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Dive into the research topics where Javier Cáceres del Carpio is active.

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Featured researches published by Javier Cáceres del Carpio.


Biochimica et Biophysica Acta | 2014

Molecular and bioenergetic differences between cells with African versus European inherited mitochondrial DNA haplogroups: Implications for population susceptibility to diseases

M. Cristina Kenney; Marilyn Chwa; Shari R. Atilano; Payam Falatoonzadeh; Claudio Ramirez; Deepika Malik; Mohamed Tarek; Javier Cáceres del Carpio; Anthony B. Nesburn; David S. Boyer; Baruch D. Kuppermann; Marquis P. Vawter; S. Michal Jazwinski; Michael V. Miceli; Douglas C. Wallace; Nitin Udar

The geographic origins of populations can be identified by their maternally inherited mitochondrial DNA (mtDNA) haplogroups. This study compared human cybrids (cytoplasmic hybrids), which are cell lines with identical nuclei but mitochondria from different individuals with mtDNA from either the H haplogroup or L haplogroup backgrounds. The most common European haplogroup is H while individuals of maternal African origin are of the L haplogroup. Despite lower mtDNA copy numbers, L cybrids had higher expression levels for nine mtDNA-encoded respiratory complex genes, decreased ATP (adenosine triphosphate) turnover rates and lower levels of reactive oxygen species production, parameters which are consistent with more efficient oxidative phosphorylation. Surprisingly, GeneChip arrays showed that the L and H cybrids had major differences in expression of genes of the canonical complement system (5 genes), dermatan/chondroitin sulfate biosynthesis (5 genes) and CCR3 (chemokine, CC motif, receptor 3) signaling (9 genes). Quantitative nuclear gene expression studies confirmed that L cybrids had (a) lower expression levels of complement pathway and innate immunity genes and (b) increased levels of inflammation-related signaling genes, which are critical in human diseases. Our data support the hypothesis that mtDNA haplogroups representing populations from different geographic origins may play a role in differential susceptibilities to diseases.


British Journal of Ophthalmology | 2014

Safety profiles of anti-VEGF drugs: bevacizumab, ranibizumab, aflibercept and ziv-aflibercept on human retinal pigment epithelium cells in culture

Deepika Malik; Mohamed Tarek; Javier Cáceres del Carpio; Claudio Ramirez; David S. Boyer; M. Cristina Kenney; Baruch D. Kuppermann

Purpose To compare the safety profiles of antivascular endothelial growth factor (VEGF) drugs ranibizumab, bevacizumab, aflibercept and ziv-aflibercept on retinal pigment epithelium cells in culture. Methods Human retinal pigment epithelium cells (ARPE-19) were exposed for 24 h to four anti-VEGF drugs at 1/2×, 1×, 2× and 10× clinical concentrations. Cell viability and mitochondrial membrane potential assay were performed to evaluate early apoptotic changes and rate of overall cell death. Results Cell viability decreased at 10× concentrations in bevacizumab (82.38%, p=0.0001), aflibercept (82.68%, p=0.0002) and ziv-aflibercept (77.25%, p<0.0001), but not at lower concentrations. However, no changes were seen in cell viability in ranibizumab-treated cells at all concentrations including 10×. Mitochondrial membrane potential was slightly decreased in 10× ranibizumab-treated cells (89.61%, p=0.0006) and 2× and 10× aflibercept-treated cells (88.76%, 81.46%; p<0.01, respectively). A larger reduction in mitochondrial membrane potential was seen at 1×, 2× and 10× concentrations of bevacizumab (86.53%, 74.38%, 66.67%; p<0.01) and ziv-aflibercept (73.50%, 64.83% and 49.65% p<0.01) suggestive of early apoptosis at lower doses, including the clinical doses. Conclusions At clinical doses, neither ranibizumab nor aflibercept produced evidence of mitochondrial toxicity or cell death. However, bevacizumab and ziv-aflibercept showed mild mitochondrial toxicity at clinically relevant doses.


