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Featured researches published by James R. Perry.


Nature | 2013

Therapeutic efficacy of potent neutralizing HIV-1-specific monoclonal antibodies in SHIV-infected rhesus monkeys

Dan H. Barouch; James B. Whitney; Brian Moldt; Florian Klein; Thiago Y. Oliveira; Jinyan Liu; Kathryn E. Stephenson; Hui-Wen Chang; Karthik Shekhar; Sanjana Gupta; Joseph P. Nkolola; Michael S. Seaman; Kaitlin M. Smith; Erica N. Borducchi; Crystal Cabral; Jeffrey Y. Smith; Stephen Blackmore; Srisowmya Sanisetty; James R. Perry; Matthew Beck; Mark G. Lewis; William Rinaldi; Arup K. Chakraborty; Pascal Poignard; Michel C. Nussenzweig; Dennis R. Burton

Human immunodeficiency virus type 1 (HIV-1)-specific monoclonal antibodies with extraordinary potency and breadth have recently been described. In humanized mice, combinations of monoclonal antibodies have been shown to suppress viraemia, but the therapeutic potential of these monoclonal antibodies has not yet been evaluated in primates with an intact immune system. Here we show that administration of a cocktail of HIV-1-specific monoclonal antibodies, as well as the single glycan-dependent monoclonal antibody PGT121, resulted in a rapid and precipitous decline of plasma viraemia to undetectable levels in rhesus monkeys chronically infected with the pathogenic simian–human immunodeficiency virus SHIV-SF162P3. A single monoclonal antibody infusion afforded up to a 3.1 log decline of plasma viral RNA in 7 days and also reduced proviral DNA in peripheral blood, gastrointestinal mucosa and lymph nodes without the development of viral resistance. Moreover, after monoclonal antibody administration, host Gag-specific T-lymphocyte responses showed improved functionality. Virus rebounded in most animals after a median of 56 days when serum monoclonal antibody titres had declined to undetectable levels, although, notably, a subset of animals maintained long-term virological control in the absence of further monoclonal antibody infusions. These data demonstrate a profound therapeutic effect of potent neutralizing HIV-1-specific monoclonal antibodies in SHIV-infected rhesus monkeys as well as an impact on host immune responses. Our findings strongly encourage the investigation of monoclonal antibody therapy for HIV-1 in humans.


Science | 2015

Protective Efficacy of Adenovirus/Protein Vaccines Against SIV Challenges in Rhesus Monkeys

Dan H. Barouch; Galit Alter; Thomas A. Broge; Caitlyn Linde; Margaret E. Ackerman; Eric P. Brown; Erica N. Borducchi; Kaitlin M. Smith; Joseph P. Nkolola; Jinyan Liu; Jennifer Shields; Lily Parenteau; James B. Whitney; Peter Abbink; David Ng’ang’a; Michael S. Seaman; Christy L. Lavine; James R. Perry; Wenjun Li; Arnaud D. Colantonio; Mark G. Lewis; Bing Chen; Holger Wenschuh; Ulf Reimer; Michael Piatak; Jeffrey D. Lifson; Scott A. Handley; Herbert W. Virgin; Marguerite Koutsoukos; Clarisse Lorin

