Jaclyn M. Hill

Stable isotope analysis indicates a lack of inter- and intra-specific dietary redundancy among ecologically important coral reef fishes

Parrotfish are critical consumers on coral reefs, mediating the balance between algae and corals, and are often categorised into three functional groups based on adult morphology and feeding behaviour. We used stable isotope analysis (δ13C, δ15N) to investigate size-related ontogenetic dietary changes in multiple species of parrotfish on coral reefs around Zanzibar. We compared signatures among species and functional groups (scrapers, excavators and browsers) as well as ontogenetic stages (immature, initial and terminal phase) within species. Stable isotope analysis suggests that ontogenetic dietary shifts occurred in seven of the nine species examined; larger individuals had enriched δ13C values, with no relationship between size and δ15N. The relationship between fish length and δ13C signature was maintained when species were categorised as scrapers and excavators, but was more pronounced for scrapers than excavators, indicating stronger ontogenetic changes. Isotopic mixing models classified the initial phase of both the most abundant excavator (Chlorurus sordidus) as a scraper and the immature stage of the scraper Scarus ghobban (the largest species) as an excavator, indicating that diet relates to size rather than taxonomy. The results indicate that parrotfish may show similar intra-group changes in diet with length, but that their trophic ecology is more complex than suggested by morphology alone. Stable isotope analyses indicate that feeding ecology may differ among species within functional groups, and according to ontogenetic stage within a species.

13C pulse-chase labeling comparative assessment of the active methanogenic archaeal community composition in the transgenic and nontransgenic parental rice rhizospheres

More and more investigations indicate that genetic modification has no significant or persistent effects on microbial community composition in the rice rhizosphere. Very few studies, however, have focused on its impact on functional microorganisms. This study completed a ¹³C-CO₂ pulse-chase labeling experiment comparing the potential effects of cry1Ab gene transformation on ¹³C tissue distribution and rhizosphere methanogenic archaeal community composition with its parental rice variety (Ck) and a distant parental rice variety (Dp). Results showed that ¹³C partitioning in aboveground biomass (mainly in stems) and roots of Dp was significantly lower than that of Ck. However, there were no significant differences in ¹³C partitioning between the Bt transgenic rice line (Bt) and Ck. RNA-stable isotope probing combined with clone library analyses inferred that the group Methanosaetaceae was the predominant methanogenic Archaea in all three rice rhizospheres. The active methanogenic archaeal community in the Bt rhizosphere was dominated by Methanosarcinaceae, Methanosaetaceae, and Methanomicrobiaceae, while there were only two main methanogenic clusters (Methanosaetaceae and Methanomicrobiaceae) in the Ck and Dp rhizospheres. These results indicate that the insertion of cry1Ab gene into the rice genome has the potential to result in the modification of methanogenic community composition in its rhizosphere.

Baseline isotope data for Spirodela sp.: Nutrient differentiation in aquatic systems

The excessive addition of nitrogen to watersheds is recognized as one of the main causes of the global deterioration of aquatic ecosystems and an increasing number of studies have shown that δ¹⁵N signatures of macrophytes may reflect the N-loading of the system under investigation. This study investigated isotopic equilibration rates and concentration level effects of KNO₃ and cow manure nutrient solutions on the δ¹⁵N and δ¹³C signatures, C/N ratios, % N and % C of Spirodela sp. over time, to determine the feasibility of their use in monitoring anthropogenic N-loading in freshwater systems. Spirodela δ¹⁵N signatures clearly distinguished between nutrient types within 2 days of introduction, with plants grown in KNO₃ showing extremely depleted δ¹⁵N values (-15.00 to -12.00‰) compared to those growing in cow manure (14.00-18.00‰). Isotopic equilibration rates could not be determined with certainty, but plant isotopic differentiation between nutrient regimes became apparent after 2 days and started to equilibrate by day 4. Concentration level effects were also apparent, with Spirodela tissue displaying more depleted and enriched δ¹⁵N values in higher concentrations of KNO₃ and cow manure respectively. δ¹³C signatures of some plants grown in manure were more enriched than plants grown in KNO₃ and reverse osmosis (RO) water. However, nutrient induced differences in δ¹³C were small and are likely to be obscured in the natural environment. Decreased C/N ratios and increases in plant % N in zero N concentration treatments confirmed the presence of a commensal cyanobacterial-duckweed association within Spirodela sp., reducing its effectiveness as an in-situ incubator in low nutrient environments. However, indications are that Spirodela may make a useful isotope monitoring tool under conditions of long-term, continuous nutrient inputs such as systems impacted by sewage outfalls and/or wastewater inputs.

