Jean Guillard

Daily migration cycles of fish populations in a tropical estuary (Sine-Saloum, Senegal) using a horizontal-directed split-beam transducer and multibeam sonar

The tropical Sine-Saloum estuary (Senegal) is an ecologically important area for fish population dynamics. Daily cycles of fish movements in a tidal channel were observed using both split-beam and multibeam sonar. A trap-net was set and lifted regularly and simultaneously with the acquisition of acoustic data. The relationship between the two sets of data was satisfactory when acoustic records for single targets were separated from those containing fish schools. The heterogeneity of fish spatial and temporal distributions is examined, as well as the rapidity of changes of fish population density in an environment subject to tides. The consequence of this on sampling strategies is discussed.

Trophic transfer of microcystins through the lake pelagic food web: evidence for the role of zooplankton as a vector in fish contamination.

An in situ study was performed to investigate the role of zooplankton as a vector of microcystins (MCs) from Planktothrix rubescens filaments to fish during a metalimnic bloom of P. rubescens in Lake Hallwil (Switzerland). The concentrations of MCs in P. rubescens and various zooplanktonic taxa (filter-feeders and predators) were assessed in different water strata (epi-, meta- and hypolimnion) using replicated sampling over a 24-hour survey. The presence of P. rubescens in the gut content of various zooplanktonic taxa (Daphnia, Bosmina and Chaoborus) was verified by targeting the cyanobacterial nucleic acids (DNA). These results highlighted that cyanobacterial cells constitute a part of food resource for herbivorous zooplanktonic taxa during metalimnic bloom periods. Furthermore, presence of MCs in Chaoborus larvae highlighted the trophic transfer of MCs between herbivorous zooplankton and their invertebrate predators. Our results suggest that zooplanktonic herbivores by diel vertical migration (DVM) act as vectors of MCs by encapsulating grazed cyanobacteria. As a consequence, they largely contribute to the contamination of zooplanktonic predators, and in fine of zooplanktivorous whitefish. Indeed, we estimated the relative contribution of three preys of the whitefish (i.e. Daphnia, Bosmina and Chaoborus) to diet contamination. We showed that Chaoborus and Daphnia were the highest contributor as MC vectors in the whitefish diet (74.6 and 20.5% of MC-LR equivalent concentrations, respectively). The transfer of MCs across the different trophic compartments follows complex trophic pathways involving various trophic levels whose relative importance in fish contamination might vary at daily and seasonal scale.

Hydroacoustic fish biomass assessment in man-made lakes in Tunisia: horizontal beaming importance and diel effect

We used a Simrad EK60 echosounder equipped with two split-beam transducers to develop a sampling strategy for assessing fish resources in Tunisian man-made lakes. Day and night surveys, using vertical and horizontal beaming, were carried out between December 2006 and February 2007, a period when fish catchability is high. Four reservoirs with differing surface areas and bathymetries were selected. Echogram analysis revealed that fish communities were mainly composed of individual targets. A few schools were detected near the surface during daylight, but these schools dispersed slightly at night. In these multispecies reservoirs, considerable day and night differences in density existed, but with no clear trend. Target strength (TS) distribution mode values detected at night were always lower or equal to daytime values. Biomass estimates were significantly higher during daytime in three reservoirs, corresponding with higher TS modal values. In the other reservoir, the biomass estimate was significantly higher during nighttime corresponding with higher mean density during this period. Using only a vertically aimed transducer in our study reservoirs would have led to an underestimate of density and biomass by 5–100% and 20–100%, respectively, depending on the man-made lake. We conclude that acoustic sampling in our reservoirs must be done during day and night and that both vertical and horizontal beaming must be used to obtain the best possible picture of the fish stocks.

Nodularin and cylindrospermopsin: a review of their effects on fish

Nodularin (NOD) and cylindrospermopsin (CYN) are hepatotoxic cyanotoxins that are present in numerous ecosystems where bloom episodes occur. In this review, the different effects of both of these cyanotoxins on the different ontogenic stages of various fish species were summarised to clarify the state-of-the-art scientific knowledge on this topic. It is clear that fish that are exposed to NOD and CYN were negatively impacted in every studied ontogenic stage. Indeed, these cyanotoxins can accumulate in various organs of fish, leading to deleterious effects on the physiology. This review highlights the fact that all of the previously published studies on the topic have focused only on the short-term effects of a given cyanotoxin on fish. However, during cyanobacterial blooms, fish can be exposed chronically to a variety of toxic compounds with which the fish interact, leading to stronger effects than those observed with a single toxin tested over a short timeframe. Thus, it is essential to conduct additional studies to better understand the actual toxic effects of cyanobacterial blooms on fish populations over medium- and long-term time scales.

First results on migrating shad (Alosa fallax) and mullet (Mugil cephalus) echocounting in a lock on the Rhône River (France) using a split-beam sounder, and relationships with environmental data and fish caught

The application of fisheries acoustics in shallow waters opens new fields of observation and allows new methods for abundance estimates. In this paper we deal with echocounting of migrating fish crossing the Beaucaire-Vallabregues lock, the first obstacle encountered on the Rhone, using a SIMRAD EY500 split-beam sounder, 70 kHz frequency. Two transducers sampled a section of water and evaluated approximately 35% of the lock section, based on a calibration sphere. The number of fish crossing the lock was calculated for each fish lock. Crossing data for the fish were recorded (dates, position, exit time). The present analysis did not allow the identification of the two major species that cross the dam: shad (Alosa fallax) and mullet (Mugil cephalus). The number of fish counted was positively correlated with the catches per unit effort (CPUE) by recreating fishermen below the dam and with increasing water temperature.

