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Dive into the research topics where Jeffery J. Prusakiewicz is active.

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Featured researches published by Jeffery J. Prusakiewicz.


Current Pharmaceutical Design | 2004

Oxidative Metabolism of Endocannabinoids by COX-2

Kevin R. Kozak; Jeffery J. Prusakiewicz; Lawrence J. Marnett

The last decade has witnessed a rapid expansion in our understanding of the mammalian endogenous cannabinoid system. In just a few short years since the discovery of endogenous lipids that serve as cannabinoids in vivo, these molecules have been shown to participate in a broad array of physiological and pathological processes. Consequently, attention has been directed at defining the proteins responsible for endocannabinoid synthesis, transport, and metabolism. Recently, multiple fatty acid oxygenases including, most notably, cyclooxygenase-2 (COX-2), have been implicated in endocannabinoid metabolism. This review will highlight connections between COX-2 and the endogenous cannabinoid system. The available biochemical evidence supporting a role for COX-2 in endocannabinoid metabolism will be presented. Finally, the potential biological consequences of COX-2-mediated endocannabinoid oxygenation will be discussed.


Nature Chemical Biology | 2011

(R)-Profens are substrate-selective inhibitors of endocannabinoid oxygenation by COX-2

Kelsey C. Duggan; Daniel J. Hermanson; Joel Musee; Jeffery J. Prusakiewicz; Jami L. Scheib; Bruce D. Carter; Surajit Banerjee; John A. Oates; Lawrence J. Marnett

Scientific publishing developed as a way to communicate scientific discoveries to peers. By first simply collecting and later evaluating contributions, scientists were able to avoid duplicating the efforts of others and instead build directly on prior results. In the modern era, all journals make use of this same basic framework, but the ways in which papers are evaluated and the models of how papers are published vary widely. As each system has advantages and disadvantages, new models continue to arise to address real or perceived limitations of existing approaches. Within this context, we submit that journals coordinated by professional editors offer unique and important advantages to the scientific community. A professional editor acts as an in-house expert in and advocate for specific fields or subfields within the overall scientific scope of their journal. To improve their knowledge of ongoing efforts and challenges in their fields, and to promote communication within and across fields, editors attend conferences in their topic areas, engage with members of the community and commission reviews or other highlights of important work. Editors also take primary responsibility for submitted manuscripts in their fields, communicating with authors at all steps from an initial editorial decision through subsequent decisions on reviewed manuscripts and final acceptance through to publication of the paper. The initial assessment of a manuscript requires a careful evaluation of its merits in regards to the field as a whole, and occupies a significant proportion of an editor’s time. Whereas academic editors may consider a paper based on more first-hand knowledge of a specific subfield or experimental technique, professional editors are able to draw from a different set of information in making their decisions. For example, though professional editors are PhD-level scientists (usually with postdoctoral research experience or beyond) and thus have an appropriate scientific framework to understand and think critically about a manuscript’s contents, their position outside of a particular subfield affords a broader scientific perspective from which to evaluate the importance of any one result. This external but engaged view also permits a level of editorial independence that decouples an author’s track record or influence from the decision process. Additionally, because professional editors see a wide range of referee feedback and actively seek community guidance for establishing standards in a given field, they are well placed to recognize the type of discoveries likely to find support from external experts and the lines of evidence needed to support particular claims. By pursuing only those manuscripts that potentially offer unprecedented insights and contain appropriate experimental support, editors can provide timely feedback to the large majority of authors whose manuscripts are returned to them without review and focus their attention on manuscripts likely to be of greatest interest to the journal’s readership. Although we are sympathetic to authors’ frustrations that only a minority of papers are sent for peer review, we are perplexed by the occasional criticism that professional editors are unsuited to evaluate manuscripts. Indeed, ‘triaging’ papers is something that scientists do on a daily basis in selecting which articles in the literature they will read in full, in part or not at all. With the increasing volume of publications, even the use of Internet search engines and associated keyword-based alerts highlight more potentially relevant papers than can realistically be read by a single scientist. Professional editors thus effectively prescreen papers by acting not only as scientists but also as advocates of the scientific readership, considering papers in several dimensions in an effort to ensure that all papers published in the journal will be required reading for the field. How do we ‘screen’ papers? Contrary to suggestions that professional editors are indecisive and act merely as managers (Nature 472, 391, 2011), editors can only be effective if they form thoughtful opinions and act accordingly. Beyond the initial evaluation, in which editors must be able to enumerate the strengths of a particular manuscript, editors take an active role in managing the peer review process. As with academic editors, professional editors rely on referees to evaluate the technical merits of a manuscript, weigh in on whether the experimental evidence supports the major conclusions of a study and provide advice as to whether the findings are sufficient to merit publication in the journal (Nat. Chem. Biol. 6, 245, 2010). However, a paper for which all three referees provide consistent advice that points to a clear decision is the exception, not the rule, particularly in interdisciplinary fields. As such, professional editors do not simply hand referee reports back to authors: editors consider referee feedback, provide guidance for revisions and moderate technical disagreements that arise (Nat. Chem. Biol. 4, 715, 2008; Nat. Chem. Biol. 7, 1, 2011). In addition, much like a grant review panel that can only fund a subset of high-quality proposals, editors weigh referee enthusiasm for any one manuscript against the comments for others to strategically select representative papers from across the fields they cover and publish only the most compelling manuscripts. We agree that no publication model is perfect. However, we submit that professional editors’ pursuit of a single objective—to find and publish the best scientific papers— provides a strong correlation with the success of a particular journal according to almost any measure. This is in part a result of the additional support provided to authors that adds value to and raises the profile of their manuscripts, including artistic support, copyediting, technical proofreading and press coverage. Streamlining the number of editors making decisions to a few fulltime professionals who work as a team also promotes consistency and fairness as well as the ability to alter editorial criteria as standards evolve or paradigm-changing discoveries are made. We further posit that wider adoption of this model would decrease the prevalence of ‘least publishable units’, which are causing strain on authors, referees and funding agencies (Nature 463, 1009, 2010; Nat. Chem. Biol. 6, 307, 2010). At Nature Chemical Biology, we continually challenge ourselves to keep connected with current research and be mindful of the evolution of the fields we cover. We strive to make our decisions timely and transparent for authors so that, even if they are unsuccessful with one submission, the insight they gain into our processes could benefit future submissions. Finally, we are aware that publishing models continually evolve (Nat. Chem. Biol. 2, 391, 2006), and we seek opportunities for improving the publishing process through the open dialogue we consistently pursue with our authors, referees and readers. ◾ Professional editors provide the perspective, consistency and responsiveness needed to identify and communicate groundbreaking scientific advances. Our professional opinion