A missing link in the estuarine nitrogen cycle?: Coupled nitrification-denitrification mediated by suspended particulate matter

In estuarine and coastal ecosystems, the majority of previous studies have considered coupled nitrification-denitrification (CND) processes to be exclusively sediment based, with little focus on suspended particulate matter (SPM) in the water column. Here, we present evidence of CND processes in the water column of Hangzhou Bay, one of the largest macrotidal embayments in the world. Spearman’s correlation analysis showed that SPM was negatively correlated with nitrate (rho = −0.372, P = 0.018) and marker genes for nitrification and denitrification in the water column were detected by quantitative PCR analysis. The results showed that amoA and nir gene abundances strongly correlated with SPM (all P < 0.01) and the ratio of amoA/nir strongly correlated with nitrate (rho = −0.454, P = 0.003). Furthermore, aggregates consisting of nitrifiers and denitrifiers on SPM were also detected by fluorescence in situ hybridization. Illumina MiSeq sequencing further showed that ammonia oxidizers mainly belonged to the genus Nitrosomonas, while the potential denitrifying genera Bradyrhizobium, Comamonas, Thauera, Stenotrophomonas, Acinetobacter, Anaeromyxobacter, Sulfurimonas, Paenibacillus and Sphingobacterium showed significant correlations with SPM (all P < 0.01). This study suggests that SPM may provide a niche for CND processes to occur, which has largely been missing from our understanding of nitrogen cycling in estuarine waters.

Synergies between research organisations and the wider community in enhancing weed biological control in South Africa

Biological control offers a cost effective and ecologically sustainable tool for the management of invasive alien plants. Its implementation, however, has historically been slow and poorly co-ordinated. In South Africa, as in many other countries, most aspects of biological control programmes were done by researchers, but from 1995 onwards, with the advent of the Working for Water Programme, a more inclusive approach to biological control has been adopted. In this paper, we report on the development of community-based biological control implementation programmes in South Africa, after 1995, and highlight a number of initiatives, including employing persons with disabilities at mass-rearing facilities and in particular, we outline a suite of educational and outreach programmes for the general public and for schools, which have increased capacity, education and employment in the field of weed biological control.

Morphologically similar, coexisting hard corals (Porites lobata and P. solida) display similar trophic isotopic ratios across reefs and depths

Recent studies using stable isotope analysis in scleractinian corals have highlighted strong inter- and intra-specific variability in isotopic ratios, but few have excluded the effects of morphology, which affects resource acquisition, potentially confounding this with metabolic differences among species. Differences in the stable isotopic (δ13C and δ15N) ratios of the coral host tissue and photosymbionts of two co-existing, morphologically similar Porites corals (P. lobata and P. solida) were examined across nested spatial scales (inter-reefs and intra-reef) and across depths in Zanzibar, Tanzania. There were few differences between species in either coral host or photosymbiont isotopic ratios, but the two tissues showed different spatial patterns. Photosymbionts showed variation only in their δ13C ratios, which differed among reefs, but not by depth. In contrast, the coral hosts differed in δ13C and δ15N values among reefs and also by depth. Within-reef differences among sites occurred only for photosymbionts at one reef. The absence of differences in isotopic ratios between the two Porites species across reefs and depths, confirms that highly related and morphologically similar scleractinian corals may occupy similar ecosystem niches, metabolising resources in a similar fashion. This suggests that resource partitioning among corals, and subsequent isotopic variability, is most likely driven by resource acquisition, rather than being inherently species-specific.

Evidence for a new regime shift between floating and submerged invasive plant dominance in South Africa

Classical biological control for the management of floating invasive plants has been highly successful in South Africa. However, restoring ecosystem services has been compromised by a new suite of submerged invasive plants. This study proposes that biological control of floating invasive macrophytes acts as a catalyst in a regime shift between floating and submerged invasive plant dominance. Regime shifts are large and sudden changes in the structure and functioning of ecosystems. The proposed shift is driven by the rapid decomposition of floating plants and subsequent increase in availability of nutrients and light. A mesocosm experiment explored the effect of biological control on floating Pistia stratiotes L. (Araceae) upon the growth of invasive submerged Egeria densa Planch. (Hydrocharitaceae), and native submerged plant species of the same family; Lagarosiphon major (Ridl.) Moss (Hydrocharitaceae). The results revealed a cascade effect of biological control of P. stratiotes on the availability of nitrogen, resulting in increased relative growth rates and invasive capacity for E. densa. In contrast, the native L. major could not compete with healthy or damaged P. stratiotes. These findings highlight the vulnerability of South African freshwater systems to submerged plant invasions and demonstrate the importance of a more holistic approach to invasive plant management.