Impact of Toxic Cyanobacterial Blooms on Eurasian Perch (Perca fluviatilis): Experimental Study and In Situ Observations in a Peri-Alpine Lake

Due to the importance of young-of-the-year (YOY) perch in the peri-alpine regions where they are consumed, the microcystin (MC) contamination of YOY perch was analysed both in field (Lake Bourget, France) and experimentally using force-feeding protocols with pure MCs. In-situ, schools of YOY perch present in the epilimnion of the lake were never found in direct contact with the P. rubescens blooms that were present in the metalimnion. However, MCs were detected in the muscles and liver of the fish and were thus assumed to reach YOY perch through dietary routes, particularly via the consumption of MC-containing Daphnia. Force-feeding experiment demonstrates the existence of MC detoxification/excretion processes and suggests that in situ, YOY perch could partly detoxify and excrete ingested MCs, thereby limiting the potential negative effects on perch populations under bloom conditions. However, because of chronic exposure these processes could not allow for the complete elimination of MCs. In both experimental and in situ studies, no histological change was observed in YOY perch, indicating that MC concentrations that occurred in Lake Bourget in 2009 were too low to cause histological damage prone to induce mortality. However, Deoxyribonucleic acid (DNA) damages were observed for both the high and low experimental MC doses, suggesting that similar effects could occur in situ and potentially result in perch population disturbance during cyanobacterial blooms. Our results indicate the presence of MCs in wild perch, the consumption of this species coming from Lake Bourget is not contested but more analyses are needed to quantify the risk.

Preliminary results of fish population distribution in a Senegalese coastal area with depths less than 15 m, using acoustic methods

In order to manage the fish stock of the Senegal coastal zone it is necessary to carry out direct assessment surveys by acoustic methods. Acoustic surveys were carried out in this region from a sports-fishing boat, using a split-beam echo sounder in vertical mode, in areas with depth less than 15 m. On a short time scale, spatial structure of the fish population remained stable. The average acoustic biomass detected was variable, but we observed a relative stability of target strength distribution of single fish. The use of acoustic methods in these areas of shallow depths, the consequences of escape behaviour of the fish, and sampling strategies are discussed.

Fishes in Lake Kivu: Diversity and Fisheries

This contribution reviews the knowledge on fish diversity and fisheries in Lake Kivu, with an emphasis on the biology and stock assessment of the introduced Tanganyika sardine, Limnothrissa miodon. Lake Kivu is famous, compared to the other African great lakes, for its poor fish fauna, with 29 species comprising a.o. 15 endemic haplochromines and a few non-native species. In a first part devoted to diversity and biogeography, all species are briefly described, with some details on their biology and ecology in the lake. A second part of this chapter focuses on the non-native Limnothrissa miodon, with a review on its biology, on its past and present abundance, and on available data on the production of the pelagic fishery of this species. The main conclusion is that the fishery yield is relatively low, amounting ∼10,000 t year−1. A recent concern is the arrival of a possible competitor, Lamprichthys tanganicanus, an endemic fish to Lake Tanganyika. Future studies should be conducted on the food web of the littoral zone, where most endemic cichlids are located. More detailed fisheries surveys are also needed, in order to estimate the pressure on the different species.

Seasonal and diel effects on acoustic fish biomass estimates: application to a shallow reservoir with untargeted common carp (Cyprinus carpio)

The aim of the present study was to understand how seasonal fish distributions affect acoustically derived fish biomass estimates in a shallow reservoir in a semi-arid country (Tunisia). To that end, sampling events were performed during four seasons (spring (June), summer (September), autumn (December) and winter (March)) that included day and night surveys. A Simrad EK60 echosounder, equipped with two 120-kHz split-beam transducers for simultaneous horizontal and vertical beaming, was used to sample the entire water column. Surveys during spring and summer and daytime hours of winter were deemed unusable owing to high methane flux from the sediment, and during the day survey of autumn, fish were close to the reservoir bottom leading to low detectability. It follows that acoustic surveys should be conducted only at night during the cold season (December–March) for shallow reservoirs having carp Cyprinus carpio (L.) as the dominant species. Further, night-time biomass estimates during the cold season declined significantly (P<0.001) from autumn to winter. Based on our autumn night-time survey, overall fish biomass in the Bir-Mcherga Reservoir was high (mean (±s.d.) 185±98 tonnes (Mg)), but annual fishery exploitation is low (19.3–24.1Mg) because the fish biomass is likely dominated by invasive carp not targeted by fishers. The results suggest that controlling carp would help improve the fishery.

Comparing hydroacoustic fish stock estimates in the pelagic zone of temperate deep lakes using three sound frequencies (70, 120, 200 kHz)

Abstract Several decades of research have led to the acceptance of hydroacoustics as a reliable measurement method to monitor fish population in lakes, but full standardisation and intercalibration are still lacking. The aim of this study was to investigate the effect of sound frequency on acoustic parameters, such as volume backscattering strength, target strength, and the estimation of fish abundance. Data were recorded in situ using 3 frequencies (70, 120, 200 kHz) simultaneously in 2 different lakes. The results among the frequencies were compared and statistically tested. Data from the 70 and 120 kHz frequencies yielded similar results, but the 200 kHz echosounder estimates in temperate lakes seemed different, especially in cases of high fish abundance, which is typical of eutrophic ecosystems. This work indicates that the abundance estimates of fish populations in temperate lakes based on 200 kHz frequency may differ from results obtained using lower frequencies, and that further study is needed.