Ji-Won Moon

Metal Reduction and Iron Biomineralization by a Psychrotolerant Fe(III)-Reducing Bacterium, Shewanella sp. Strain PV-4

ABSTRACT A marine psychrotolerant, dissimilatory Fe(III)-reducing bacterium, Shewanella sp. strain PV-4, from the microbial mat at a hydrothermal vent of Loihi Seamount in the Pacific Ocean has been further characterized, with emphases on metal reduction and iron biomineralization. The strain is able to reduce metals such as Fe(III), Co(III), Cr(VI), Mn(IV), and U(VI) as electron acceptors while using lactate, formate, pyruvate, or hydrogen as an electron donor. Growth during iron reduction occurred over the pH range of 7.0 to 8.9, a sodium chloride range of 0.05 to 5%, and a temperature range of 0 to 37°C, with an optimum growth temperature of 18°C. Unlike mesophilic dissimilatory Fe(III)-reducing bacteria, which produce mostly superparamagnetic magnetite (<35 nm), this psychrotolerant bacterium produces well-formed single-domain magnetite (>35 nm) at temperatures from 18 to 37°C. The genome size of this strain is about 4.5 Mb. Strain PV-4 is sensitive to a variety of commonly used antibiotics except ampicillin and can acquire exogenous DNA (plasmid pCM157) through conjugation.

Water Quality and Pollution in the Hunchun Basin, China

Chemical properties and pollution of water resources were studied in the Hunchun basin, which is located in northeast China and borders directly North Korea and Russia along the Tumen river. Water quality was characterised according to its major constituents and geological features. Ground waters could generally be grouped into (Ca+Mg)-HCO3 type and (Ca+Mg)-(SO3+Cl) type in first and the second terrace areas, respectively. The mixing of these two types depends on the local conditions, such as pumping or permeability variations.Hunchun city is a pollution source for local water resources due to its uncontrolled sewage and urban discharge. In a previous study of the southwestern part of the Hunchun basin, groundwater contamination by Fe, Mn and NO3-N was reported. In addition, this study identified Cd and F as prevailing contaminants in the water resources. Pollution of water resources by these contaminants appeared to be affected by the application of fertilisers, irrigation practice, variation of aquifer characteristics, solubility of mineral phases, and discharge of domestic sewage. Wide distribution and high levels of Cd and F in surface- and ground waters could pose significant problems if they are utilised as major water supply sources.

Clay minerals from tidal flat sediments at Youngjong Island, Korea, as a potential indicator of sea-level change

Abstract Clay minerals from the tidal flat sediments along the coast of Youngjong Island, west of mainland Korea, were studied to ascertain their potential as an indicator of sea-level fluctuation. Semi-quantitative analysis of their clay-size fractions by XRD shows that the vertical distribution of clay minerals can be separated into four clay mineral assemblage units. Based on the relative contents of chlorite, four sedimentary units are distinguishable, and the abundance of chlorite is inversely related to that of smectite. The kaolinite content is constant, and so it is clear that chlorite originating from the Han River was transformed to smectite by pedogenesis during regression periods. Therefore, the relative contents of clay minerals from the unconsolidated materials in the tidal flat of Youngjong Island can be used as indicators of transgression and regression in accordance with the sea-level fluctuation.

Water Quality Impact of Mining in the Wolmyoung Area of Korea, and its Short-Term Changes

The water quality of a stream affected by miningactivities was investigated on the basis of a mineralogical studyfor the related solids, and their subsequent changes weremonitored for a year, so as to clarify the impact of the acidmine drainage (AMD) to the stream. The mine-affected stream wasclassified into Ca–Mg and sulfate type, and the concentrations ofits major constituents ranged from tens to hundreds times higherthan those of the background stream. This was most likely due toacid-generating reactions involving the oxidation of sulfides inthe mineralized zone, and subsequent neutralizations involvingcalcite and chlorite as possible sources of Ca and Mg,respectively. This interpretation is consistent with thethermodynamic and mass-balance calculations. The concentrationsof the dissolved constituents changed seasonally, dependinglargely on rainfall in the mine-affected stream. However, thedramatic decrease in the ratio of Mg/Ca, independent of rainfall,indicates that some changes did occur in sources, including theheterogeneous distribution of main source materials, the changein chemical conditions, especially in pH, pe(Eh), and PCO2,in the reacting fluid, and the consequential solubility changesin sources. In spite of the limitations of short-term monitoring,it does provide some meaningful information in order to constructa long-term monitoring program.

