Johanna L. Baily
University of Edinburgh
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Featured researches published by Johanna L. Baily.
Veterinary Record | 2014
Johanna L. Baily; Mark P. Dagleish; Manus Graham; Madaleine Maley; Mara Rocchi
FOLLOWING the recent letter from the AHVLA discussing the emergence of rabbit haemorrhagic disease virus variant strain 2 (RHDV-2) in England (Cornwall, Nottinghamshire, Surrey) and Wales ( VR , March 29, 2014, vol 174, p …
Molecular Ecology | 2015
Johanna L. Baily; Guillaume Méric; Sion Bayliss; Geoffrey Foster; Simon Moss; Eleanor Watson; Ben Pascoe; Jane Mikhail; Romain Pizzi; Robert J. Goldstone; David George Emslie Smith; Kim Willoughby; Ailsa J. Hall; Samuel K. Sheppard; Mark P. Dagleish
Environmental pollution often accompanies the expansion and urbanization of human populations where sewage and wastewaters commonly have an impact on the marine environments. Here, we explored the potential for faecal bacterial pathogens, of anthropic origin, to spread to marine wildlife in coastal areas. The common zoonotic bacterium Campylobacter was isolated from grey seals (Halichoerus grypus), an important sentinel species for environmental pollution, and compared to isolates from wild birds, agricultural sources and clinical samples to characterize possible transmission routes. Campylobacter jejuni was present in half of all grey seal pups sampled (24/50 dead and 46/90 live pups) in the breeding colony on the Isle of May (Scotland), where it was frequently associated with histological evidence of disease. Returning yearling animals (19/19) were negative for C. jejuni suggesting clearance of infection while away from the localized colony infection source. The genomes of 90 isolates from seals were sequenced and characterized using a whole‐genome multilocus sequence typing (MLST) approach and compared to 192 published genomes from multiple sources using population genetic approaches and a probabilistic genetic attribution model to infer the source of infection from MLST data. The strong genotype‐host association has enabled the application of source attribution models in epidemiological studies of human campylobacteriosis, and here assignment analyses consistently grouped seal isolates with those from human clinical samples. These findings are consistent with either a common infection source or direct transmission of human campylobacter to grey seals, raising concerns about the spread of human pathogens to wildlife marine sentinel species in coastal areas.
Journal of Wildlife Diseases | 2015
Geoffrey Foster; Adrian M. Whatmore; Mark P. Dagleish; Johanna L. Baily; Rob Deaville; Nicholas J. Davison; Mark Koylass; Lorraine L. Perrett; Emma Stubberfield; Robert J. Reid; Andrew Brownlow
Abstract Brucella ceti is an emerging zoonotic pathogen that has been recovered from several species of cetaceans in the world’s oceans over the past 20 yr. We report the recovery of B. ceti from a Sowerby’s beaked whale (Mesoploden bidens) and a long-finned pilot whale (Globicehala melas). Recovery from the testis of a long-finned pilot whale provides further evidence of potential for B. ceti infection to impact the reproductive success of cetaceans, many of which are threatened species. The addition of another two cetacean species to the growing number from which B. ceti has been recovered also further emphasizes the concern for human infections with this organism.
Journal of Comparative Pathology | 2010
Mark P. Dagleish; Johanna L. Baily; Geoff Foster; Robert J. Reid; Jason P. Barley
Few diseases have been reported in any species of shark and none in the basking shark (Cetorhinus maximus) despite the latter being the subject of targeted hunting for over two centuries. This is the first report to describe the clinical signs and gross and microscopical pathology in a diseased basking shark that was live-stranded on the east coast of Scotland. Pyogranulomatous meningoencephalitis was present together with multifocal, predominantly non-suppurative, myocarditis with myocyte necrosis, oedema and haemorrhage. Additionally, there was full thickness ulcerative and fibrinonecrotizing dermatitis with underlying granulomatous inflammation. The aetiology could not be determined, but the lesions were suggestive of an infectious process, possibly bacterial.
Environmental Microbiology | 2016
Johanna L. Baily; Geoffrey Foster; Derek J. Brown; Nicholas J. Davison; John E. Coia; Eleanor Watson; Romain Pizzi; Kim Willoughby; Ailsa J. Hall; Mark P. Dagleish
Microbial pollution of the marine environment through land-sea transfer of human and livestock pathogens is of concern. Salmonella was isolated from rectal swabs of free-ranging and stranded grey seal pups (21.1%; 37/175) and compared with strains from the same serovars isolated from human clinical cases, livestock, wild mammals and birds in Scotland, UK to characterize possible transmission routes using pulsed-field gel electrophoresis and multi-locus variable number of tandem repeat analyses. A higher prevalence of Salmonella was found in pups exposed to seawater, suggesting that this may represent a source of this pathogen. Salmonella Bovismorbificans was the most common isolate (18.3% pups; 32/175) and was indistinguishable from isolates found in Scottish cattle. Salmonella Typhimurium was infrequent (2.3% pups; 4/175), mostly similar to isolates found in garden birds and, in one case, identical to a highly multidrug resistant strain isolated from a human child. Salmonella Haifa was rare (1.1% pups; 2/175), but isolates were indistinguishable from that of a human clinical isolate. These results suggest that S. Bovismorbificans may circulate between grey seal and cattle populations and that both S. Typhimurium and S. Haifa isolates are shared with humans, raising concerns of microbial marine pollution.
