Joakim Andréasson

Smart molecules at work—mimicking advanced logic operations

Molecular logic is an interdisciplinary research field, which has captured worldwide interest. This tutorial review gives a brief introduction into molecular logic and Boolean algebra. This serves as the basis for a discussion of the state-of-the-art and future challenges in the field. Representative examples from the most recent literature including adders/subtractors, multiplexers/demultiplexers, encoders/decoders, and sequential logic devices (keypad locks) are highlighted. Other horizons, such as the utility of molecular logic in bio-related applications, are discussed as well.

All-Photonic Multifunctional Molecular Logic Device

Photochromes are photoswitchable, bistable chromophores which, like transistors, can implement binary logic operations. When several photochromes are combined in one molecule, interactions between them such as energy and electron transfer allow design of simple Boolean logic gates and more complex logic devices with all-photonic inputs and outputs. Selective isomerization of individual photochromes can be achieved using light of different wavelengths, and logic outputs can employ absorption and emission properties at different wavelengths, thus allowing a single molecular species to perform several different functions, even simultaneously. Here, we report a molecule consisting of three linked photochromes that can be configured as AND, XOR, INH, half-adder, half-subtractor, multiplexer, demultiplexer, encoder, decoder, keypad lock, and logically reversible transfer gate logic devices, all with a common initial state. The system demonstrates the advantages of light-responsive molecules as multifunctional, reconfigurable nanoscale logic devices that represent an approach to true molecular information processing units.

Molecular All-Photonic Encoder−Decoder

In data processing, an encoder can compress digital information for transmission or storage, whereas a decoder recovers the information in its original form. We report a molecular triad consisting of a dithienylethene covalently linked to two fulgimide photochromes that performs as an all-photonic single-bit 4-to-2 encoder and 2-to-4 decoder. The encoder compresses the information contained in the four inputs into two outputs. The inputs are light of four different wavelengths that photoisomerize the fulgimide, dithienylethene, or both. The outputs are absorbance at two wavelengths. The two decoder inputs are excitation at two wavelengths, whereas the four outputs, which recover the information compressed into the inputs, are absorbance at two wavelengths, transmittance at one wavelength, and fluorescence emission. The molecule can be cycled through numerous encoder and decoder functions without significant photodecomposition. Molecular photonic encoders and decoders could potentially be used for labeling and tracking of nano- and microscale objects as well as for data manipulation.

Switching of a photochromic molecule on gold electrodes: single-molecule measurements

We have studied the electronic changes caused by light-induced isomerization of a photochromic molecule between an open state (that absorbs in the UV to become closed) and a closed state (that absorbs in the visible to become open). Data obtained using a newly developed repetitive break junction method are interpreted in terms of single-molecule resistances of 526 +/- 90 M Omega in the open form and 4 +/- 1 M Omega in the closed form when the molecule is bound between two gold contacts via dithiol linkages. The corresponding ratio of open to closed resistance is in close agreement with the results of ab initio calculations, though the measured resistances are about half of the calculated values. Optical spectroscopy indicates that the photoisomerization occurs in both directions on small gold particles, evaporated thin gold films, and in the break junction experiments.

Photoswitched DNA-Binding of a Photochromic Spiropyran

The dramatically different DNA-binding properties of the two isomeric forms of a photochromic spiropyran have been demonstrated, enabling photoswitched DNA binding. The closed, UV-absorbing form shows no signs of interaction with DNA. Upon UV exposure the spiropyran is isomerized to the open form that binds to DNA by intercalation. The process is fully reversible as the corresponding dissociation process is induced by visible light.

Data and signal processing using photochromic molecules

Photochromes are chromophores that are reversibly isomerized between two metastable forms using light, or light and heat. When photochromes are covalently linked to other chromophores, they can act as molecular photonic analogues of electronic transistors. As bistable switches, they can be incorporated into the design of molecules capable of binary arithmetic and both combinatorial and sequential digital logic operations. Small ensembles of such molecules can perform analogue signal modulation similar to that carried out by transistor amplifiers. Examples of molecules that perform multiple logic functions, act as control elements for fluorescent reporters, and mimic natural photoregulatory functions are presented.

An all-photonic molecular keypad lock.

Off and on: A molecular triad, consisting of a porphyrin linked to two different, independently addressable photochromic moieties, functions as a molecular keypad lock with all-photonic inputs and output. The porphyrin correlates the responses of the two inputs to light of different wavelengths and provides an appropriate output as fluorescence, which results only when one of eight possible input combinations has been applied (see figure).

Photochromic supramolecular memory with nondestructive readout.

Looking without touching: The light-controlled isomerization of a complex containing a pyridine-appended dithienylethene (DTE; green) and a porphyrin dimer induces dramatic structural and spectral changes (see picture). These changes are monitored in a region outside the photochromically active absorption bands of DTE, therefore allowing a nondestructive readout so that the process functions as a molecular optically controlled memory.

Information processing with molecules--Quo vadis?

Information processing at the molecular level is coming of age. Since the first molecular AND gate was proposed about 20 years ago, the molecular interpretation of binary logic has become vastly more sophisticated and complex. However, the field is also at a crossroads. While cleverly designed molecular building blocks are abundant, difficult questions remain. How can molecular components be flexibly assembled into larger circuits, and how can these components communicate with one another. The concept of all-photonic switching with photochromic supermolecules has shown some interesting potential and is discussed in this review. Although the field of molecular logic was originally discussed mainly in terms of a technology that might compete with solid-state computers, potential applications have expanded to include clever molecular systems and materials for drug delivery, sensing, probing, encoding, and diagnostics. These upcoming trends, which are herein illustrated by selected examples, deserve general attention.

An All-Photonic Molecule-Based D Flip-Flop

The photochromic fluorescence switching of a fulgimide derivative was used to implement the first molecule-based D (delay) flip-flop device, which works based on the principles of sequential logic. The device operates exclusively with photonic signals and can be conveniently switched in repeated cycles.