Aluminum Solubility of Andisols in Jeju Island, Korea

The solubility of aluminum for two Andisol profiles formed on pyroclastic materials and basaltic rocks from Jeju Island, Korea was investigated. It is found that high organic carbon content and ratios in the A horizons, suggesting the substantial amounts of reactive Al are associated with organic matter, whereas the low organic carbon content and the ratios in the Bo horizons indicate that a major part of the reactive Al should be bound inorganically. The differential FT-IR spectra following acid-oxalate dissolution and heating up to 150 and , and transmission electron microscope (TEM) observation confirm that imogolite is in the Bo horizon. Our results of equilibration experiments demonstrate that the Al solubility in the Bo horizon for Andisols can be clarified by the congruent dissolution model for imogolite-type material (ITM), rather than by the simultaneous equilibrium with both ITM and Al hydroxy-interlayered aluminosilicate. With results from dialysis and aging procedures, it is noted that the formation of a proto imogolite sol showing its transformation to imogolite, which supports the congruent dissolution of ITM primarily controlling the Al solubility of Andisols in Jeju Island, Korea.

Biogeochemical Remediation of Cr(VI)-Contaminated Groundwater using MMPH-0 (Enterobacter aerogenes)

Indigenous bacteria isolated from contaminated sites play important roles to remediate contaminated groundwater. Chromium has the most stable oxidation states. Cr(VI) is toxic, carcinogenic, and mobile, but Cr(III) is less toxic and immobile. In this study, indigenous microorganism (MMPH-0) was enriched from Cr(VI) contaminated groundwater, and identified by 16S rRNA gene analysis. Using MMPH-0, the effect of stimulating with e-donors (glucose, lactate, acetate, and no e-donor control), respiration conditions, biomass, tolerance, and geochemical changes on Cr(VI) reduction were investigated in batch experiments for 4 weeks. The changes of Cr(VI) concentration and geochemical conditions were monitored using UV-vis-spectrophotometer and Eh-pH meter. And the morphological and chemical characteristics of MMPH-0 and precipitates in the effluents were characterized by TEM-EDS and SEM-EDS analyses. MMPH-0 (Enterobacter aerogenes) was able to tolerate up to 2000 mg/L Cr(VI) and reduce Cr(VI) under aerobic and anaerobic conditions. MMPH-0 performed faster and higher efficiency of Cr(VI) reduction with electron donors (over 70% after 1 week with e-donor, 10-20% after 4 weeks without e-donor). The changes of Eh-pH in effluents showing the tendency from oxidizing to reducing condition and a bit of acidic change in pH due to microbial oxidation of organic matters donating electrons and protons suggested the roles of MMPH-0 on Cr(VI) in the contaminated water catalyzing to transit geochemical stable zone for more stable or Cr(III) precipitates. TEM/SEM-EDS analyses of MMPH-0 and precipitates indicate direct and indirect Cr(VI) reduction: extracellular polymers capturing Cr component outside cells. These results suggested diverse indigenous bacteria and their biogeochemical reactions might enhance more effective and feasible remediation technology of redox sensitive heavy metals in metal-contaminated in groundwater.

Soil Water Characteristics of Cores from Low- and High-Centered Polygons, Barrow, Alaska, 2012

This dataset includes soil water characteristic curves for soil and permafrost in two representative frozen cores collected from a high-center polygon (HCP) and a low-center polygon (LCP) from the Barrow Environmental Observatory. Data include soil water content and soil water potential measured using the simple evaporation method for hydrological and biogeochemical simulations and experimental data analysis. Data can be used to generate a soil moisture characteristic curve, which can be fit to a variety of hydrological functions to infer critical parameters for soil physics. Considering the measured the soil water properties, the van Genuchten model predicted well the HCP, in contrast, the Kosugi model well fitted LCP which had more saturated condition.

Review: Magnetite Synthesis using NanoFermentation

Biomineralization has been explored for geochemical cycles and microbial tolerance mechanisms to metal toxicity. Here, we are introducing NanoFermentation which enables economic, environmentally friendly, requiring low input energy, and scalable manufacturing of nano-dimensioned magnetite. We are also focusing on controlling factors of crystallite size which can determine superparamagnetism and ferrimagnetism. Controlling factors are such as microbial species, temperature, incubation time, medium composition, substituted elements and their concentration, precursor type, reaction volume, precursor concentration density and their combinations. Crystallite size distribution of biomagnetite depends on the balance between nuclei generation and crystal growth. Biomineralization will elucidate elemental cycles on earth crust and microbial ecology as well as it will be applied to material sciences and devices via massive production of nanomaterials.