Jiri Barnat
Masaryk University
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Publication
Featured researches published by Jiri Barnat.
international workshop on model checking software | 2001
Jiri Barnat; Luboš Brim; Jitka St rcirc; íbrná
In this paper we propose a distributed algorithm for model-checking LTL. In particular, we explore the possibility of performing nested depth-first search algorithm in distributed SPIN. A distributed version of the algorithm is presented, and its complexity is discussed.
international parallel and distributed processing symposium | 2011
Jiri Barnat; Petr Bauch; Luboš Brim; Milan Ceka
The problem of decomposing a directed graph into its strongly connected components is a fundamental graph problem inherently present in many scientific and commercial applications. In this paper we show how some of the existing parallel algorithms can be reformulated in order to be accelerated by NVIDIA CUDA technology. In particular, we design a new CUDA-aware procedure for pivot selection and we adapt selected parallel algorithms for CUDA accelerated computation. We also experimentally demonstrate that with a single GTX 480 GPU card we can easily outperform the optimal serial CPU implementation by an order of magnitude in most cases, 40 times on some sufficiently big instances. This is an interesting result as unlike the serial CPU case, the asymptotic complexity of the parallel algorithms is not optimal.
international parallel and distributed processing symposium | 2009
Kees Verstoep; Henri E. Bal; Jiri Barnat; Luboš Brim
Model checking is a popular technique to systematically and automatically verify system properties. Unfortunately, the well-known state explosion problem often limits the extent to which it can be applied to realistic specifications, due to the huge resulting memory requirements. Distributed-memory model checkers exist, but have thus far only been evaluated on small-scale clusters, with mixed results. We examine one well-known distributed model checker, DiVinE, in detail, and show how a number of additional optimizations in its runtime system enable it to efficiently check very demanding problem instances on a large-scale, multi-core compute cluster. We analyze the impact of the distributed algorithms employed, the problem instance characteristics and network overhead. Finally, we show that the model checker can even obtain good performance in a high-bandwidth computational grid environment.
international conference on parallel and distributed systems | 2009
Jiri Barnat; Lubo Brim; Milan Ceka; Tomá Lamr
Recent technological developments made available various many-core hardware platforms. For example, a SIMD-like hardware architecture became easily accessible for many users who have their computers equipped with modern NVIDIA GPU cards with CUDA technology. In this paper we redesign the maximal accepting predecessors algorithm [7] for LTL model checking in terms of matrix-vector product in order to accelerate LTL model checking on many-core GPU platforms. Our experiments demonstrate that using the NVIDIA CUDA technology results in a significant speedup of verification process.
IEEE/ACM Transactions on Computational Biology and Bioinformatics | 2012
Jiri Barnat; Luboš Brim; Adam Krejci; Adam Streck; David Šafránek; Martin Vejnar; Tomáš Vejpustek
An important problem in current computational systems biology is to analyze models of biological systems dynamics under parameter uncertainty. This paper presents a novel algorithm for parameter synthesis based on parallel model checking. The algorithm is conceptually universal with respect to the modeling approach employed. We introduce the algorithm, show its scalability, and examine its applicability on several biological models.
automated technology for verification and analysis | 2008
Jiri Barnat; Luboš Brim; Petr Ročkai
We present a tool for parallel shared-memory enumerative LTL model-checking and reachability analysis. The tool is based on distributed-memory algorithms reimplemented specifically for multi-core and multi-cpu environments using shared memory. We show how the parallel algorithms allow the tool to exploit the power of contemporary hardware, which is based on increasing number of CPU cores in a single system, as opposed to increasing speed of a single CPU core.
software engineering and formal methods | 2010
Jiri Barnat; Luboš Brim; Petr Ročkai
Partial order reduction and distributed-memory processing are the two essential techniques to fight the well-known state space explosion problem in explicit state model checking. Unfortunately, these two techniques have not been integrated yet to a satisfactory degree. While for verification of safety properties, there are a few rather successful approaches to parallel partial order reduction, for LTL model checking all suggested approaches are either too technically involved to be smoothly incorporated with the existing parallel algorithms, or they are simply weak in the sense that the achieved reduction in the size of the state space is minor. The main source of difficulties is the cycle proviso that requires one fully expanded state on every cycle in the reduced state space graph. This can be easily achieved in the sequential case by employing depth-first search strategy for state space generation. Unfortunately, this strategy is incompatible with parallel (hence distributed-memory) processing, which limits application of partial order reduction technique to the sequential case. In this paper we suggest a new technique that guarantees correct construction of the reduced state space graph w.r.t. the cycle proviso. Our new technique is fully compatible with the parallel graph traversal procedure while at the same time it provides competitive reduction of the state space if compared to the serial case. The new technique has been implemented within the parallel and distributed-memory LTL model checker DiVinE and its performance is reported in this paper.
computer aided verification | 2007
Jiri Barnat; Luboš Brim; Pavel Šimeček
We show how to adapt an existing non-DFS-based accepting cycle detection algorithm OWCTY [10,15,29] to the I/O efficient setting and compare its I/O efficiency and practical performance to the existing I/O efficient LTL model checking approach of Edelkamp and Jabbar [14]. The new algorithm exhibits similar I/O complexity with respect to the size of the graph while it avoids quadratic increase in the size of the graph. Therefore, the number of I/O operations performed is significantly lower and the algorithm exhibits better practical performance.
conference on decision and control | 2010
Jana Tumova; Boyan Yordanov; Calin Belta; Ivana Černá; Jiri Barnat
We present a computational framework for automatic synthesis of a feedback control strategy for a piecewise affine (PWA) system from a specification given as a Linear Temporal Logic (LTL) formula over an arbitrary set of linear predicates in its state variables. First, by defining partitions for its state and input spaces, we construct a finite abstraction of the PWA system in the form of a control transition system. Second, we develop an algorithm to generate a control strategy for the finite abstraction. While provably correct and robust to small perturbations in both state measurements and applied inputs, the overall procedure is conservative and expensive. The proposed algorithms have been implemented and are available for download. Illustrative examples are included
formal methods for industrial critical systems | 2012
Jiri Barnat; Jan Beran; Luboš Brim; Tomáš Kratochvíla; Petr Ročkai
Embedded systems have become an inevitable part of control systems in many industrial domains including avionics. The nature of this domain traditionally requires the highest possible degree of system availability and integrity. While embedded systems have become extremely complex and they have been continuously replacing legacy mechanical components, the amount of defects of hardware and software has to be kept to absolute minimum to avoid casualties and material damages. Despite the above-mentioned facts, significant improvements are still required in the validation and verification processes accompanying embedded systems development. In this paper we report on integration of a parallel, explicit-state LTL model checker (DiVinE) and a tool for requirements-based verification of aerospace system components (HiLiTE, a tool implemented and used by Honeywell). HiLiTE and the proposed partial toolchain use MATLAB Simulink/Stateflow as the primary design language. The work has been conducted within the Artemis project industrial Framework for Embedded Systems Tools (iFEST).