Network


Latest external collaboration on country level. Dive into details by clicking on the dots.

Hotspot


Dive into the research topics where Jean-Pierre Gabriel is active.

Publication


Featured researches published by Jean-Pierre Gabriel.


Clinical Neurophysiology | 2003

Conduction velocity of nerve and muscle fiber action potentials after a space mission or a bed rest

Dieter G. Rüegg; Tanja H. Kakebeeke; Jean-Pierre Gabriel; Monica Bennefeld

OBJECTIVE The purpose of the present investigation was to study the readaptation of a human muscle after a prolonged stay in microgravity and after a bed rest of several months. METHODS The surface electromyogram of the soleus muscle was recorded in 6 cosmonauts and 6 bed rest subjects at 5 different torque levels and, in addition, the direct muscle responses (M responses) to supramaximal stimulation of the posterior tibial nerve were also recorded in the bed rest subjects. In a supplementary experiment in normal subjects, M response was recorded with an array of electrodes. RESULTS The median frequency (MF) of the power spectrum of the surface electromyogram was reduced, at all torque levels, immediately after the test period. In the bed rest subjects, the latency of the M response peaks and the inter-peak interval increased during the test period. Recovery to normal occurred within about 10 days. In the normal subjects, the peaks of the M response were conducted along the muscle with a velocity between 21 and 30 m/s. CONCLUSIONS All these results point to a reduction of the conduction velocity in the branching axon terminals and in the muscle fibers during space missions and bed rest.


Biological Cybernetics | 1999

A model for steady isometric muscle activation.

L. M. Studer; Dieter G. Rüegg; Jean-Pierre Gabriel

Abstract. The present model of the motoneuronal (MN) pool – muscle complex (MNPMC) is deterministic and designed for steady isometric muscle activation. Time-dependent quantities are treated as time-averages. The character of the model is continuous in the sense that the motor unit (MU) population is described by a continuous density function. In contrast to most already published models, the wiring (synaptic weight) between the input fibers to the MNPMC and the MNs (about which no detailed data are known) is deduced, whereas the input–force relation is given. As suggested by experimental data, this relation is assumed to be linear during MU recruitment, but the model allows other, nonlinear relations. The input to the MN pool is defined as the number of action potentials per second in all input fibers, and the excitatory postsynaptic potential (EPSP) conductance in MNs evoked by the input is assumed to be proportional to the input. A single compartment model with a homogeneous membrane is used for a MN. The MNs start firing after passing a constant voltage threshold. The synaptic current–frequency relation is described by a linear function and the frequency–force transformation of a MU by an exponential function. The sum of the MU contraction forces is the muscle force, and the activation of the MUs obeys the size principle. The model parameters were determined a priori, i.e., the model was not used for their estimation. The analysis of the model reveals special features of the activation curve which we define as the relation between the input normalized by the threshold input of the MN pool and the force normalized by the maximal muscle force. This curve for any muscle turned out to be completely determined by the activation factor, the slope of the linear part of the activation curve (during MU recruitment). This factor determines quantitatively the relation between MU recruitment and rate modulation. This property of the model (the only known model with this property) allows a quantification of the recruitment gain (Kernell and Hultborn 1990). The interest of the activation factor is illustrated using two human muscles, namely the first dorsal interosseus muscle, a small muscle with a relatively small force at the end of recruitment, and the medial gastrocnemius muscle, a strong muscle with a relatively large force at the end of recruitment. It is concluded that the present model allows us to reproduce the main features of muscle activation in the steady state. Its analytical character facilitates a deeper understanding of these features.


Biological Cybernetics | 2002

Computer simulation of the motoneuron pool-muscle complex. I. Input system and motoneuron pool

