Jens Rehanek

Methods development for diffraction and spectroscopy studies of metalloenzymes at X-ray free-electron lasers.

X-ray free-electron lasers (XFELs) open up new possibilities for X-ray crystallographic and spectroscopic studies of radiation-sensitive biological samples under close to physiological conditions. To facilitate these new X-ray sources, tailored experimental methods and data-processing protocols have to be developed. The highly radiation-sensitive photosystem II (PSII) protein complex is a prime target for XFEL experiments aiming to study the mechanism of light-induced water oxidation taking place at a Mn cluster in this complex. We developed a set of tools for the study of PSII at XFELs, including a new liquid jet based on electrofocusing, an energy dispersive von Hamos X-ray emission spectrometer for the hard X-ray range and a high-throughput soft X-ray spectrometer based on a reflection zone plate. While our immediate focus is on PSII, the methods we describe here are applicable to a wide range of metalloenzymes. These experimental developments were complemented by a new software suite, cctbx.xfel. This software suite allows for near-real-time monitoring of the experimental parameters and detector signals and the detailed analysis of the diffraction and spectroscopy data collected by us at the Linac Coherent Light Source, taking into account the specific characteristics of data measured at an XFEL.

X-ray absorption spectroscopy using a self-seeded soft X-ray free-electron laser

X-ray free electron lasers (XFELs) enable unprecedented new ways to study the electronic structure and dynamics of transition metal systems. L-edge absorption spectroscopy is a powerful technique for such studies and the feasibility of this method at XFELs for solutions and solids has been demonstrated. However, the required x-ray bandwidth is an order of magnitude narrower than that of self-amplified spontaneous emission (SASE), and additional monochromatization is needed. Here we compare L-edge x-ray absorption spectroscopy (XAS) of a prototypical transition metal system based on monochromatizing the SASE radiation of the linac coherent light source (LCLS) with a new technique based on self-seeding of LCLS. We demonstrate how L-edge XAS can be performed using the self-seeding scheme without the need of an additional beam line monochromator. We show how the spectral shape and pulse energy depend on the undulator setup and how this affects the x-ray spectroscopy measurements.

Design and optimization of a parallel spectrometer for ultra-fast X-ray science.

In the present work, different varied line space (VLS) and reflection zone plate (RZP) gratings are analyzed for their suitability in low-signal femtosecond soft X-ray spectroscopy. The need for high efficiency suggests a straightened focal line whose sharpness and residual curvature will determine the quality. One- and two-dimensional VLS structures feature an attractive trade-off between a sufficient optical performance and a strongly relaxed fabrication, due to moderate line densities which are easily accessible by e-beam lithography. Based on fanned-out RZP arrays, their continuous limit version is identified to generate an almost perfect focal line however, with an aberration level three orders of magnitude better than for the VLS gratings and well below the diffraction limit over large acceptance angles.

Simulations of diagnostic spectrometers for the European XFEL using the ray-trace tool RAY

This paper presents the outcome of ray tracing simulations for different optical schemes to be setup at the European X-ray Free Electron Laser facility (XFEL.EU), Germany: one- or two- channel (cut) crystal X-ray monochromators (K-Mono; using spontaneous radiation) are planned and designed mainly for photon beam based alignment, which is gap tuning of the undulator segments and phase tuning of the phase shifters during commissioning and maintenance of the undulators. The coherent SASE (Self Amplified Spontaneous Emission) radiation will be monitored pulse-resolved by single-shot spectrometers of which two types are investigated: i) a three element spectrometer, design proposed by Yabashi et al., which consists of a curved focusing mirror, followed by a flat analyzer crystal and a 2D-detector.ii) a two element spectrometer based on a reflection zone plate that reflects and focuses in one step, and a 2D-detector (currently under development).

