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Featured researches published by James S. Franks.


Aquaculture | 1994

CULTURE OF COBIA (RACHYCENTRON-CANADUM) - CRYOPRESERVATION OF SPERM AND INDUCED SPAWNING

Robert E. Caylor; Patricia M. Biesiot; James S. Franks

Abstract Studies toward the development of cobia ( Rachycentron canadum ) aquaculture were initiated. Methods of cryopreserving cobia sperm were compared and sperm motility was assessed after longterm frozen storage. Sperm stored in 10% dimethyl sulfoxide, 3 mM glucose, and 10% raw chicken egg yolk showed approximately 100% motility upon thawing after more than 1 year of storage at −80°C. Sperm motility declined after about 60 min at room temperature, but approximately 100% motility could be restored by addition of a few drops of 5 mM theophylline. Ripe, wild-caught female cobia were held in recirculating seawater systems and ovulation was induced by injection of human chorionic gonadotropin at a concentration of 275 IU/kg of body weight. Fertilization was attempted using the cryopreserved sperm. Although fertilization did not occur, we are optimistic that cobia aquaculture is feasible.


Environmental Biology of Fishes | 2009

Validation of yellowedge grouper, Epinephelus flavolimbatus, age using nuclear bomb-produced radiocarbon

Melissa Cook; Gary R. Fitzhugh; James S. Franks

Age validation and estimates of longevity of yellowedge grouper (Epinephelus flavolimbatus) from the Gulf of Mexico (GOM) are needed to inform fishery management decisions. Yellowedge grouper sagittal otoliths (n = 100) were collected, aged using conventional means, and cores were submitted for radiocarbon (14C) measurement. Radiocarbon values of yellowedge grouper otoliths were compared to established radiocarbon chronologies in the region to validate the age and ageing methodology of this species. The yellowedge grouper chronology displayed a similar sigmoidal trend as previously published chronologies. In addition to the core analysis, multiple areas on otolith sections from eight specimens were analyzed for Δ14C to validate age estimates for fish born prior to the 14C increase. Our results indicate that yellowedge grouper live longer than previously reported (minimum of 40 years based on radiocarbon measurements). The validated ageing methodology supported an estimated maximum longevity of 85 years and established that yellowedge grouper have the longest lifespan currently known for any species of grouper in the GOM. Results also indicate a depth-age interaction in that material extracted from adult otolith sections assigned to post-bomb dates exhibited lower Δ14C values than cores (juvenile material) assigned to the same post-bomb dates. This finding is likely explained by lower 14C levels reported from water masses at deeper depths (>100 m) which are inhabited by adults.


Systematic Parasitology | 2013

Hirudinella ventricosa (Pallas, 1774) Baird, 1853 represents a species complex based on ribosomal DNA

Dana M. Calhoun; Stephanie M. Curran; Eric E. Pulis; Jennifer M. Provaznik; James S. Franks

Digeneans in the genus Hirudinella de Blainville, 1828 (Hirudinellidae) from three species of pelagic fishes, Acanthocybiumsolandri (Cuvier), Makairanigricans Lacépède and Thunnusalbacares (Bonnaterre), and one benthic fish, Mulloidichthysmartinicus (Cuvier), from the Gulf of Mexico are investigated using comparison of ribosomal DNA. Four species are identified based on molecular differences: Hirudinella ventricosa (Pallas, 1774) Baird, 1853 from A. solandri, Hirudinellaahi Yamaguti, 1970 from T. albacares, and two unidentified but distinct species of Hirudinella, herein referred to as Hirudinella sp. A (from both M. nigricans and M. martinicus) and Hirudinella sp. B from M. nigricans. Additionally, H. ahi, based tentatively on morphological identification, is reported from Thunnusthynnus (Linnaeus). This represents the first record of a hirudinellid from M.martinicus and the first record of H. ahi from T. thynnus. A phylogeny of some Hemiurata Skrjabin & Guschanskaja, 1954 using partial fragments of the 28S rDNA sequences is consistent with earlier phylogenies and the position of the Hirudinellidae Dollfus, 1932 is well-supported as a derived group most closely related to the Syncoeliidae Looss, 1899.


Transactions of The American Fisheries Society | 2016

Estimation of the Length-at-Age Relationship of Mississippi's Spotted Seatrout

David A. Dippold; Robert T. Leaf; J. Read Hendon; James S. Franks

AbstractSpotted Seatrout Cynoscion nebulosus are a highly valued recreational inshore species in Mississippi coastal waters. The accurate description of the length-at-age relationship is critical for assessment efforts of the stock. Because Spotted Seatrout exhibit small-scale movements, the stocks in the Gulf of Mexico are managed as state-specific units. Therefore, local demographic estimates of length at age are needed for assessment. We estimated the length-at-age relationship of Spotted Seatrout in Mississippi by using tag recapture records and otolith-derived age estimates. Three nonlinear length-at-age models were fit to sex-aggregated, tag recapture data and four nonlinear length-at-age models were fit to sex-specific, otolith-derived age data. For each suite of models, model support was determined using Akaike information criteria. The Francis (1988a) GROTAG method had the greatest support of the three models fit to the tag recapture data, and the resulting parameter estimates from the model were...