R. M. Nussbaumer; Dieter G. Rüegg; L. M. Studer; Jean-Pierre Gabriel

Abstract. The aim of the present study was to simulate the input system and the motoneuron (MN) pool of the MN pool–muscle complex (MNPMC). Input fibers, which can originate from command centers in the central nervous system or from sensory organs, activate the MN pool. They generate sequences of action potentials, the frequency of which is proportional to a time-dependent activation factor (which is an input to the model). Different connection patterns between the input fibers and motor units (MUs) are allowed. For simplicity and since no precise experimental data are available, 70 input fibers and 4 boutons per fiber and MN are simulated (this corresponds approximately to the monosynaptic group-Ia input of the cat medial gastrocnemius muscle). Each bouton generates the same conductance change in the postsynaptic membrane. The MNs are modeled with a single compartment and a homogenous membrane. According to experimental data, the membrane leakage conductance and capacitance are MU dependent. Since the precise relation is unknown: (a) the computed relation between MU contraction force and the MN leakage conductance was taken from a steady-state MNPMC model, and (b) the capacitance was assumed to be proportional to the leakage conductance. The MN membrane includes time- and voltage-dependent ionic channels (fast and slow K+ and low- and high-threshold Ca2+ channels). The density and time constant of the slow K+ channels and the density of the Ca2+ channels were fitted to approximate afterhyperpolarization characteristics and frequency-injected current relations of type-identified cat MNs. If the membrane reaches a voltage threshold the MNs generate action potentials, which were simulated by voltage pulses. The activation of the MN pool of the human first dorsal interosseus muscle was simulated with injected and synaptic currents in order to illustrate the size principle, synaptic noise, and other features of muscle activation. It is concluded that the present model reproduces the main properties of the input–output relations of different MN types within a muscle. Together with the simulation of the muscle force and the surface EMG, which will be published in subsequent papers, it will be a powerful tool for reproducing experiments on the motor system and investigating functional mechanisms of motor control.


PLOS ONE | 2015

Mathematical Modeling of the Dynamics of Shoot-Root Interactions and Resource Partitioning in Plant Growth

Chrystel Feller; Patrick Favre; Ales Janka; Samuel C. Zeeman; Jean-Pierre Gabriel; Didier Reinhardt

Plants are highly plastic in their potential to adapt to changing environmental conditions. For example, they can selectively promote the relative growth of the root and the shoot in response to limiting supply of mineral nutrients and light, respectively, a phenomenon that is referred to as balanced growth or functional equilibrium. To gain insight into the regulatory network that controls this phenomenon, we took a systems biology approach that combines experimental work with mathematical modeling. We developed a mathematical model representing the activities of the root (nutrient and water uptake) and the shoot (photosynthesis), and their interactions through the exchange of the substrates sugar and phosphate (Pi). The model has been calibrated and validated with two independent experimental data sets obtained with Petunia hybrida. It involves a realistic environment with a day-and-night cycle, which necessitated the introduction of a transitory carbohydrate storage pool and an endogenous clock for coordination of metabolism with the environment. Our main goal was to grasp the dynamic adaptation of shoot:root ratio as a result of changes in light and Pi supply. The results of our study are in agreement with balanced growth hypothesis, suggesting that plants maintain a functional equilibrium between shoot and root activity based on differential growth of these two compartments. Furthermore, our results indicate that resource partitioning can be understood as the emergent property of many local physiological processes in the shoot and the root without explicit partitioning functions. Based on its encouraging predictive power, the model will be further developed as a tool to analyze resource partitioning in shoot and root crops.


Bioinformatics | 2007

Steady-state expression of self-regulated genes

Thomas Fournier; Jean-Pierre Gabriel; Christian Mazza; Jérôme Pasquier; José Luis Galbete; Nicolas Mermod

MOTIVATION Regulatory gene networks contain generic modules such as feedback loops that are essential for the regulation of many biological functions. The study of the stochastic mechanisms of gene regulation is instrumental for the understanding of how cells maintain their expression at levels commensurate with their biological role, as well as to engineer gene expression switches of appropriate behavior. The lack of precise knowledge on the steady-state distribution of gene expression requires the use of Gillespie algorithms and Monte-Carlo approximations. METHODOLOGY In this study, we provide new exact formulas and efficient numerical algorithms for computing/modeling the steady-state of a class of self-regulated genes, and we use it to model/compute the stochastic expression of a gene of interest in an engineered network introduced in mammalian cells. The behavior of the genetic network is then analyzed experimentally in living cells. RESULTS Stochastic models often reveal counter-intuitive experimental behaviors, and we find that this genetic architecture displays a unimodal behavior in mammalian cells, which was unexpected given its known bimodal response in unicellular organisms. We provide a molecular rationale for this behavior, and we implement it in the mathematical picture to explain the experimental results obtained from this network.


