Jerald S. Ault

A biogeographic analysis and review of the far eastern Pacific coral reef region

Abstract New information on the presence and relative abundances of 41 reef-building (zooxanthellate) coral species at 11 eastern Pacific and 3 central Pacific localities is examined in a biogeographic analysis and review of the eastern Pacific coral reef region. The composition and origin of the coral fauna and other reef-associated taxa are assessed in the context of dispersal and vicariance hypotheses. A minimum variance cluster analysis using coral species presence–absence classification data at the 14 localities revealed three eastern Pacific reef-coral provinces: (1) equatorial– mainland Ecuador to Costa Rica, including the Galápagos and Cocos Islands; (2) northern– mainland México and the Revillagigedo Islands; (3) island group– eastern Pacific Malpelo Island and Clipperton Atoll, and central Pacific Hawaiian, Johnston and Fanning Islands. Coral species richness is relatively high in the equatorial (17–26 species per locality) and northern (18–24 species) provinces, and low at two small offshore island localities (7–10 species). A high proportion (36.6%, 15 species) of eastern Pacific coral species occurs at only one or two localities; of these, three disappeared following the 1982–83 ENSO event, three occur as death assemblages at several localities, and five are endangered with known populations of ten or fewer colonies. Principal component analysis using ordinal relative density data for the 41 species at the 14 localities indicated three main species groupings, i.e., those with high, mid, and narrow spatial distributions. These groupings correlated with species population-dynamic characteristics. These results were compared with data for riverine discharges, ocean circulation patterns, shoreline habitat characteristics, and regional sea surface temperature data to help clarify the analyses as these measures of environmental variability affect coral community composition. Local richness was highest at localities with the highest environmental variability. Recent information regarding the strong affinity between eastern and central Pacific coral faunas, abundance of teleplanic larvae in oceanic currents, high genetic similarity of numerous reef-associated species, and appearances of numerous Indo-west Pacific species in the east Pacific following ENSO activity, suggest the bridging of the east Pacific filter bridge (formerly east Pacific barrier).

Behavioral Assumptions in Models of Fish Movement and Their Influence on Population Dynamics

Abstract This study investigates the movement and growth of cohorts in a coastal fish stock by simulating animal responses to spatial heterogeneity of biotic and abiotic conditions in a dynamic marine landscape. A coastal bay is modeled using spatial and temporal data on prey distribution, benthic habitat, depth, and salinity. Prey abundance and salinity vary daily through an annual cycle to create a spatiotemporally dynamic environment with seasonal fluctuations in the quality and distribution of habitats favoring growth. Three movement behaviors—random walk, kinesis, and gradient response via restricted-area search—simulate fish cohort movements in relation to environmental characteristics. A bioenergetic growth model is used to describe somatic growth by comparing spatiotemporally variable prey consumption rates and metabolic requirements. This facilitates evaluation of the way in which movement behavior influences the ability of cohorts to locate and occupy favorable habitats in a heterogeneous enviro...

Analysis of Two Length-Based Mortality Models Applied to Bounded Catch Length Frequencies

Abstract We performed an assessment of the length-based total mortality model of Beverton and Holt, assuming that catch length-frequency distributions in tropical artisanal fisheries are constrained by (1) the selective properties of multiple gears used and (2) the spatiotemporal availabilities of certain size classes of fish to operationally restricted fleets. Positive bias always resulted with the Beverton and Holt estimator of Z (total mortality); this estimator assumes an infinite exploitable life span. Estimates of Z were unreasonably biased when exploitable life spans were 50% or less of the biological life span of the species considered in the analyses. Biases were larger at lower levels of fishing mortality rates. We developed a new method from a truncated equation for average fish length. It considers length at first capture and the maximum retainable length actually observed in the fishery catch. The method has no explicit solution for Z, so we used numerical methods to provide its solution. The...