To defeat SIV, add a protein boost Despite 30 years of effort, no HIV-1 vaccine exists. Barouch et al. evaluated one promising strategy in rhesus macaques, a preclinical model commonly used to test potential HIV-1 vaccine candidates. They immunized monkeys with adenovirus-36 vectors engineered to express SIV (simian immunodeficiency virus) genes and then boosted them with a recombinant gp120 envelope glycoprotein (Env) from SIV. This regimen afforded greater protection than a strategy that instead used a viral vector–based boost. A parallel trial using a SHIV (simian/human immunodeficiency virus)–based vaccine and challenge model produced similar results. Whether this particular approach will be equally successful in humans remains to be tested. Science, this issue p. 320 A viral vector–recombinant envelope glycoprotein–based HIV-1 vaccine strategy protected 50% of monkeys from infection. Preclinical studies of viral vector–based HIV-1 vaccine candidates have previously shown partial protection against neutralization-resistant virus challenges in rhesus monkeys. In this study, we evaluated the protective efficacy of adenovirus serotype 26 (Ad26) vector priming followed by purified envelope (Env) glycoprotein boosting. Rhesus monkeys primed with Ad26 vectors expressing SIVsmE543 Env, Gag, and Pol and boosted with AS01B-adjuvanted SIVmac32H Env gp140 demonstrated complete protection in 50% of vaccinated animals against a series of repeated, heterologous, intrarectal SIVmac251 challenges that infected all controls. Protective efficacy correlated with the functionality of Env-specific antibody responses. Comparable protection was also observed with a similar Ad/Env vaccine against repeated, heterologous, intrarectal SHIV-SF162P3 challenges. These data demonstrate robust protection by Ad/Env vaccines against acquisition of neutralization-resistant virus challenges in rhesus monkeys.


Proceedings of the National Academy of Sciences of the United States of America | 2012

HIV-1 envelope trimer elicits more potent neutralizing antibody responses than monomeric gp120

James M. Kovacs; Joseph P. Nkolola; Hanqin Peng; Ann Cheung; James R. Perry; Caroline A. Miller; Michael S. Seaman; Dan H. Barouch; Bing Chen

HIV-1 envelope glycoprotein is the primary target for HIV-1–specific antibodies. The native HIV-1 envelope spike on the virion surface is a trimer, but trimeric gp140 and monomeric gp120 currently are believed to induce comparable immune responses. Indeed, most studies on the immunogenicity of HIV-1 envelope oligomers have revealed only marginal improvement over monomers. We report here that suitably prepared envelope trimers have nearly all the antigenic properties expected for native viral spikes. These stable, rigorously homogenous trimers have antigenic properties markedly different from those of monomeric gp120s derived from the same sequences, and they induce potent neutralizing antibody responses for a cross-clade set of tier 1 and tier 2 viruses with titers substantially higher than those elicited by the corresponding gp120 monomers. These results, which demonstrate that there are relevant immunologic differences between monomers and high-quality envelope trimers, have important implications for HIV-1 vaccine development.


The Journal of Infectious Diseases | 2013

First-in-human evaluation of the safety and immunogenicity of a recombinant adenovirus serotype 26 HIV-1 Env vaccine (IPCAVD 001).

Lindsey R. Baden; Stephen R. Walsh; Michael S. Seaman; Robert P. Tucker; Kathleen H. Krause; Alka Patel; Jennifer A. Johnson; Jane A. Kleinjan; Katherine E. Yanosick; James R. Perry; Elise Zablowsky; Peter Abbink; Lauren Peter; M. Justin Iampietro; Ann Cheung; Maria G. Pau; Mo Weijtens; Jaap Goudsmit; Edith Swann; Mark Wolff; Hayley Loblein; Raphael Dolin; Dan H. Barouch

BACKGROUND We report the first-in-human safety and immunogenicity assessment of a prototype Ad26 vector-based human immunodeficiency virus (HIV) vaccine in humans. METHODS Sixty Ad26-seronegative, healthy, HIV-uninfected subjects were enrolled in a randomized, double-blinded, placebo-controlled, dose-escalation phase 1 study. Five groups of 12 subjects received 10(9)-10(11) vp of the Ad26-EnvA vaccine (N = 10/group) or placebo (N = 2/group) at weeks 0 and 24 or weeks 0, 4, and 24. Safety and immunogenicity were assessed. RESULTS Self-limited reactogenicity was observed after the initial immunization at the highest (10(11) vp) dose. No product-related SAEs were observed. All subjects who received the Ad26-EnvA vaccine developed Ad26 NAb titers, EnvA-specific enzyme-linked immunosorbent assays (ELISA) titers, and EnvA-specific enzyme-linked immunospot assays (ELISPOT) responses. These responses persisted at week 52. At week 28 in the 10(9), 10(10), 10(11) vp 3-dose and the 10(10) and 5 × 10(10) vp 2-dose groups, geometric mean EnvA ELISA titers were 6113, 12 470, 8545, 3470, and 9655 and mean EnvA ELISPOT responses were 397, 178, 736, 196, and 1311 SFC/10(6) peripheral blood mononuclear cells, respectively. CONCLUSION This Ad26 vectored vaccine was generally safe and immunogenic at all doses tested. Reactogenicity was minimal with doses of 5 × 10(10) vp or less. Ad26 is a promising new vaccine vector for HIV-1. CLINICAL TRIALS REGISTRATION NCT00618605.