Journal of Mathematical Biology | 2014

Pattern formation in auxin flux

Chrystel Feller; Jean-Pierre Gabriel; Christian Mazza; Florence Yerly

The plant hormone auxin is fundamental for plant growth, and its spatial distribution in plant tissues is critical for plant morphogenesis. We consider a leading model of the polar auxin flux, and study in full detail the stability of the possible equilibrium configurations. We show that the critical states of the auxin transport process are composed of basic building blocks, which are isolated in a background of auxin depleted cells, and are not geometrically regular in general. The same model was considered recently through a continuous limit and a coupling to the von Karman equations, to model the interplay of biochemistry and mechanics during plant growth. Our conclusions might be of interest in this setting, since, for example, we establish the existence of Lyapunov functions for the auxin flux, proving in this way the convergence of pure transport processes toward the set of equilibrium points.


Archive | 1993

Activation and Contraction of a Muscle

Dieter G. Rüegg; L. M. Studer; Jean-Pierre Gabriel

A parametric model of a pool of motor units (MU) of a skelettal muscle is developed. The model is based on the following assumptions: (1) The size principle is respected, (2) only steady state conditions and no time dependency are considered, (3) the motoneuronal membrane is homogeneous. An equation could then be developed for the relation between the input and the EPSP current in a motoneuron. In line with experimental data, the discharge frequency of model MUs is linearly related to the EPSP current, an equation with an exponential term describes how the MU contraction force depends on the discharge frequency, and the sum of the MU contraction forces gives the whole muscle force. Incorporating into the model the experimental finding that, over part of the working range, there is a linear input-output relation of the pool, all the parameters of the model are determined. The model predicts motoneuronal pool properties which can be tested experimentally.


Archive | 1990

Worm’s sexuality and special function theory

Jean-Pierre Gabriel; Herman Hanisch; Warren M. Hirsch

The work described here concerns some mathematical questions related to parasitology. It has its roots in a paper by Macdonald (1965) on helminthic infections where the author stresses the importance of the parasite’s sexuality in its transmission dynamics. Anyone who wants to capture quantitatively the life-cycle of a parasite has to deal, at some point, with its reproductive strategy. More precisely, it is impossible to avoid computation of the number of fertilized eggs if one wants to get an estimate of the parasite’s progeny. Assuming homogeneity, in the case of helminthic infections the quantity of interest will be proportional to the number of ovipositing worms.


Siam Journal on Applied Mathematics | 2008

A MATHEMATICAL MODEL FOR THE STEADY ACTIVATION OF A SKELETAL MUSCLE

Jean-Pierre Gabriel; L. M. Studer; Dieter G. Rüegg; M.-A. Schnetzer

A skeletal muscle is composed of motor units, each consisting of a motoneuron and the muscle fibers it innervates. The input to the motor units is formed of electrical signals coming from higher motor centers and propagated to the motoneurons along a network of nerve fibers. Because of its complexity, this network still escapes actual direct observations. The present model describes the steady state activation of a muscle, i.e., of its motor units. It incorporates the network as an unknown quantity and, given the latter, predicts the input-force relation (activation curve) of the muscle. Conversely, given a suitable activation curve, our model enables the recovery of the network. This step is performed by using experimental data about the activation curve, and the whole activation process of a muscle can then be theoretically investigated. In this way, this approach provides a link between the macroscopic (activation curve) and microscopic (network) levels. From a mathematical viewpoint, solving the prece...


Nature | 2004

Phylogenetic constraints and adaptation explain food-web structure

Marie-France Cattin; Louis-Félix Bersier; Carolin Banašek-Richter; Richard Baltensperger; Jean-Pierre Gabriel

Collaboration


Dive into the Jean-Pierre Gabriel's collaboration.

Top Co-Authors

Avatar
Top Co-Authors

Avatar
Top Co-Authors

Avatar
Top Co-Authors

Avatar
Top Co-Authors

Avatar
Top Co-Authors

Avatar
Top Co-Authors

Avatar
Top Co-Authors

Avatar
Top Co-Authors

Avatar
Top Co-Authors

Avatar
Researchain Logo
Decentralizing Knowledge