Jean-François Joly
Carleton University
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Publication
Featured researches published by Jean-François Joly.
Journal of Atomic and Molecular Physics | 2012
Normand Mousseau; Laurent Karim Béland; Peter Brommer; Jean-François Joly; Fedwa El-Mellouhi; Eduardo Machado-Charry; Mihai-Cosmin Marinica; Pascal Pochet
The evolution of many systems is dominated by rare activated events that occur on timescale ranging from nanoseconds to the hour or more. For such systems, simulations must leave aside the full thermal description to focus specifically on mechanisms that generate a configurational change. We present here the activation relaxation technique (ART), an open-ended saddle point search algorithm, and a series of recent improvements to ART nouveau and kinetic ART, an ART-based on-the-fly off-lattice self-learning kinetic Monte Carlo method.
Physical Review B | 2014
Peter Brommer; Laurent Karim Béland; Jean-François Joly; Normand Mousseau
Vacancy diffusion and clustering processes in body-centered cubic (bcc) Fe are studied using the kinetic Activation-Relaxation Technique (k-ART), an off-lattice kinetic Monte Carlo (KMC) method with on-the-fly catalog building capabilities. For mono- and di-vacancies, k-ART recovers previously published results while clustering in a 50-vacancy simulation box agrees with experimental estimates. Applying k-ART to the study of clustering pathways for systems containing from 1 to 6 vacancies, we find a rich set of diffusion mechanisms. In particular we show that the path followed to reach a hexavacancy cluster influences greatly the associated mean-square displacement. Aggregation in a 50-vacancy box also shows a notable dispersion in relaxation time associated with effective barriers varying from 0.84 to 1.1 eV depending on the exact pathway selected. We isolate the effects of long-range elastic interactions between defects by comparing to simulations where those effects are deliberately suppressed. This allows us to demonstrate that in bcc Fe, suppressing long-range interactions mainly influences kinetics in the first 0.3 ms, slowing down quick energy release cascades seen more frequently in full simulations, whereas long-term behavior and final state are not significantly affected.
Journal of Physics: Conference Series | 2012
Jean-François Joly; Laurent Karim Béland; Peter Brommer; Fedwa El-Mellouhi; Normand Mousseau
We present two major optimizations for the kinetic Activation-Relaxation Technique (k-ART), an off-lattice self-learning kinetic Monte Carlo (KMC) algorithm with on-the-fly event search THAT has been successfully applied to study a number of semiconducting and metallic systems. K-ART is parallelized in a non-trivial way: A master process uses several worker processes to perform independent event searches for possible events, while all bookkeeping and the actual simulation is performed by the master process. Depending on the complexity of the system studied, the parallelization scales well for tens to more than one hundred processes. For dealing with large systems, we present a near order 1 implementation. Techniques such as Verlet lists, cell decomposition and partial force calculations are implemented, and the CPU time per time step scales sublinearly with the number of particles, providing an efficient use of computational resources.
Journal of Chemical Theory and Computation | 2015
Gawonou Kokou N’Tsouaglo; Laurent Karim Béland; Jean-François Joly; Peter Brommer; Normand Mousseau; Pascal Pochet
The efficiency of minimum-energy configuration searching algorithms is closely linked to the energy landscape structure of complex systems, yet these algorithms often include a number of steps of which the effect is not always clear. Decoupling these steps and their impacts can allow us to better understand both their role and the nature of complex energy landscape. Here, we consider a family of minimum-energy algorithms based, directly or indirectly, on the well-known Bell-Evans-Polanyi (BEP) principle. Comparing trajectories generated with BEP-based algorithms to kinetically correct off-lattice kinetic Monte Carlo schemes allow us to confirm that the BEP principle does not hold for complex systems since forward and reverse energy barriers are completely uncorrelated. As would be expected, following the lowest available energy barrier leads to rapid trapping. This is why BEP-based methods require also a direct handling of visited basins or barriers. Comparing the efficiency of these methods with a thermodynamical handling of low-energy barriers, we show that most of the efficiency of the BEP-like methods lie first and foremost in the basin management rather than in the BEP-like step.
Physical Review Letters | 2013
Laurent Karim Béland; Y. Anahory; Dries Smeets; M. Guihard; Peter Brommer; Jean-François Joly; Jean-Christophe Pothier; Laurent J. Lewis; Normand Mousseau; F. Schiettekatte
Computational Materials Science | 2015
Normand Mousseau; Laurent Karim Béland; Peter Brommer; Fedwa El-Mellouhi; Jean-François Joly; Gawonou Kokou N’Tsouaglo; Oscar A. Restrepo; Mickaël Trochet
Physical Review B | 2013
Jean-François Joly; Laurent Karim Béland; Peter Brommer; Normand Mousseau
Bulletin of the American Physical Society | 2013
Jean-François Joly; Normand Mousseau
Bulletin of the American Physical Society | 2013
Mickaël Trochet; Peter Brommer; Laurent-Karim Beland; Jean-François Joly; Normand Mousseau
Bulletin of the American Physical Society | 2013
Kokou Gawonou N'tsouaglo; Jean-François Joly; Laurent Karim Béland; Peter Brommer; Normand Mousseau