Investigative Ophthalmology & Visual Science | 2014

Mitochondrial Membrane Potential Response of Retinal Pigment Epithelium Cells In Vitro to Anti-VEGF Agents: Ranibizumab, Bevacizumab, Aflibercept and Ziv-aflibercept

Deepika Malik; Javier Cáceres del Carpio; Young Gyun Kim; Mohamed Tarek Mohamed Moustafa; Kunal Thaker; Tej Patel; Simon R Bababeygy; Cristina M Kenney; B.D. Kuppermann


Investigative Ophthalmology & Visual Science | 2014

Different Epigenetic Methylation Patterns in Cells with African versus European Inherited Mitochondrial DNA Haplogroups: Possible Mechanism for Disease Susceptibilities?

Cristina M Kenney; Deepika Malik; Shari R. Atilano; Javier Cáceres del Carpio; Marilyn Chwa; Anthony B. Nesburn; David S. Boyer; B.D. Kuppermann; Nitin Udar


Investigative Ophthalmology & Visual Science | 2014

Effects of Ranibizumab, Bevacizumab, Aflibercept and Ziv-aflibercept on Cultured Human Retinal Müller Cells

Javier Cáceres del Carpio; Mohamed Tarek Mohamed Moustafa; Claudio Ramirez; Deepika Malik; Young Gyun Kim; Kunal Thaker; Tej Patel; G. Astrid Limb; Cristina M Kenney; B.D. Kuppermann


Investigative Ophthalmology & Visual Science | 2014

Differential Expression of Wnt Signaling Genes in African Versus European Inherited Mitochondrial DNA Haplogroups: Implications for Retinal Diseases.

Young Gyun Kim; Deepika Malik; Payam Falatoonzadeh; Javier Cáceres del Carpio; Mohamed Tarek Mohamed Moustafa; Shari R. Atilano; Micheal Miceli; Michal Jazwinski; B.D. Kuppermann; Cristina M Kenney


Investigative Ophthalmology & Visual Science | 2014

Safety Profile of Anti-VEGF Agents on Retinal Pigment Epithelium Cells: In Vitro Cell Viability

Simon R Bababeygy; Deepika Malik; Javier Cáceres del Carpio; David S. Boyer; Cristina M Kenney; B.D. Kuppermann


Investigative Ophthalmology & Visual Science | 2013

Differences in Reactive Oxygen Species (ROS) Production and Expression of Genes from the Complement and Inflammatory Pathways Between H and K Haplogroup Cybrids

Javier Cáceres del Carpio; Mohamed Tarek; Claudio Ramirez; Payam Falatoonzadeh; Marilyn Chwa; Deepika Malik; S. Michal Jazwinski; Miceli Michael; B.D. Kuppermann; Cristina M Kenney


Investigative Ophthalmology & Visual Science | 2013

An In-Vitro Study of the Effect of Ultraviolet Radiation on Growth Patterns and Gene Expression of Human ARPE-19 Cybrid H and J, and their Implications with Age-related Macular Degeneration (AMD)

Deepika Malik; Payam Falatoonzadeh; Tiffany Hsu; Claudio Ramirez; Javier Cáceres del Carpio; Mohamed Tarek Mohamed Moustafa; S. Michal Jazwinski; Miceli Michael; Cristina M Kenney; B.D. Kuppermann


Investigative Ophthalmology & Visual Science | 2013

Comparison Study of IL-33 Gene Expression in Haplogroup H, J, L, and K Cybrids

Thomas A. Vo; Marilyn Chwa; Shari R. Atilano; Deepika Malik; Claudio Ramirez; Javier Cáceres del Carpio; S. Michal Jazwinski; Miceli Michael; B.D. Kuppermann; Cristina M Kenney

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Deepika Malik

University of California

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Marilyn Chwa

University of California

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Mohamed Tarek

University of California

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