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Featured researches published by Johan Six.


Plant and Soil | 2002

Stabilization mechanisms of soil organic matter: Implications for C-saturation of soils

Johan Six; Richard T. Conant; Eldor A. Paul; Keith Paustian

The relationship between soil structure and the ability of soil to stabilize soil organic matter (SOM) is a key element in soil C dynamics that has either been overlooked or treated in a cursory fashion when developing SOM models. The purpose of this paper is to review current knowledge of SOM dynamics within the framework of a newly proposed soil C saturation concept. Initially, we distinguish SOM that is protected against decomposition by various mechanisms from that which is not protected from decomposition. Methods of quantification and characteristics of three SOM pools defined as protected are discussed. Soil organic matter can be: (1) physically stabilized, or protected from decomposition, through microaggregation, or (2) intimate association with silt and clay particles, and (3) can be biochemically stabilized through the formation of recalcitrant SOM compounds. In addition to behavior of each SOM pool, we discuss implications of changes in land management on processes by which SOM compounds undergo protection and release. The characteristics and responses to changes in land use or land management are described for the light fraction (LF) and particulate organic matter (POM). We defined the LF and POM not occluded within microaggregates (53–250 μm sized aggregates as unprotected. Our conclusions are illustrated in a new conceptual SOM model that differs from most SOM models in that the model state variables are measurable SOM pools. We suggest that physicochemical characteristics inherent to soils define the maximum protective capacity of these pools, which limits increases in SOM (i.e. C sequestration) with increased organic residue inputs.


Soil Biology & Biochemistry | 2000

Soil macroaggregate turnover and microaggregate formation : a mechanism for C sequestration under no-tillage agriculture

Johan Six; Edward T. Elliott; Keith Paustian

Soil disturbance from tillage is a major cause of organic matter depletion and reduction in the number and stability of soil aggregates when native ecosystems are converted to agriculture. No-till (NT) cropping systems usually exhibit increased aggregation and soil organic matter relative to conventional tillage (CT). However, the extent of soil organic matter changes in response to NT management varies between soils and the mechanisms of organic matter stabilization in NT systems are unclear. We evaluated a conceptual model which links the turnover of aggregates to soil organic matter dynamics in NT and CT systems; we argue that the rate of macroaggregate formation and degradation (i.e. aggregate turnover) is reduced under NT compared to CT and leads to a formation of stable microaggregates in which carbon is stabilized and sequestered in the long term. Therefore, the link between macroaggregate turnover, microaggregate formation, and C stabilization within microaggregates partly determines the observed soil organic matter increases under NT.


Biogeochemistry | 2000

Management options for reducing CO2 emissions from agricultural soils

Keith Paustian; Johan Six; Edward T. Elliott; H. W. Hunt

Crop-based agriculture occupies 1.7 billion hectares, globally, with a soil C stock of about 170 Pg. Of the past anthropogenic CO2 additions to the atmosphere, about 50 Pg C came from the loss of soil organic matter (SOM) in cultivated soils. Improved management practices, however, can rebuild C stocks in agricultural soils and help mitigate CO2 emissions.Increasing soil C stocks requires increasing C inputs and/or reducing soil heterotrophic respiration. Management options that contribute to reduced soil respiration include reduced tillage practices (especially no-till) and increased cropping intensity. Physical disturbance associated with intensive soil tillage increases the turnover of soil aggregates and accelerates the decomposition of aggregate-associated SOM. No-till increases aggregate stability and promotes the formation of recalcitrant SOM fractions within stabilized micro- and macroaggregate structures. Experiments using13 C natural abundance show up to a two-fold increase in mean residence time of SOM under no-till vs intensive tillage. Greater cropping intensity, i.e., by reducing the frequency of bare fallow in crop rotations and increasing the use of perennial vegetation, can increase water and nutrient use efficiency by plants, thereby increasing C inputs to soil and reducing organic matter decomposition rates.Management and policies to sequester C in soils need to consider that: soils have a finite capacity to store C, gains in soil C can be reversed if proper management is not maintained, and fossil fuel inputs for different management practices need to be factored into a total agricultural CO2 balance.


