João M. Neto

Good Environmental Status of marine ecosystems: What is it and how do we know when we have attained it?

The European Marine Strategy Framework Directive (MSFD) requires EU Member States (MS) to achieve Good Environmental Status (GEnS) of their seas by 2020. We address the question of what GEnS entails especially with regard to the level at which targets are set (descriptors, criteria, indicators), to scales for assessments (regional, sub-divisions, site-specific), and to difficulties in putting into practice the GEnS concept. We propose a refined and operational definition of GEnS, indicating the data and information needed to all parts of that definition. We indicate the options for determining when GEnS has been met, acknowledge the data and information needs for each option, and recommend a combination of existing quantitative targets and expert judgement. We think that the MSFD implementation needs to be less complex than shown for other similar directives, can be based largely on existing data and can be centred on the activities of the Regional Seas Conventions.

Response of single benthic metrics and multi-metric methods to anthropogenic pressure gradients, in five distinct European coastal and transitional ecosystems

In recent times many benthic indices have been proposed to assess the ecological quality of marine waters worldwide. In this study we compared single metrics and multi-metric methods to assess coastal and transitional benthic status along human pressure gradients in five distinct environments across Europe: Varna bay and lake (Bulgaria), Lesina lagoon (Italy), Mondego estuary (Portugal), Basque coast (Spain) and Oslofjord (Norway). Hence, 13 single metrics (abundance, number of taxa, and several diversity and sensitivity indices) and eight of the most common indices used within the European Water Framework Directive (WFD) for benthic assessment were selected: index of size spectra (ISS), Benthic assessment tool (BAT), Norwegian quality index (NQI), Multivariate AMBI (M-AMBI), Benthic quality index (BQI), (Benthic ecosystem quality index (BEQI), Benthic index based on taxonomic sufficiency (BITS), and infaunal quality index (IQI). Within each system, sampling sites were ordered in an increasing pressure gradient according to a preliminary classification based on professional judgement. The different indices are largely consistent in their response to pressure gradient, except in some particular cases (i.e. BITS, in all cases, or ISS when a low number of individuals is present). Inconsistencies between indicator responses were most pronounced in transitional waters (i.e. IQI, BEQI), highlighting the difficulties of the generic application of indicators to all marine, estuarine and lagoonal environments. However, some of the single (i.e. ecological groups approach, diversity, richness) and multi-metric methods (i.e. BAT, M-AMBI, NQI) were able to detect such gradients both in transitional and coastal environments, being these multi-metric methods more consistent in the detection than single indices. This study highlights the importance of survey design and good reference conditions for some indicators. The agreement observed between different methodologies and their ability to detect quality trends across distinct environments constitutes a promising result for the implementation of the WFDs monitoring plans. Moreover, these results have management implications, regarding the dangers of misclassification, uncertainty in the assessment, use of conflicting indices, and testing and validation of indices.

Diversity of European seagrass indicators: patterns within and across regions

Seagrasses are key components of coastal marine ecosystems and many monitoring programmes worldwide assess seagrass health and apply seagrasses as indicators of environmental status. This study aims at identifying the diversity and characteristics of seagrass indicators in use within and across European ecoregions in order to provide an overview of seagrass monitoring effort in Europe. We identified 49 seagrass indicators used in 42 monitoring programmes and including a total of 51 metrics. The seagrass metrics represented 6 broad categories covering different seagrass organizational levels and spatial scales. The large diversity is particularly striking considering that the pan-European Water Framework Directive sets common demands for the presence and abundance of seagrasses and related disturbance-sensitive species. The diversity of indicators reduces the possibility to provide pan-European overviews of the status of seagrass ecosystems. The diversity can be partially justified by differences in species, differences in habitat conditions and associated communities but also seems to be determined by tradition. Within each European region, we strongly encourage the evaluation of seagrass indicator–pressure responses and quantification of the uncertainty of classification associated to the indicator in order to identify the most effective seagrass indicators for assessing ecological quality of coastal and transitional water bodies.