Journal of Virology | 2015

A Multivalent Clade C HIV-1 Env Trimer Cocktail Elicits a Higher Magnitude of Neutralizing Antibodies than Any Individual Component

Christine A. Bricault; James M. Kovacs; Joseph P. Nkolola; Karina Yusim; Elena E. Giorgi; Jennifer Shields; James R. Perry; Christy L. Lavine; Ann Cheung; Katharine Ellingson-Strouss; Cecelia Rademeyer; Glenda Gray; Carolyn Williamson; Leonidas Stamatatos; Michael S. Seaman; Bette T. Korber; Bing Chen; Dan H. Barouch

ABSTRACT The sequence diversity of human immunodeficiency virus type 1 (HIV-1) presents a formidable challenge to the generation of an HIV-1 vaccine. One strategy to address such sequence diversity and to improve the magnitude of neutralizing antibodies (NAbs) is to utilize multivalent mixtures of HIV-1 envelope (Env) immunogens. Here we report the generation and characterization of three novel, acute clade C HIV-1 Env gp140 trimers (459C, 405C, and 939C), each with unique antigenic properties. Among the single trimers tested, 459C elicited the most potent NAb responses in vaccinated guinea pigs. We evaluated the immunogenicity of various mixtures of clade C Env trimers and found that a quadrivalent cocktail of clade C trimers elicited a greater magnitude of NAbs against a panel of tier 1A and 1B viruses than any single clade C trimer alone, demonstrating that the mixture had an advantage over all individual components of the cocktail. These data suggest that vaccination with a mixture of clade C Env trimers represents a promising strategy to augment vaccine-elicited NAb responses. IMPORTANCE It is currently not known how to generate potent NAbs to the diverse circulating HIV-1 Envs by vaccination. One strategy to address this diversity is to utilize mixtures of different soluble HIV-1 envelope proteins. In this study, we generated and characterized three distinct, novel, acute clade C soluble trimers. We vaccinated guinea pigs with single trimers as well as mixtures of trimers, and we found that a mixture of four trimers elicited a greater magnitude of NAbs than any single trimer within the mixture. The results of this study suggest that further development of Env trimer cocktails is warranted.


Vaccine | 2014

Comparison of multiple adjuvants on the stability and immunogenicity of a clade C HIV-1 gp140 trimer

Joseph P. Nkolola; Ann Cheung; James R. Perry; Darrick Carter; Steve Reed; Hanneke Schuitemaker; Maria Grazia Pau; Michael S. Seaman; Bing Chen; Dan H. Barouch

Immunogens based on the human immunodeficiency virus type-1 (HIV-1) Envelope (Env) glycoprotein have to date failed to elicit potent and broadly neutralizing antibodies against diverse HIV-1 strains. An understudied area in the development of HIV-1 Env-based vaccines is the impact of various adjuvants on the stability of the Env immunogen and the magnitude of the induced humoral immune response. We hypothesize that optimal adjuvants for HIV-1 gp140 Env trimers will be those with high potency but also those that preserve structural integrity of the immunogen and those that have a straightforward path to clinical testing. In this report, we systematically evaluate the impact of 12 adjuvants on the stability and immunogenicity of a clade C (CZA97.012) HIV-1 gp140 trimer in guinea pigs and a subset in non-human primates. Oil-in-water emulsions (GLA-emulsion, Ribi, Emulsigen) resulted in partial aggregation and loss of structural integrity of the gp140 trimer. In contrast, alum (GLA-alum, Adju-Phos, Alhydrogel), TLR (GLA-aqueous, CpG, MPLA), ISCOM (Matrix M) and liposomal (GLA-liposomes, virosomes) adjuvants appeared to preserve trimer integrity as measured by size exclusion chromatography. However, multiple classes of adjuvants similarly augmented Env-specific binding and neutralizing antibody responses in guinea pigs and non-human primates.