Advances in Agronomy | 2005

Efficiency of Fertilizer Nitrogen in Cereal Production: Retrospects and Prospects

J. K. Ladha; H. Pathak; Timothy J. Krupnik; Johan Six; Chris van Kessel

Presently, 50% of the human population relies on nitrogen (N) fertilizer for food production. The world today uses around 83 million metric tons of N, which is about a 100‐fold increase over the last 100 years. About 60% of global N fertilizer is used for producing the worlds three major cereals: rice, wheat, and maize. Projections estimate that 50 to 70% more cereal grain will be required by 2050 to feed 9.3 billion people. This will require increased use of N of similar magnitude if the efficiency with which N is used by the crop is not improved. Fertilizer N‐recovery efficiency by the first crop is 30 to 50%. The remaining N either remains in the soil, the recovery of which in the following crops is very limited (


Nature | 2015

Productivity limits and potentials of the principles of conservation agriculture

Cameron M. Pittelkow; Xinqiang Liang; Bruce A. Linquist; Kees Jan van Groenigen; Juhwan Lee; Mark E. Lundy; Natasja van Gestel; Johan Six; Rodney T. Venterea; Chris van Kessel

One of the primary challenges of our time is to feed a growing and more demanding world population with reduced external inputs and minimal environmental impacts, all under more variable and extreme climate conditions in the future. Conservation agriculture represents a set of three crop management principles that has received strong international support to help address this challenge, with recent conservation agriculture efforts focusing on smallholder farming systems in sub-Saharan Africa and South Asia. However, conservation agriculture is highly debated, with respect to both its effects on crop yields and its applicability in different farming contexts. Here we conduct a global meta-analysis using 5,463 paired yield observations from 610 studies to compare no-till, the original and central concept of conservation agriculture, with conventional tillage practices across 48 crops and 63 countries. Overall, our results show that no-till reduces yields, yet this response is variable and under certain conditions no-till can produce equivalent or greater yields than conventional tillage. Importantly, when no-till is combined with the other two conservation agriculture principles of residue retention and crop rotation, its negative impacts are minimized. Moreover, no-till in combination with the other two principles significantly increases rainfed crop productivity in dry climates, suggesting that it may become an important climate-change adaptation strategy for ever-drier regions of the world. However, any expansion of conservation agriculture should be done with caution in these areas, as implementation of the other two principles is often challenging in resource-poor and vulnerable smallholder farming systems, thereby increasing the likelihood of yield losses rather than gains. Although farming systems are multifunctional, and environmental and socio-economic factors need to be considered, our analysis indicates that the potential contribution of no-till to the sustainable intensification of agriculture is more limited than often assumed.


Journal of Geophysical Research | 2009

Photochemical degradation of dissolved organic matter and dissolved lignin phenols from the Congo River

Robert G. M. Spencer; Aron Stubbins; Peter J. Hernes; Andy Baker; Kenneth Mopper; Anthony K. Aufdenkampe; Rachael Y. Dyda; Vincent L. Mwamba; Arthur M. Mangangu; Jose N. Wabakanghanzi; Johan Six