The robustness of ecological indicators to detect long-term changes in the macrobenthos of estuarine systems

Accurate and reliable benthic quality indicators are in great demand following the recent developments and the strict time schedule for implementing the European Water Framework Directive. The Mondego estuary has experienced a progressive deterioration during the 1990s, followed by a partial ecological recovery due to restoration measures in 1997/1998. We have used the estuary as a model system to test the performance and robustness of a set of ecological indicators in highlighting the changes in the ecological state of intertidal areas. Over a period of 17 years (1985-2002), we calculated Margalef, Shannon-Wiener, Berger-Parker, Taxonomic Distinctness measures, AZTIs Marine Biotic Index, Infaunal Trophic Index, and Eco-Exergy based indices and tested differences across periods characterised by different anthropogenic disturbance. We combined temporal data within three periods: before, during and after disturbance, based on progressive information on the changes in the extended type of anthropogenic disturbance. Indices were then compared with biological and abiotic descriptors (macroalgae, macrophytes, benthic macrofauna, nutrients concentration, sediment grain size and total organic carbon). We found great disparity in the indicators ability to capture temporal changes, showing distinct performances at each site. At the Zostera noltii site, only Margalef, Total Taxonomic Distinctness and the thermodynamically based indices captured temporal changes, despite giving higher values during the disturbance period. At the bare sediment site, Taxonomic Distinctness, ITI, Shannon-Wiener, Berger-Parker, AMBI and the TBI were able to distinguish between periods, in agreement with the differences observed analysing the macrobenthic assemblages. Furthermore, Taxonomic Distinctness was not robust enough to detect any temporal or spatial change. We thus suggest further research to understand the behaviour of ecological indicators, in view of their crucial importance for the management and protection of marine coastal areas.

The use of nursery areas by juvenile fish in a temperate estuary, Portugal

The nursery role of the Mondego estuary for marine fish species was studied between June 2003 and May 2004. The spatial and temporal distribution and abundance patterns of 0-group Dicentrarchuslabrax (Linnaeus, 1758), Platichthysflesus (Linnaeus, 1758) and Solea solea (Linnaeus, 1758) were analyzed based on monthly sampling surveys in five stations along the estuarine gradient. Fishing took place during the night at low water of spring tides, using a 2 m beam trawl. The spatial patterns of estuarine colonization were different according to species. D. labrax showed a wider distribution, but the main nursery ground was the same as for S. solea. Highest densities of S. solea juveniles were found in oligohaline areas, with muddy bottoms and high benthic invertebrates availability, while P. flesus occurred mainly in the sandy uppermost areas. D. labrax was found in both these areas. Fish abundance in the estuary mainly reflected seasonal changes.

Tales from a thousand and one ways to integrate marine ecosystem components when assessing the environmental status

Assessing the environmental status of marine ecosystems is useful when communicating key messages to policymakers or the society, reducing the complex information of the multiple ecosystem and biodiversity components and their important spatial and temporal variability into manageable units. Taking into account the ecosystem components to be addressed (e.g. biological, chemical, physical), the numerous biodiversity elements to be assessed (e.g. from microbes to sea mammals), the different indicators needed to be studied (e.g. in Europe, 56 indicators of status have been selected), and the different assessment scales to be undertaken (e.g. from local to regional sea scale), some criteria to define spatial scales and some guidance on aggregating and integrating information is needed. We have reviewed, from ecological and management perspectives, the approaches for aggregating and integrating currently available for marine status assessment in Europe and other regions of the world. Advantages and shortcomings of the different alternatives are highlighted. We provide some guidance on the steps towards defining rules for aggregation and integration of information at multiple levels of ecosystem organization, providing recommendations on when using specific rules in the assessment. A main conclusion is that any integration principle used should be ecologically-relevant, transparent and well documented, in order to make it comparable across different geographic regions.

Salinity as the major factor affecting Scirpus maritimus annual dynamics: Evidence from field data and greenhouse experiment

Abstract During the life cycle of Scirpus maritimus , ramets produce photosynthetic shoots that are active for a single growing season and only the belowground parts persist into the next year. Several authors have described that the growing season of S. maritimus in Europe and North America occurs between April and September of each year. In the Mondego estuary (western coast of Portugal) the life cycle of S. maritimus showed an opposite seasonal pattern, with a growing season from January to April/May. It was hypothesised that seasonal fluctuations in salinity, connected to salinity tolerance, could explain this contrasting annual cycle. This hypothesis was tested using a greenhouse experiment. Exposure to different salinities significantly affected plant survival. During the first 10 days, the survival curves were very similar, which suggested that the plants were able to tolerate high salinity for short periods. After 2 weeks of exposure, the plants started to show differences, with increased mortality following the increase in salinity. Results show that a peculiar seasonal variation of salinity in the Mondego estuary affected the S. maritimus life cycle in this ecosystem and may explain the differences between these western Portugese populations and other European and North American populations.