Soft x-ray absorption spectroscopy of metalloproteins and high-valent metal-complexes at room temperature using free-electron lasers

X-ray absorption spectroscopy at the L-edge of 3d transition metals provides unique information on the local metal charge and spin states by directly probing 3d-derived molecular orbitals through 2p-3d transitions. However, this soft x-ray technique has been rarely used at synchrotron facilities for mechanistic studies of metalloenzymes due to the difficulties of x-ray-induced sample damage and strong background signals from light elements that can dominate the low metal signal. Here, we combine femtosecond soft x-ray pulses from a free-electron laser with a novel x-ray fluorescence-yield spectrometer to overcome these difficulties. We present L-edge absorption spectra of inorganic high-valent Mn complexes (Mn ∼ 6–15 mmol/l) with no visible effects of radiation damage. We also present the first L-edge absorption spectra of the oxygen evolving complex (Mn4CaO5) in Photosystem II (Mn < 1 mmol/l) at room temperature, measured under similar conditions. Our approach opens new ways to study metalloenzymes under functional conditions.

Transmission zone plates as analyzers for efficient parallel 2D RIXS-mapping

We have implemented and successfully tested an off-axis transmission Fresnel zone plate as spectral analyzer for resonant inelastic X-ray scattering (RIXS). The imaging capabilities of zone plates allow for advanced two-dimensional (2D) mapping applications. By varying the photon energy along a line focus on the sample, we were able to simultaneously record the emission spectra over a range of excitation energies. Moreover, by scanning a line focus across the sample in one dimension, we efficiently recorded RIXS spectra spatially resolved in 2D, increasing the throughput by two orders of magnitude. The presented scheme opens up a variety of novel measurements and efficient, ultra-fast time resolved investigations at X-ray Free-Electron Laser sources.

Reflection zone plate concept for resonant inelastic x-ray scattering spectrometry

We simulate a proof-of-principle design of a wavelength dispersive, parallel spectrometer for use in resonant inelastic x-ray scattering (RIXS). The instrument relies on a multiple-channel reflection zone plate (RZP) array, enabling the recording of fluorescence spectra from an acceptance angle of 18  arc min×19  arc min with a mainly source-size-limited resolving power of (0.2-2.6)×104 over an energy range of 21 eV at the L-edge of Fe around 715 eV. An optimal two-dimensional signal readout preserves the spectral resolution to a large extent for widely open exit apertures of ≳50  mm2. The geometrical parameters are matched to the PEAXIS end station at the BESSY II synchrotron facility, and relaxed RZP line densities of <9×102  mm-1 assure the technical feasibility. An error budget estimation with respect to fabrication and alignment tolerances provides the link to real, RZP-based RIXS experiments in the future.

Initial Evaluation of the European XFEL Undulator Commissioning Spectrometer with a Single Channel-Cut Crystal

At the European X-ray Free Electron Laser facility one‐ or two‐ Si(111) channel (cut) crystal X‐ray monochromator (Kmonochromator) are planned for photon beam based alignment: gap tuning of the undulator segments and phase tuning of the phase shifters during commissioning and maintenance of the undulators. A prototype device has been built using a single channel-cut crystal and was characterized at PETRAIII synchrotron (at P01, which is the only beamline with two undulator segments) by applying different undulator adjustment methods, intended for the European XFEL, that use imaging and intensity detection. This paper presents the setup and the first results from the experimental qualification of the K-monochromator prototype.

A compact and versatile tender X-ray single-shot spectrometer for online XFEL diagnostics

A single-shot spectrometer for the tender X-ray range is presented, based on the von Hamos geometry and using elastic scattering as a fingerprint of the XFEL-produced spectrum.

Highly efficient soft X-ray spectrometer based on a reflection zone plate for resonant inelastic X-ray scattering measurements

We present a newly designed compact and flexible soft X-ray spectrometer for resonant inelastic X-ray scattering (RIXS) studies within an energy range from 380 eV to 410 eV, which would include the K alpha emission lines of vital elements like nitrogen. We utilized an off-axis reflection zone plate (RZP) as the wavelength selective element with a maximum line density of 10000 l/mm. A higher energy resolution over a broader range of ± 15 eV around the designed energy was achieved by displacing the RZP. Additionally, for the first time, an actual optical side effect, the so-called comatic aberration was exploited to increase the energy resolution. First results show a resolving power in the order of 1300 for photon energy of 395 eV, which is comparable to a commercial varied line spacing grating (VLS).