[1] Photochemical degradation of Congo River dissolved organic matter (DOM) was investigated to examine the fate of terrigenous DOM derived from tropical ecosystems. Tropical riverine DOM receives greater exposure to solar radiation, particularly in large river plumes discharging directly into the open ocean. Initial Congo River DOM exhibited dissolved organic carbon (DOC) concentration and compositional characteristics typical of organic rich blackwater systems. During a 57 day irradiation experiment, Congo River DOM was shown to be highly photoreactive with a decrease in DOC, chromophoric DOM (CDOM), lignin phenol concentrations (S8) and carbon-normalized yields (L8), equivalent to losses of � 45, 85–95, >95 and >95% of initial values, respectively, and a +3.1 % enrichment of the d 13 C-DOC signature. The loss of L8 and enrichment of d 13 C-DOC during irradiation was strongly correlated (r = 0.99, p < 0.01) indicating tight coupling between these biomarkers. Furthermore, the loss of CDOM absorbance was correlated to the loss of L8 (e.g., a355 versus L8; r = 0.98, p < 0.01) and d 13 C-DOC (e.g., a355 versus d 13 C; r = 0.97, p < 0.01), highlighting the potential of CDOM absorbance measurements for delineating the photochemical degradation of lignin and thus terrigenous DOM. It is apparent that these commonly used measurements for examination of terrigenous DOM in the oceans have a higher rate of photochemical decay than the bulk DOC pool. Further process-based studies are required to determine the selective removal rates of these biomarkers for advancement of our understanding of the fate of this material in the ocean.


Soil Biology & Biochemistry | 2003

Reciprocal transfer of carbon and nitrogen by decomposer fungi at the soil-litter interface

Serita D. Frey; Johan Six; E.T. Elliott

We have investigated whether decomposer fungi translocate litter-derived C into the underlying soil while simultaneously translocating soil-derived inorganic N up into the litter layer. We also located and quantified where the translocated C is deposited within the soil aggregate structure. When 13 C-labeled wheat straw was decomposed on the surface of soil amended with 15 N-labeled inorganic N, we found that C and N were reciprocally transferred by fungi, with a significant quantity (121 –151 m gC g 21 whole soil) of litter-derived C being deposited into newly formed macroaggregates (. 250 mm sized aggregates). Fungal inhibition reduced fungal biomass and the bidirectional C and N flux by approximately 50%. The amount of litter-derived C found in macroaggregates was positively correlated with litter-associated fungal biomass. This fungal-mediated litter-to-soil C transfer, which to our knowledge has not been demonstrated before for saprophytic fungi, may represent an important mechanism by which litter C enters the soil and becomes stabilized as soil organic matter within the macroaggregate structure. q 2003 Elsevier Science Ltd. All rights reserved.


Plant and Soil | 2006

Arbuscular mycorrhizas, microbial communities, nutrient availability, and soil aggregates in organic tomato production

Timothy R. Cavagnaro; Louise E. Jackson; Johan Six; H. Ferris; Sham S. Goyal; D. Asami; Kate M. Scow

Effects of arbuscular mycorrhzal (AM) fungi on plant growth and nutrition are well-known, but their effects on the wider soil biota are less clear. This is in part due to difficulties with establishing appropriate non-mycorrhizal controls in the field. Here we present results of a field experiment using a new approach to overcome this problem. A previously well-characterized mycorrhizal defective tomato mutant (rmc) and its mycorrhizal wildtype progenitor (76R MYC+) were grown at an organic fresh market tomato farm (Yolo County, CA). At the time of planting, root in-growth cores amended with different levels of N and P, were installed between experimental plants to study localized effects of mycorrhizal and non-mycorrhizal tomato roots on soil ecology. Whilst fruit yield and vegetative production of the two genotypes were very similar at harvest, there were large positive effects of colonization of roots by AM fungi on plant nutrient contents, especially P and Zn. The presence of roots colonized by AM fungi also resulted in improved aggregate stability by increasing the fraction of small macroaggregates, but only when N was added. Effects on the wider soil community including nematodes, fungal biomass as indicated by ergosterol, microbial biomass C, and phospholipid fatty acid (PLFA) profiles were less pronounced. Taken together, these data show that AM fungi provide important ecosystem functions in terms of plant nutrition and aggregate stability, but that a change in this one functional group had only a small effect on the wider soil biota. This indicates a high degree of stability in soil communities of this organic farm.