Fisheries | 2016

AFS Position Paper and Policy on Mining and Fossil Fuel Extraction

Robert M. Hughes; Felipe Amezcua; David M. Chambers; Wesley M. Daniel; James S. Franks; William G. Franzin; Donald MacDonald; Eric R. Merriam; George Neall; Paulo Santos Pompeu; Lou Reynolds; Carol Ann Woody

Following a four-year period of writing, member comment, and multiple revisions, the AFS Position Paper and Policy on Mining and Fossil Fuel Extraction was approved unanimously by the membership at the Societys annual business meeting August 19, 2015, in Portland, Oregon. The entire document can be read at fisheries.org/policy_statements; a brief summary follows.


Molecular Ecology Resources | 2018

Spatial dynamics and mixing of bluefin tuna in the Atlantic Ocean and Mediterranean Sea revealed using next-generation sequencing

Gregory Neils Puncher; Alessia Cariani; Gregory E. Maes; Jeroen Van Houdt; Koen Herten; Rita Cannas; Naiara Rodriguez-Ezpeleta; Aitor Albaina; Andone Estonba; Molly Lutcavage; Alex Hanke; Jay R. Rooker; James S. Franks; Joseph M. Quattro; Gualtiero Basilone; Igaratza Fraile; Urtzi Laconcha; Nicolas Goñi; Ai Kimoto; David Macías; Francisco Alemany; Simeon Deguara; Salem Zgozi; Fulvio Garibaldi; I. K. Oray; Firdes Saadet Karakulak; Noureddine Abid; Miguel N. Santos; Piero Addis; Haritz Arrizabalaga

The Atlantic bluefin tuna is a highly migratory species emblematic of the challenges associated with shared fisheries management. In an effort to resolve the species’ stock dynamics, a genomewide search for spatially informative single nucleotide polymorphisms (SNPs) was undertaken, by way of sequencing reduced representation libraries. An allele frequency approach to SNP discovery was used, combining the data of 555 larvae and young‐of‐the‐year (LYOY) into pools representing major geographical areas and mapping against a newly assembled genomic reference. From a set of 184,895 candidate loci, 384 were selected for validation using 167 LYOY. A highly discriminatory genotyping panel of 95 SNPs was ultimately developed by selecting loci with the most pronounced differences between western Atlantic and Mediterranean Sea LYOY. The panel was evaluated by genotyping a different set of LYOY (n = 326), and from these, 77.8% and 82.1% were correctly assigned to western Atlantic and Mediterranean Sea origins, respectively. The panel revealed temporally persistent differentiation among LYOY from the western Atlantic and Mediterranean Sea (FST = 0.008, p = .034). The composition of six mixed feeding aggregations in the Atlantic Ocean and Mediterranean Sea was characterized using genotypes from medium (n = 184) and large (n = 48) adults, applying population assignment and mixture analyses. The results provide evidence of persistent population structuring across broad geographic areas and extensive mixing in the Atlantic Ocean, particularly in the mid‐Atlantic Bight and Gulf of St. Lawrence. The genomic reference and genotyping tools presented here constitute novel resources useful for future research and conservation efforts.


Fishery Bulletin | 2017

Growth, mortality, and movement of cobia (Rachycentron canadum)

David A. Dippold; Robert T. Leaf; James S. Franks; J. Read Hendon

1 Division of Coastal Sciences The University of Southern Mississippi 703 East Beach Drive Ocean Springs, Mississippi 39564 Present address for contact author: Department of Evolution, Ecology, and Organismal Biology The Ohio State University 1314 Kinnear Road Columbus, Ohio 43212 2 Center for Fisheries Research and Development Gulf Coast Research Laboratory The University of Southern Mississippi 703 East Beach Drive Ocean Springs, Mississippi 39564


Fishery Bulletin | 2001

Reproductive Biology of Cobia, Rachycentron canadum, from Coastal Waters of the Southern United States

Nancy J. Brown-Peterson; Robin M. Overstreet; Jeffrey M. Lotz; James S. Franks; Karen M. Burns


Fishery Bulletin | 1999

Age and Growth of Cobia, Rachycentron canadum, from the Northeastern Gulf of Mexico

James S. Franks; James R. Warren; Michael V. Buchanan


Marine Biology | 2005

Population genetic and phylogeographic structure of wahoo, Acanthocybium solandri, from the western central Atlantic and central Pacific Oceans

Amber F. Garber; M. D. Tringali; James S. Franks

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Eric R. Hoffmayer

National Marine Fisheries Service

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Nancy J. Brown-Peterson

University of Southern Mississippi

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William B. Driggers

National Marine Fisheries Service

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J. Read Hendon

University of Southern Mississippi

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Amber F. Garber

North Carolina State University

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Jason D Tilley

University of Southern Mississippi

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Jennifer A. McKinney

Louisiana Department of Wildlife and Fisheries

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Jill M. Hendon

University of Southern Mississippi

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Joseph M. Quattro

University of South Carolina

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Mark S. Peterson

University of Southern Mississippi

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