Length-based assessment of sustainability benchmarks for coral reef fishes in Puerto Rico

SUMMARY The sustainability of multispecies coral reef fisheries is a key conservation concern given their economic and ecological importance. Empirical estimation and numerical model analyses were conducted to evaluate exploitation status via resource reference points (or sustainability benchmarks) for coral reef fishes of the snapper-grouper complex in Puerto Rico. Mean size (¯ L, in length) of animals in the exploited part of the population was estimated from fishery-dependent and fishery-independent size composition data and used as an indicator variable of exploitation rates. In application, fishing mortality rates estimated from ¯ L of various data sources were comparable. Of the 25 reef fish species assessed, 16 were below 30% spawning potential ratio (SPR), six were above 30% SPR, and three could not be reliably determined owing to low sample sizes. These findings indicate that a majority ofsnapper-grouperspeciesinPuertoRicoarecurrently fished at unsustainable levels.

An Efficient Sampling Survey Design to Estimate Pink Shrimp Population Abundance in Biscayne Bay, Florida

Abstract We developed an efficient sampling design-based approach using fishery-independent surveys to estimate population abundance of pink shrimp Penaeus duorarum over time in Biscayne Bay, Florida. We initially implemented quarterly stratified random sampling (StRS) using nine habitat strata and determined that average pink shrimp density (numbers/m2) was highest in late fall and lowest in spring and late summer. Coefficient of variation of the quarterly surveys, expressed as percent standard error/mean density, ranged from 5.8% to 14.3%. We found StRS to be more efficient (i.e., with lower variance) than simple random sampling (SRS) in most seasons. Statistical analyses suggested that pink shrimp densities were dependent on the biophysical habitat variables of bottom substrate, depth, and salinity. We also noted ontogenetic shifts in these relationships that were particularly pronounced at the onset of sexual maturation. Poststratification analysis was used to further evaluate several alternative habi...

Benthic Habitat Mapping in the Tortugas Region, Florida

Concern about declining trends in coral reef habitats and reef fish stocks in the Florida Keys contributed to the implementation of a network of no-take marine protected areas in 1997. In support of the efforts of the Dry Tortugas National Park and Florida Keys National Marine Sanctuary to implement additional no-take areas in the Tortugas region in 2001, we expanded the scale of our fisheries independent monitoring program for coral reef fishes in the region. To provide a foundation for the habitat-based, stratified random sampling design of the program, we created a digital benthic habitat map of coral reef and hard-bottom habitats in a geographic information system by synthesizing data from bathymetric surveys, side-scan sonar imagery, aerial photogrammetry, existing habitat maps, and in situ visual surveys. Existing habitat maps prior to 1999 were limited to shallow-water (< 20 m depth) soft-sediment, coral reef, and hard-bottom habitats within Dry Tortugas National Park and did not include deeper areas such as the Tortugas Bank, now partially contained within no-take marine protected area boundaries. From diver observations made during the 1999 survey, we developed a classification scheme based on habitat relief and patchiness to describe nine hard-bottom and coral reef habitats encountered from 1-33 m depth. We provide estimates of area by habitat type for no-take marine protected areas in the Tortugas region. Updated information on the spatial distribution and characteristics of benthic habitats will be used to guide future monitoring, assessment, and management activities in the region. Significant data gaps still exist for the western area of the Florida Keys National Marine Sanctuary and are a priority for future research.

A Comparison of Spatial and Movement Patterns between Sympatric Predators: Bull Sharks (Carcharhinus leucas) and Atlantic Tarpon (Megalops atlanticus)

Background Predators can impact ecosystems through trophic cascades such that differential patterns in habitat use can lead to spatiotemporal variation in top down forcing on community dynamics. Thus, improved understanding of predator movements is important for evaluating the potential ecosystem effects of their declines. Methodology/Principal Findings We satellite-tagged an apex predator (bull sharks, Carcharhinus leucas) and a sympatric mesopredator (Atlantic tarpon, Megalops atlanticus) in southern Florida waters to describe their habitat use, abundance and movement patterns. We asked four questions: (1) How do the seasonal abundance patterns of bull sharks and tarpon compare? (2) How do the movement patterns of bull sharks and tarpon compare, and what proportion of time do their respective primary ranges overlap? (3) Do tarpon movement patterns (e.g., straight versus convoluted paths) and/or their rates of movement (ROM) differ in areas of low versus high bull shark abundance? and (4) Can any general conclusions be reached concerning whether tarpon may mitigate risk of predation by sharks when they are in areas of high bull shark abundance? Conclusions/Significance Despite similarities in diet, bull sharks and tarpon showed little overlap in habitat use. Bull shark abundance was high year-round, but peaked in winter; while tarpon abundance and fishery catches were highest in late spring. However, presence of the largest sharks (>230 cm) coincided with peak tarpon abundance. When moving over deep open waters (areas of high shark abundance and high food availability) tarpon maintained relatively high ROM in directed lines until reaching shallow structurally-complex areas. At such locations, tarpon exhibited slow tortuous movements over relatively long time periods indicative of foraging. Tarpon periodically concentrated up rivers, where tracked bull sharks were absent. We propose that tarpon trade-off energetic costs of both food assimilation and osmoregulation to reduce predation risk by bull sharks.