Journal of Virology | 2014

Characterization and Immunogenicity of a Novel Mosaic M HIV-1 gp140 Trimer

Joseph P. Nkolola; Christine A. Bricault; Ann Cheung; Jennifer Shields; James R. Perry; James M. Kovacs; Elena E. Giorgi; Margot van Winsen; Adrian Apetri; Els C. M. Brinkman-van der Linden; Bing Chen; Bette T. Korber; Michael S. Seaman; Dan H. Barouch

ABSTRACT The extraordinary diversity of the human immunodeficiency virus type 1 (HIV-1) envelope (Env) glycoprotein poses a major challenge for the development of an HIV-1 vaccine. One strategy to circumvent this problem utilizes bioinformatically optimized mosaic antigens. However, mosaic Env proteins expressed as trimers have not been previously evaluated for their stability, antigenicity, and immunogenicity. Here, we report the production and characterization of a stable HIV-1 mosaic M gp140 Env trimer. The mosaic M trimer bound CD4 as well as multiple broadly neutralizing monoclonal antibodies, and biophysical characterization suggested substantial stability. The mosaic M trimer elicited higher neutralizing antibody (nAb) titers against clade B viruses than a previously described clade C (C97ZA.012) gp140 trimer in guinea pigs, whereas the clade C trimer elicited higher nAb titers than the mosaic M trimer against clade A and C viruses. A mixture of the clade C and mosaic M trimers elicited nAb responses that were comparable to the better component of the mixture for each virus tested. These data suggest that combinations of relatively small numbers of immunologically complementary Env trimers may improve nAb responses. IMPORTANCE The development of an HIV-1 vaccine remains a formidable challenge due to multiple circulating strains of HIV-1 worldwide. This study describes a candidate HIV-1 Env protein vaccine whose sequence has been designed by computational methods to address HIV-1 diversity. The characteristics and immunogenicity of this Env protein, both alone and mixed together with a clade C Env protein vaccine, are described.


Journal of Virology | 2011

High Cell-Free Virus Load and Robust Autologous Humoral Immune Responses in Breast Milk of Simian Immunodeficiency Virus-Infected African Green Monkeys

Andrew B. Wilks; James R. Perry; Elizabeth P. Ehlinger; Roland C. Zahn; Robert White; Marie Claire Gauduin; Angela Carville; Michael S. Seaman; Joern E. Schmitz; Sallie R. Permar

ABSTRACT The design of immunologic interventions to prevent postnatal transmission of human immunodeficiency virus (HIV) will require identification of protective immune responses in this setting. Simian immunodeficiency virus (SIV)-infected rhesus monkeys (RMs), a species that develops an AIDS-like illness following experimental infection, transmit the virus at a high rate during breastfeeding. In contrast, postnatal transmission of SIV occurs rarely or not at all in natural, asymptomatic primate hosts of SIV. These contrasting transmission patterns provide a unique opportunity to study mechanisms that evolved to protect suckling infants from SIV infection. We compared the virologic and immunologic properties of milk of SIV-infected and uninfected natural hosts of SIV, African green monkeys (AGMs), to that of RMs. Interestingly, despite a low number of milk CD4+ T lymphocytes in uninfected AGMs, milk virus RNA load in SIV-infected AGMs was comparable to that of SIV-infected RMs and that in AGM plasma. This observation is in contrast to the relatively low virus load in milk compared to that in plasma of SIV-infected RMs and HIV-infected women. Milk of SIV-infected AGMs also displayed robust virus-specific cellular immune responses. Importantly, an autologous challenge virus-specific neutralization response was detected in milk of five of six SIV-infected AGMs that was comparable in magnitude to that in plasma. In contrast, autologous challenge virus neutralization was not detectable in milk of SIV-infected RMs. The autologous virus-specific adaptive immune responses in breast milk of AGMs may contribute to impedance of virus transmission in the infant oral/gastrointestinal tract and the rarity of postnatal virus transmission in natural hosts of SIV.