The fish assemblage of the Mondego estuary : composition, structure and trends over the past two decades

The fish assemblage of the Mondego estuary was studied from June 2003 to May 2004. Five areas with different environmental conditions were sampled monthly, using a 2 m beam trawl (5 mm mesh size at the cod end). To complement information, sampling was also performed, seasonally, using a 7 m otter trawl with a 10 mm mesh size. Thirty-two species were identified. Dicentrarchus labrax, Pomatoschistus microps, Pomatoschistus minutus, Solea solea, Platichthys flesus and Diplodus vulgaris were the most abundant species. Marine juvenile migrants had the highest number of species, thirteen, followed by estuarine residents with eight species. Marine species that use the estuary as nursery grounds were the most abundant in terms of density and biomass. In spring and summer, juveniles occur in the upper, oligohaline areas, but afterwards, in autumn and winter, they tend to disperse to the middle and lower areas, with higher marine influence. Comparing the results obtained in this study with those reported in the early 1990’s, a marked decrease in species richness can be noticed, which is probably due to anthropogenic factors, namely an increase in depth of the main channel and intense euthrophication processes in the middle and upper areas.

Exploring the robustness of macrophyte-based classification methods to assess the ecological status of coastal and transitional ecosystems under the Water Framework Directive

Identifying and quantifying the factors that contribute to the potential misclassification of the ecological status of water bodies is a major challenge of the Water Framework Directive (WFD). The present study compiles extensive biomonitoring data from a range of macrophyte-based classification methods developed by several European countries. The data reflect spatial and temporal variation as well as inter-observer variation. Uncertainty analysis identified that factors related to the spatial scale of sampling generally contributed most to the uncertainty in classifying water bodies to their ecological status, reflecting the high horizontal and depth-related heterogeneity displayed by macrophyte communities. In contrast, the uncertainty associated with temporal variation was low. In addition, inter-observer variation, where assessed, did not contribute much to overall uncertainty, indicating that these methods are easily transferable and insensitive to observer error. The study, therefore, suggests that macrophyte-based sampling schemes should prioritize large spatial replication over temporal replication to maximize the effectiveness and reliability of water body classification within the WFD. We encourage conducting similar uncertainty analyses for new/additional ecological indicators to optimize sampling schemes and improve the reliability of classification of ecological status.

Response of intertidal macrobenthic communities to long term human induced changes in the Eo estuary (Asturias, Spain): Implications for environmental management

Long term macrobenthos data together with physical habitat parameters were analysed to investigate spatial and temporal changes at an estuary under different anthropogenic pressures, mainly increasing shellfish farming. The aim was to assess the possible impacts of these pressures on the macrobenthic communities by comparing a period before and after changes in these pressures. Benthic samples were seasonally collected in 1990 (before major anthropogenic changes), 2000 and 2005 at the same sampling stations located on three different habitats in the Eo estuary (Northern Spanish coast). Multivariate and univariate methods were used to assess spatial variability of benthic assemblages and to compare community changes over time. Data from 1990 was assumed as the reference situation to appraise the subsequent impacts. We observed a significant spatial variability of the benthic assemblages in the system as a function of habitat heterogeneity in relation to sediment composition, presence/absence and density of seagrasses, and hydrodynamic regime. Changes were detected in the community composition at all sites during this 15 year period. The extent of changes was related to initial community conditions, rather than the intensity of the pressure. The results suggest that the responses of the benthic communities to human induced perturbations occurring in the system are largely dependent on its intrinsic buffer capacity, and that these communities have been able to cope with an increasing environmental stress (organic enrichment). In conclusion, to keep shellfish farming at a sustainable level without undesirable impacts, the disturbance intensity must be kept below the system carrying capacity. This will allow natural communities to cope with pressures and thus avoid further deterioration in ecological quality.