Plant and Soil | 2002

Short-term effects of biological and physical forces on aggregate formation in soils with different clay mineralogy

Karolien Denef; Johan Six; Roel Merckx; Keith Paustian

The mechanisms resulting in the binding of primary soil particles into stable aggregates vary with soil parent material, climate, vegetation, and management practices. In this study, we investigated short-term effects of: (i) nutrient addition (Hoaglands solution), (ii) organic carbon (OC) input (wheat residue), (iii) drying and wetting action, and (iv) root growth, with or without dry–wet cycles, on aggregate formation and stabilization in three soils differing in weathering status and clay mineralogy. These soils included a young, slightly weathered temperate soil dominated by 2:1 (illite and chlorite) clay minerals; a moderately weathered soil with mixed [2:1 (vermiculite) and 1:1 (kaolinite)] clay mineralogy and oxides; and a highly weathered tropical soil dominated by 1:1 (kaolinite) clay minerals and oxides. Air-dried soil was dry sieved through a 250 μm sieve to break up all macroaggregates and 100 g-subsamples were brought to field capacity and incubated for 42 days. After 14 and 42 days, aggregate stability was measured on field moist and air-dried soil, to determine unstable and stable aggregation respectively. In control treatments (i.e., without nutrient or organic matter addition, without roots and at constant moisture), the formation of unstable and stable macroaggregates (> 250 μm) increased in the order: 2:1 clay soil < mixed clay soil < 1:1 clay soil. After 42 days of incubation, nutrient addition significantly increased both unstable and stable macroaggregates in the 2:1 and 1:1 clay soils. In all soils, additional OC input increased both unstable and stable macroaggregate formation. The increase in macroaggregation with OC input was highest for the mixed clay soil and lowest for the 1:1 clay soil. In general, drying and wetting cycles had a positive effect on the formation of macroaggregates. Root growth caused a decrease in unstable macroaggregates in all soils. Larger amounts of macroaggregates were found in the mixed clay and oxides soil when plants were grown under 50% compared to 100% field capacity conditions. We concluded that soils dominated by variable charge clay minerals (1:1 clays and oxides) have higher potential to form stable aggregates when OC concentrations are low. With additional OC inputs, the greatest response in stable macroaggregate formation occurred in soils with mixed mineralogy, which is probably a result of different binding mechanisms occurring: i.e., electrostatic bindings between 2:1 clays, 1:1 clays and oxides (i.e. mineral-mineral bindings), in addition to OM functioning as a binding agent between 2:1 and 1:1 clays.


Ecology | 2008

Experimental warming shows that decomposition temperature sensitivity increases with soil organic matter recalcitrance

Richard T. Conant; J. Megan Steinweg; Michelle L. Haddix; Eldor A. Paul; Alain F. Plante; Johan Six

Soil C decomposition is sensitive to changes in temperature, and even small increases in temperature may prompt large releases of C from soils. But much of what we know about soil C responses to global change is based on short-term incubation data and model output that implicitly assumes soil C pools are composed of organic matter fractions with uniform temperature sensitivities. In contrast, kinetic theory based on chemical reactions suggests that older, more-resistant C fractions may be more temperature sensitive. Recent research on the subject is inconclusive, indicating that the temperature sensitivity of labile soil organic matter (OM) decomposition could either be greater than, less than, or equivalent to that of resistant soil OM. We incubated soils at constant temperature to deplete them of labile soil OM and then successively assessed the CO2-C efflux in response to warming. We found that the decomposition response to experimental warming early during soil incubation (when more labile C remained) was less than that later when labile C was depleted. These results suggest that the temperature sensitivity of resistant soil OM pools is greater than that for labile soil OM and that global change-driven soil C losses may be greater than previously estimated.

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Keith Paustian

Michigan State University

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Juhwan Lee

University of California

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Alain F. Plante

University of Pennsylvania

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Bernard Vanlauwe

International Center for Tropical Agriculture

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Kate M. Scow

University of California

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Steven J. Fonte

Colorado State University

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Roel Merckx

University of California

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