Biochemistry | 2009

Differential Sensitivity and Mechanism of Inhibition of COX-2 Oxygenation of Arachidonic Acid and 2-Arachidonoylglycerol by Ibuprofen and Mefenamic Acid

Jeffery J. Prusakiewicz; Kelsey C. Duggan; Carol A. Rouzer; Lawrence J. Marnett

Ibuprofen and mefenamic acid are weak, competitive inhibitors of cyclooxygenase-2 (COX-2) oxygenation of arachidonic acid (AA) but potent, noncompetitive inhibitors of 2-arachidonoylglycerol (2-AG) oxygenation. The slow, tight-binding inhibitor, indomethacin, is a potent inhibitor of 2-AG and AA oxygenation whereas the rapidly reversible inhibitor, 2′-des-methylindomethacin, is a potent inhibitor of 2-AG oxygenation but a poor inhibitor of AA oxygenation. These observations are consistent with a model in which inhibitors bind in one subunit of COX-2 and inhibit 2-AG binding in the other subunit of the homodimeric protein. In contrast, ibuprofen and mefenamate must bind in both subunits to inhibit AA binding.


Biochemical and Biophysical Research Communications | 2002

Selective oxygenation of N-arachidonylglycine by cyclooxygenase-2

Jeffery J. Prusakiewicz; Philip J. Kingsley; Kevin R. Kozak; Lawrence J. Marnett

Nonsteroidal anti-inflammatory drugs prevent hyperalgesia and inflammation by inhibiting the cyclooxygenase-2 (COX-2) catalyzed oxygenation of arachidonic acid to prostaglandin (PG) H(2). The lipoamino acid N-arachidonylglycine (NAGly) has also been shown to suppress tonic inflammatory pain and is naturally present at significant levels in many of the same mammalian tissues that express COX-2. Here, we report that COX-2 selectively metabolizes NAGly to PGH(2) glycine (PGH(2)-Gly) and hydroxyeicosatetraenoic glycine (HETE-Gly). Site-directed mutagenesis experiments identify the side pocket residues of COX-2, especially Arg-513, as critical determinants of the COX-2 selectivity towards NAGly. This is the first report of a charged arachidonyl derivative that is a selective substrate for COX-2. These results suggest a possible role for COX-2 in the regulation of NAGly levels and the formation of a novel class of eicosanoids from NAGly metabolism.