Influence of marine reserve size and boundary length on the initial response of exploited reef fishes in the Florida Keys National Marine Sanctuary, USA

We examine the influence of reserve size and boundary length on the relative rate of fish density change in reserves versus fished reference reefs for three exploitable-sized reef fish categories: (1) combined fish (34 species of Haemulidae, Lutjanidae, Serranidae, and hogfish Lachnolaimus maximus); (2) Haemulidae (13 species); and (3) Lutjanidae (9 species). If reef habitat boundaries are highly permeable to fish movements then fish recovery within a reserve would be inversely proportional to: reserve perimeter (RP)/total reserve area (RA) (RP/RA). If, however, reef habitat boundaries are relatively impermeable barriers to fish movements, recovery within the reserve would be inversely proportional to: reserve boundary that intersects reef habitat (HI)/reef habitat area within the reserve (HA) (HI/HA). From 1994 to 2001 we monitored reef fishes within and outside of no-take marine reserves established in 1997 in the Florida Keys, USA. A significant majority of reserves had greater rates of density change than reference reefs for Lutjanidae and combined fish (22 of 24 reserves for both categories). Significantly higher rates of density change were found in ten reserves for Lutjanidae, two reserves for combined fish, and one reserve for Haemulidae. Reserves appeared to promote an increased density of exploitable fishes. A significant, negative, but weakly correlated relationship was found between the relative rate of density change (RDC) for combined fish and the HI/HA ratio. Reserve size and placement appeared to have a minimal effect upon RDC.

Length-Based Assessment of Coral Reef Fish Populations in the Main and Northwestern Hawaiian Islands

The coral reef fish community of Hawaii is composed of hundreds of species, supports a multimillion dollar fishing and tourism industry, and is of great cultural importance to the local population. However, a major stock assessment of Hawaiian coral reef fish populations has not yet been conducted. Here we used the robust indicator variable “average length in the exploited phase of the population (L¯)”, estimated from size composition data from commercial fisheries trip reports and fishery-independent diver surveys, to evaluate exploitation rates for 19 Hawaiian reef fishes. By and large, the average lengths obtained from diver surveys agreed well with those from commercial data. We used the estimated exploitation rates coupled with life history parameters synthesized from the literature to parameterize a numerical population model and generate stock sustainability metrics such as spawning potential ratios (SPR). We found good agreement between predicted average lengths in an unfished population (from our population model) and those observed from diver surveys in the largely unexploited Northwestern Hawaiian Islands. Of 19 exploited reef fish species assessed in the main Hawaiian Islands, 9 had SPRs close to or below the 30% overfishing threshold. In general, longer-lived species such as surgeonfishes, the redlip parrotfish (Scarus rubroviolaceus), and the gray snapper (Aprion virescens) had the lowest SPRs, while short-lived species such as goatfishes and jacks, as well as two invasive species (Lutjanus kasmira and Cephalopholis argus), had SPRs above the 30% threshold.

Population-dynamic instability as a cause of patch structure

Abstract Understanding how ocean ecosystem dynamics are driven by the coupling of trophodynamic interactions and physical factors and how these affect recruitment is one of the critical problems in biological oceanography. This paper attempts to contribute insights into these interactions by defining a population-dynamic/physical-forcing space in which it may be possible to begin unification of historical work on trophic webs, functional responses, and patch structure. We use more or less traditional reaction-diffusion equations to facilitate exploration of prey-predator relative motion effects on spatial distributions. As a particular example, reparameterization of a nondimensionalized version of the model applied to two kinds of trophodynamic interactions allows concentration upon the role of diffusion-driven instability in generating spatial patch structures of prey and predator abundance.