Retrovirology | 2012

HIV-1 envelope trimer elicits higher neutralizing antibody responses than monomeric gp120

Jm Kovacs; Joseph P. Nkolola; Hanqin Peng; Ann Cheung; James R. Perry; Caroline A. Miller; Seaman; Dan H. Barouch; Bing Chen

Background HIV-1 envelope glycoprotein is the primary target for HIV1-specific antibodies. The native HIV-1 envelope spike on the virion surface is a trimer, but trimeric gp140 and monomeric gp120 are currently believed to induce comparable immune responses. Indeed, most studies on the immunogenicity of HIV-1 envelope oligomers have revealed only marginal improvement over monomers. We report here that stable and homogenous envelope trimers with characteristics expected for the native viral spikes are substantially superior at eliciting neutralizing antibodies in guinea pigs. Methods Stable envelope gp140 trimer derived from clinical isolate sequences were stabilized with the T4-fibritin C-terminal trimerization tag and produced in stablely transfected 293T cells. Characterization of Env trimers was performed by Western blotting, size-exclusion chromatography (SEC), analytical-ultra centrifugation (AUC), multi-angle light scattering (MALS) and surface plasmon resonance (SPR). Guinea pigs were immunized six times with 100 µg of protein trimer or monomer in CpG/Emulsigen adjuvants. Antibody responses were determined by ELISA and TZM.bl neutralizing antibody assays. Results Homogeneous trimer and monomer preparations exhibited high purity as measured by SEC and SDS-PAGE. AUC and MALS analyses revealed expected molecular weight for both trimer and monomer. SPR analyses revealed expected binding with CD4 and multiple broadly neutralizing antibodies. These trimers have markedly different antigenic properties than those of monomeric gp120s derived from the same sequences. They induce potent, cross-clade neutralizing antibody responses with titers substantially higher than those elicited by the corresponding gp120 monomers for a diverse set of both tier 1 and tier 2 viruses. Conclusion We have demonstrated the importance of generating highquality envelope trimers for antigenic and immunogenic studies; furthermore these results highlight the immunologic differences between monomers and high-quality envelope trimers, illustrating important implications for HIV-1 vaccine development and immunogen selection in large clinical trials.


Nature Medicine | 2010

Mosaic HIV-1 vaccines expand the breadth and depth of cellular immune responses in rhesus monkeys

Dan H. Barouch; Kara L. O'Brien; Nathaniel L. Simmons; Sharon L. King; Peter Abbink; Lori F. Maxfield; Ying-Hua B Sun; Annalena La Porte; Ambryice M. Riggs; Diana M. Lynch; Sarah Clark; Katherine Backus; James R. Perry; Michael S. Seaman; Angela Carville; Keith G. Mansfield; James Szinger; Will Fischer; Mark J. Muldoon; Bette T. Korber

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Dan H. Barouch

Beth Israel Deaconess Medical Center

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Michael S. Seaman

Beth Israel Deaconess Medical Center

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Joseph P. Nkolola

Beth Israel Deaconess Medical Center

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Ann Cheung

Beth Israel Deaconess Medical Center

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Jennifer Shields

Beth Israel Deaconess Medical Center

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Bette T. Korber

Los Alamos National Laboratory

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Christine A. Bricault

Beth Israel Deaconess Medical Center

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Peter Abbink

Beth Israel Deaconess Medical Center

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