Bioorganic & Medicinal Chemistry Letters | 2002

Enantiospecific, selective cyclooxygenase-2 inhibitors.

Kevin R. Kozak; Jeffery J. Prusakiewicz; Scott W. Rowlinson; Lawrence J. Marnett

Cyclooxygenase inhibition studies with novel indomethacin alkanolamides demonstrate the potential for dramatic differences in inhibitor properties conferred by subtle structural modifications. The transformation of non-selective alpha-(S)-substituted indomethacin ethanolamides to potent, COX-2 selective inhibitors by simple stereocenter inversion highlights this property.


Biochemistry | 2016

Conservative Secondary Shell Substitution In Cyclooxygenase-2 Reduces Inhibition by Indomethacin Amides and Esters via Altered Enzyme Dynamics.

Mary E. Konkle; Anna L. Blobaum; Christopher W. Moth; Jeffery J. Prusakiewicz; Shu Xu; Kebreab Ghebreselasie; Dapo Akingbade; Aaron T. Jacobs; Carol A. Rouzer; Terry P. Lybrand; Lawrence J. Marnett

The cyclooxygenase enzymes (COX-1 and COX-2) are the therapeutic targets of nonsteroidal anti-inflammatory drugs (NSAIDs). Neutralization of the carboxylic acid moiety of the NSAID indomethacin to an ester or amide functionality confers COX-2 selectivity, but the molecular basis for this selectivity has not been completely revealed through mutagenesis studies and/or X-ray crystallographic attempts. We expressed and assayed a number of divergent secondary shell COX-2 active site mutants and found that a COX-2 to COX-1 change at position 472 (Leu in COX-2, Met in COX-1) reduced the potency of enzyme inhibition by a series of COX-2-selective indomethacin amides and esters. In contrast, the potencies of indomethacin, arylacetic acid, propionic acid, and COX-2-selective diarylheterocycle inhibitors were either unaffected or only mildly affected by this mutation. Molecular dynamics simulations revealed identical equilibrium enzyme structures around residue 472; however, calculations indicated that the L472M mutation impacted local low-frequency dynamical COX constriction site motions by stabilizing the active site entrance and slowing constriction site dynamics. Kinetic analysis of inhibitor binding is consistent with the computational findings.


Journal of Biological Chemistry | 2003

A Novel Mechanism of Cyclooxygenase-2 Inhibition Involving Interactions with Ser-530 and Tyr-385.

Scott W. Rowlinson; James R. Kiefer; Jeffery J. Prusakiewicz; Jennifer L. Pawlitz; Kevin R. Kozak; Amit S. Kalgutkar; William C. Stallings; Ravi G. Kurumbail; Lawrence J. Marnett


Journal of Biological Chemistry | 2003

Peroxisome Proliferator-activated Receptor γ-mediated Differentiation A MUTATION IN COLON CANCER CELLS REVEALS DIVERGENT AND CELL TYPE-SPECIFIC MECHANISMS

Rajnish A. Gupta; Pasha Sarraf; Elisabetta Mueller; Jeffrey A. Brockman; Jeffery J. Prusakiewicz; Charis Eng; Timothy M. Willson; Raymond N. DuBois


Journal of Biological Chemistry | 2002

Control of prostaglandin stereochemistry at the 15-carbon by cyclooxygenases-1 and -2. A critical role for serine 530 and valine 349.

Claus Schneider; William E. Boeglin; Jeffery J. Prusakiewicz; Scott W. Rowlinson; Lawrence J. Marnett; Nigulas Samel; Alan R. Brash


Journal of Biological Chemistry | 2001

Amino acid determinants in cyclooxygenase-2 oxygenation of the endocannabinoid 2-arachidonylglycerol.

Kevin R. Kozak; Jeffery J. Prusakiewicz; Scott W. Rowlinson; Claus Schneider; Lawrence J. Marnett

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Chuan Ji

Vanderbilt University

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