Journal of Wildlife Diseases | 2013
Geoffrey Foster; Karen Stevenson; Robert J. Reid; Jason P. Barley; Johanna L. Baily; Robert N. Harris; Mark P. Dagleish
We describe the first reported case of mycobacterial infection in a free-ranging pinniped in the Northern Hemisphere. Acid-fast bacteria were demonstrated histologically in the liver of an adult female common seal (Phoca vitulina), and Mycobacterium avium subsp. avium was cultured from the liver.
Diseases of Aquatic Organisms | 2018
Geoffrey Foster; Ingebjørg Helena Nymo; Kit M. Kovacs; Kimberlee B. Beckmen; Andrew Brownlow; Johanna L. Baily; Mark P. Dagleish; Jakub Muchowski; Lorraine L. Perrett; Morten Tryland; Christian Lydersen; Jacques Godfroid; Barry McGovern; Adrian M. Whatmore
Brucella species infecting marine mammals was first reported in 1994 and in the years since has been documented in various species of pinnipeds and cetaceans. While these reports have included species that inhabit Arctic waters, the few available studies on bearded seals Erignathus barbatus have failed to detect Brucella infection to date. We report the first isolation of Brucella pinnipedialis from a bearded seal. The isolate was recovered from the mesenteric lymph node of a bearded seal that stranded in Scotland and typed as ST24, a sequence type associated typically with pinnipeds. Furthermore, serological studies of free-ranging bearded seals in their native waters detected antibodies to Brucella in seals from the Chukchi Sea (1990-2011; 19%) and Svalbard (1995-2007; 8%), whereas no antibodies were detected in bearded seals from the Bering Sea or Bering Strait or from captive bearded seals.
Parasitology | 2017
Caterina Fiegna; Charlotte L. Clarke; Darren Shaw; Johanna L. Baily; Frances C. Clare; Alexandra Gray; Trenton W. J. Garner; Anna Meredith
Outbreaks of cutaneous infectious disease in amphibians are increasingly being attributed to an overlooked group of fungal-like pathogens, the Dermocystids. During the last 10 years on the Isle of Rum, Scotland, palmate newts (Lissotriton helveticus) have been reportedly afflicted by unusual skin lesions. Here we present pathological and molecular findings confirming that the pathogen associated with these lesions is a novel organism of the order Dermocystida, and represents the first formally reported, and potentially lethal, case of amphibian Dermocystid infection in the UK. Whilst the gross pathology and the parasite cyst morphology were synonymous to those described in a study from infected L. helveticus in France, we observed a more extreme clinical outcome on Rum involving severe subcutaneous oedema. Phylogenetic topologies supported synonymy between Dermocystid sequences from Rum and France and as well as their distinction from Amphibiocystidium spp. Phylogenetic analysis also suggested that the amphibian-infecting Dermocystids are not monophyletic. We conclude that the L. helveticus-infecting pathogen represents a single, novel species; Amphibiothecum meredithae.
Environmental Microbiology | 2016
Johanna L. Baily; Geoffrey Foster; Derek J. Brown; Nick Davison; John E. Coia; Eleanor Watson; Romain Pizzi; Kim Willoughby; Ailsa J. Hall; Mark P. Dagleish
Microbial pollution of the marine environment through land-sea transfer of human and livestock pathogens is of concern. Salmonella was isolated from rectal swabs of free-ranging and stranded grey seal pups (21.1%; 37/175) and compared with strains from the same serovars isolated from human clinical cases, livestock, wild mammals and birds in Scotland, UK to characterize possible transmission routes using pulsed-field gel electrophoresis and multi-locus variable number of tandem repeat analyses. A higher prevalence of Salmonella was found in pups exposed to seawater, suggesting that this may represent a source of this pathogen. Salmonella Bovismorbificans was the most common isolate (18.3% pups; 32/175) and was indistinguishable from isolates found in Scottish cattle. Salmonella Typhimurium was infrequent (2.3% pups; 4/175), mostly similar to isolates found in garden birds and, in one case, identical to a highly multidrug resistant strain isolated from a human child. Salmonella Haifa was rare (1.1% pups; 2/175), but isolates were indistinguishable from that of a human clinical isolate. These results suggest that S. Bovismorbificans may circulate between grey seal and cattle populations and that both S. Typhimurium and S. Haifa isolates are shared with humans, raising concerns of microbial marine pollution.
Environmental Microbiology | 2016
Johanna L. Baily; Geoffrey Foster; Derek J. Brown; Nicholas J. Davison; John E. Coia; Eleanor Watson; Romain Pizzi; Kim Willoughby; Ailsa J. Hall; Mark P. Dagleish
Microbial pollution of the marine environment through land-sea transfer of human and livestock pathogens is of concern. Salmonella was isolated from rectal swabs of free-ranging and stranded grey seal pups (21.1%; 37/175) and compared with strains from the same serovars isolated from human clinical cases, livestock, wild mammals and birds in Scotland, UK to characterize possible transmission routes using pulsed-field gel electrophoresis and multi-locus variable number of tandem repeat analyses. A higher prevalence of Salmonella was found in pups exposed to seawater, suggesting that this may represent a source of this pathogen. Salmonella Bovismorbificans was the most common isolate (18.3% pups; 32/175) and was indistinguishable from isolates found in Scottish cattle. Salmonella Typhimurium was infrequent (2.3% pups; 4/175), mostly similar to isolates found in garden birds and, in one case, identical to a highly multidrug resistant strain isolated from a human child. Salmonella Haifa was rare (1.1% pups; 2/175), but isolates were indistinguishable from that of a human clinical isolate. These results suggest that S. Bovismorbificans may circulate between grey seal and cattle populations and that both S. Typhimurium and S. Haifa isolates are shared with humans, raising concerns of microbial marine pollution.