraft over the USA and Europe show that such signatures are maintained many days downwind of emission regions. Some other features of the data set are highlighted, including the strong perturbations to many VOCs and OVOCs in this remote region.


Global Biogeochemical Cycles | 2004

Uptake of methanol to the North Atlantic Ocean surface

Lucy J. Carpenter; Alastair C. Lewis; J. R. Hopkins; K. A. Read; Ian Longley; Martin Gallagher

An anticorrelation between atmospheric methanol (CH 3 OH) concentrations and wind speed and a positive correlation between dimethylsulphide (DMS) concentrations and wind speed have been observed at the coastal air monitoring site of Mace Head in Ireland, during a period of cyclonic activity in which the averaged surface wind speed changed substantially as a low-pressure system evolved over the northeast Atlantic. These observations suggest a net air-to-sea flux of CH 3 OH. This conclusion is supported by the good agreement between the wind speed dependencies of the measured gas concentrations and theoretical predictions using wind-induced turbulent gas transfer velocities of DMS and CH 3 OH calculated from a resistance model, embedded in a photochemical box model. For a wind speed of 8 m s -1 , an ocean deposition rate of methanol of between 0.02 and 0.33 cm s -1 is calculated, with a best estimate of 0.09 cm s -1 , in good agreement with deposition rates used in global models and derived from atmospheric budgets. The large uncertainty in the calculated deposition rates is due almost entirely to the uncertainty in the degree of saturation of methanol in the surface ocean, highlighting the critical requirement for measurements of methanol in seawater. Owing to the dependence on wind speed, the deposition rates calculated showed substantial range and the calculated contribution of ocean deposition to total loss of CH 3 OH (ocean uptake and gas phase OH oxidation) varied from approximately 20% to 60%.


Faraday Discussions | 2005

Modelling the ambient distribution of organic compounds during the August 2003 ozone episode in the southern UK

Steven R. Utembe; Michael E. Jenkin; Richard G. Derwent; Alastair C. Lewis; J. R. Hopkins; Jacqueline F. Hamilton

A photochemical trajectory model containing speciated emissions of 124 non-methane volatile organic compounds (VOC), and a comprehensive description of the chemistry of VOC degradation, has been used to simulate the chemical evolution of boundary layer air masses arriving at a field campaign site in the southern UK during a widespread and prolonged photochemical pollution event in August 2003. The simulated concentrations and distributions of organic compounds at the arrival location are compared with observations of a series of hydrocarbons and carbonyl compounds, which were measured using GC-FID and multidimensional GC methods. The comparison of the simulated and observed distributions of 34 emitted hydrocarbons provides some support for the magnitude and applied emissions speciation of anthropogenic hydrocarbons, but is indicative of an under representation of the input of biogenic hydrocarbons, particularly at elevated temperatures. Simulations of the detailed distribution of ca. 1250 carbonyl compounds, formed primarily from the degradation of the 124 emitted VOC, focus on 61 aldehydes, ketones, dicarbonyls, hydroxycarbonyls and aromatic aldehydes which collectively account for ca. 90% of the simulated total molar concentration of carbonyls. The simulated distributions indicate that the photolysis of formaldehyde and alpha-dicarbonyls make major contributions to free radical production for the arrival conditions of five case study trajectories. The simulated concentrations of hydroxycarbonyls demonstrate preferential formation of the 1,4-substituted isomers (compared with 1,2- and 1,3-isomers of the same carbon number), which are formed during the initial oxidation sequence of longer chain alkanes.


Environmental Science & Technology | 2012

Multiannual observations of acetone, methanol, and acetaldehyde in remote tropical atlantic air: implications for atmospheric OVOC budgets and oxidative capacity.

K. A. Read; Lucy J. Carpenter; S. R. Arnold; Rachael Beale; Philip D. Nightingale; J. R. Hopkins; Alastair C. Lewis; James Lee; L. Mendes; S. J. Pickering

