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Dive into the research topics where Jack Harmer is active.

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Featured researches published by Jack Harmer.


PLOS ONE | 2014

Dual-Phase Cardiac Diffusion Tensor Imaging with Strain Correction

Christian T. Stoeck; Aleksandra Kalinowska; Constantin von Deuster; Jack Harmer; Rw Chan; Markus Niemann; Robert Manka; David Atkinson; David E. Sosnovik; Choukri Mekkaoui; Sebastian Kozerke

Purpose In this work we present a dual-phase diffusion tensor imaging (DTI) technique that incorporates a correction scheme for the cardiac material strain, based on 3D myocardial tagging. Methods In vivo dual-phase cardiac DTI with a stimulated echo approach and 3D tagging was performed in 10 healthy volunteers. The time course of material strain was estimated from the tagging data and used to correct for strain effects in the diffusion weighted acquisition. Mean diffusivity, fractional anisotropy, helix, transverse and sheet angles were calculated and compared between systole and diastole, with and without strain correction. Data acquired at the systolic sweet spot, where the effects of strain are eliminated, served as a reference. Results The impact of strain correction on helix angle was small. However, large differences were observed in the transverse and sheet angle values, with and without strain correction. The standard deviation of systolic transverse angles was significantly reduced from 35.9±3.9° to 27.8°±3.5° (p<0.001) upon strain-correction indicating more coherent fiber tracks after correction. Myocyte aggregate structure was aligned more longitudinally in systole compared to diastole as reflected by an increased transmural range of helix angles (71.8°±3.9° systole vs. 55.6°±5.6°, p<0.001 diastole). While diastolic sheet angle histograms had dominant counts at high sheet angle values, systolic histograms showed lower sheet angle values indicating a reorientation of myocyte sheets during contraction. Conclusion An approach for dual-phase cardiac DTI with correction for material strain has been successfully implemented. This technique allows assessing dynamic changes in myofiber architecture between systole and diastole, and emphasizes the need for strain correction when sheet architecture in the heart is imaged with a stimulated echo approach.


NMR in Biomedicine | 2014

High-resolution diffusion tensor imaging of the human kidneys using a free-breathing, multi-slice, targeted field of view approach.

Rw Chan; Constantin von Deuster; Christian T. Stoeck; Jack Harmer; Shonit Punwani; Sebastian Kozerke; David Atkinson

Fractional anisotropy (FA) obtained by diffusion tensor imaging (DTI) can be used to image the kidneys without any contrast media. FA of the medulla has been shown to correlate with kidney function. It is expected that higher spatial resolution would improve the depiction of small structures within the kidney. However, the achievement of high spatial resolution in renal DTI remains challenging as a result of respiratory motion and susceptibility to diffusion imaging artefacts. In this study, a targeted field of view (TFOV) method was used to obtain high‐resolution FA maps and colour‐coded diffusion tensor orientations, together with measures of the medullary and cortical FA, in 12 healthy subjects. Subjects were scanned with two implementations (dual and single kidney) of a TFOV DTI method. DTI scans were performed during free breathing with a navigator‐triggered sequence. Results showed high consistency in the greyscale FA, colour‐coded FA and diffusion tensors across subjects and between dual‐ and single‐kidney scans, which have in‐plane voxel sizes of 2 × 2 mm2 and 1.2 × 1.2 mm2, respectively. The ability to acquire multiple contiguous slices allowed the medulla and cortical FA to be quantified over the entire kidney volume. The mean medulla and cortical FA values were 0.38 ± 0.017 and 0.21 ± 0.019, respectively, for the dual‐kidney scan, and 0.35 ± 0.032 and 0.20 ± 0.014, respectively, for the single‐kidney scan. The mean FA between the medulla and cortex was significantly different (p < 0.001) for both dual‐ and single‐kidney implementations. High‐spatial‐resolution DTI shows promise for improving the characterization and non‐invasive assessment of kidney function.


European Heart Journal | 2013

In vivo myofibre architecture in the systemic right ventricle

Jack Harmer; Kuberan Pushparajah; Nicolas Toussaint; Christian T. Stoeck; Rw Chan; David Atkinson; Reza Razavi; Sebastian Kozerke

Heart failure in the systemic right ventricle (RV) is a common pathway in end-stage disease in patients affected with congenital heart disease. Using state-of-the-art magnetic resonance (MR) diffusion acquisition schemes, we present the first in vivo diffusion tensor imaging (DTI) data of the beating heart acquired in an adult with a systemic RV following an atrial switch procedure for transposition of the great arteries. Magnetic resonance-based DTI …


Journal of Magnetic Resonance | 2014

Characterization and correction of eddy-current artifacts in unipolar and bipolar diffusion sequences using magnetic field monitoring

Rw Chan; Constantin von Deuster; Daniel Giese; Christian T. Stoeck; Jack Harmer; Andy Aitken; David Atkinson; Sebastian Kozerke


Brain Topography | 2015

Assessing the Spatial Precision of SE and GE-BOLD Contrast at 7 Tesla

Rosa M. Sanchez Panchuelo; Denis Schluppeck; Jack Harmer; Richard Bowtell


In: (Proceedings) ISMRM 2013. (pp. 2099-). (2013) | 2013

Concurrent dual-slice cardiac DTI of the in-vivo human heart

C von Deuster; Ct Stoeck; Daniel Giese; Jack Harmer; Rw Chan; David Atkinson; Sebastian Kozerke


In: (Proceedings) ISMRM 2013. (pp. 3098-). (2013) | 2013

In-vivo Diffusion Tensor Imaging of the systemic right ventricle at 3T

Jack Harmer; Nicolas Toussaint; Kuberan Pushparajah; Christian T. Stoeck; Rw Chan; Reza Razavi; David Atkinson; Sebastian Kozerke


NMR in Biomedicine , 27 (11) pp. 1300-1312. (2014) | 2014

High-Resolution Diffusion Tensor Imaging (DTI) of the human kidneys using a free-breathing multi-slice targeted-FOV approach

Rw Chan; C von Deuster; Ct Stoeck; Jack Harmer; Shonit Punwani; Sebastian Kozerke; David Atkinson


In: (Proceedings) ISMRM. (pp. 671-). (2014) | 2014

Free-breathing cardiac DTI with simultaneous multi-slice excitation

Constantin von Deuster; Ct Stoeck; M Buehrer; Jack Harmer; Rw Chan; David Atkinson; Sebastian Kozerke


In: (Proceedings) ISMRM. (pp. 4461-). (2014) | 2014

Correction of off-resonance distortions in in-vivo cardiac diffusion tensor imaging

Jack Harmer; Rw Chan; Ct Stoeck; Constantin von Deuster; David Atkinson; Sebastian Kozerke

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David Atkinson

University College London

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Rw Chan

University College London

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Ct Stoeck

University of Cambridge

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