Oxygenated volatile organic compounds (OVOCs) in the atmosphere are precursors to peroxy acetyl nitrate (PAN), affect the tropospheric ozone budget, and in the remote marine environment represent a significant sink of the hydroxyl radical (OH). The sparse observational database for these compounds, particularly in the tropics, contributes to a high uncertainty in their emissions and atmospheric significance. Here, we show measurements of acetone, methanol, and acetaldehyde in the tropical remote marine boundary layer made between October 2006 and September 2011 at the Cape Verde Atmospheric Observatory (CVAO) (16.85° N, 24.87° W). Mean mixing ratios of acetone, methanol, and acetaldehyde were 546 ± 295 pptv, 742 ± 419 pptv, and 428 ± 190 pptv, respectively, averaged from approximately hourly values over this five-year period. The CAM-Chem global chemical transport model reproduced annual average acetone concentrations well (21% overestimation) but underestimated levels by a factor of 2 in autumn and overestimated concentrations in winter. Annual average concentrations of acetaldehyde were underestimated by a factor of 10, rising to a factor of 40 in summer, and methanol was underestimated on average by a factor of 2, peaking to over a factor of 4 in spring. The model predicted summer minima in acetaldehyde and acetone, which were not apparent in the observations. CAM-Chem was adapted to include a two-way sea-air flux parametrization based on seawater measurements made in the Atlantic Ocean, and the resultant fluxes suggest that the tropical Atlantic region is a net sink for acetone but a net source for methanol and acetaldehyde. Inclusion of the ocean fluxes resulted in good model simulations of monthly averaged methanol levels although still with a 3-fold underestimation in acetaldehyde. Wintertime acetone levels were better simulated, but the observed autumn levels were more severely underestimated than in the standard model. We suggest that the latter may be caused by underestimated terrestrial biogenic African primary and/or secondary OVOC sources by the model. The model underestimation of acetaldehyde concentrations all year round implies a consistent significant missing source, potentially from secondary chemistry of higher alkanes produced biogenically from plants or from the ocean. We estimate that low model bias in OVOC abundances in the remote tropical marine atmosphere may result in up to 8% underestimation of the global methane lifetime due to missing model OH reactivity. Underestimation of acetaldehyde concentrations is responsible for the bulk (∼70%) of this missing reactivity.


Journal of Geophysical Research | 2015

The first UK measurements of nitryl chloride using a chemical ionization mass spectrometer in central London in the summer of 2012, and an investigation of the role of Cl atom oxidation

Thomas J. Bannan; A. Murray Booth; Asan Bacak; Jennifer Muller; Kimberley E. Leather; Michael Le Breton; Benjamin Jones; Dominique E. Young; Hugh Coe; J. D. Allan; S. Visser; Jay G. Slowik; Markus Furger; André S. H. Prévôt; James Lee; Rachel E. Dunmore; J. R. Hopkins; Jacqueline F. Hamilton; Alastair C. Lewis; L. K. Whalley; Thomas Sharp; Daniel Stone; Dwayne E. Heard; Zoe L. Fleming; Roland J. Leigh; Dudley E. Shallcross; Carl J. Percival

The first nitryl chloride (ClNO2) measurements in the UK were made during the summer 2012 ClearfLo campaign with a chemical ionization mass spectrometer, utilizing an I− ionization scheme. Concentrations of ClNO2 exceeded detectable limits (11 ppt) every night with a maximum concentration of 724 ppt. A diurnal profile of ClNO2 peaking between 4 and 5 A.M., decreasing directly after sunrise, was observed. Concentrations of ClNO2 above the detection limit are generally observed between 8 P.M. and 11 A.M. Different ratios of the production of ClNO2:N2O5 were observed throughout with both positive and negative correlations between the two species being reported. The photolysis of ClNO2 and a box model utilizing the Master Chemical Mechanism modified to include chlorine chemistry was used to calculate Cl atom concentrations. Simultaneous measurements of hydroxyl radicals (OH) using low pressure laser-induced fluorescence and ozone enabled the relative importance of the oxidation of three groups of measured VOCs (alkanes, alkenes, and alkynes) by OH radicals, Cl atoms, and O3 to be compared. For the day with the maximum calculated Cl atom concentration, Cl atoms in the early morning were the dominant oxidant for alkanes and, over the entire day, contributed 15%, 3%, and 26% toward the oxidation of alkanes, alkenes, and alkynes, respectively.


Journal of Geophysical Research | 2007

Alkyl nitrates in outflow from North America over the North Atlantic during Intercontinental Transport of Ozone and Precursors 2004

C. E. Reeves; Jana Slemr; D. E. Oram; David R. Worton; S. A. Penkett; D. Stewart; R. M. Purvis; N. Watson; J. R. Hopkins; A. C. Lewis; John Methven; D. R. Blake; Elliot Atlas

This paper is based on alkyl nitrate measurements made over the North Atlantic as part of the International Consortium for Research on Atmospheric Transport and Transformation (ICARTT). The focus is on the analysis of air samples collected on the UK BAe-146 aircraft during the Intercontinental Transport of Ozone and Precursors (ITOP) project, but air samples collected on board the NASA DC-8 and NOAA WP-3D aircraft as part of a Lagrangian experiment are also used. The ratios between the alkyl nitrates and their parent hydrocarbons are compared with those expected from chemical theory. Further, a box model is run to investigate the temporal evolution of the alkyl nitrates in three Lagrangian case studies and compared to observations. The air samples collected during ITOP do not appear to be strongly influenced by oceanic sources, but rather are influenced by emissions from the N.E. United States and from Alaskan fires. There also appears to be a widespread common source of ethyl nitrate and 1-propyl nitrate other than from their parent hydrocarbons. The general agreement between the alkyl nitrate data and photochemical theory suggests that during the first few days of transport from the source region, photochemical production of alkyl nitrates, and thus ozone, had taken place. The observations in the more photochemically processed air masses are consistent with the alkyl nitrate production reactions no longer dominating the peroxy radical self/cross reactions. Further, the results also suggest that the rates of photochemical processing in the Alaskan smoke plumes were small.

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Hugh Coe

University of Manchester

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