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Dive into the research topics where John A. Brumbaugh is active.

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Featured researches published by John A. Brumbaugh.


Cell | 1977

Transformation of chicken embryo retinal melanoblasts by a temperature-sensitive mutant of rous sarcoma virus

Kate Roby; John A. Brumbaugh; Judy Biehl; Howard Holtzer; David Boettiger

Retinal melanoblasts were transformed by a temperature-sensitive mutant of Rous sarcoma virus (ts-RSV). At the permissive temperature for transformation, the cells cease melanin synthesis, degrade their melanosomes and release much of their accumulated melanin into the medium. At the nonpermissive temperature, the cells assume an epithelioid morphology, actively synthesize melanin and become difficult to distinguish from normal uninfected control cultures. Both the transformed phenotype and the differentiated cell phenotype are temperature-dependent. Infected retinal melanoblasts which are incubated at the nonpermissive temperature and which accumulate a large amount of melanin are unable to transform in response to a temperature shift; instead, the cells degenerate and die. Retinal melanoblasts can be infected by subgroups A, B, C and D of RSV; however, their level of susceptibility to infection is about 1/40 compared to fibroblasts. Cultures infected by ts-RSV produce virus at both temperatures, suggesting that cell phenotype does not regulate virus synthesis.


Clinical Genetics | 2008

Minimal pigment: a new type of oculocutaneous albinism

Richard A. King; Jonathan D. Wirtschafter; David P. Olds; John A. Brumbaugh

Minimal pigment, a new type of oculocutaneous albinism (OCA), is described. At birth, affected individuals had no skin or eye pigment, and white hair and blue irides, but minimal amounts of pigment developed in the iris during the first decade of life. They had no measurable hairbulb tyrosinase activity. A characteristic and unusual pattern of parental activity was found in each of three families studied, with one parent having normal and the other parent having abnormally low tyrosinase activity. The melanocyte ultrastructure was normal and variations in premelanosomal pigmentation correlated with tyrosinase activity. This clinical and biochemical pattern has not been seen in any of the previously described types of OCA. The biochemical defect in minimal pigment OCA is unknown.


Ophthalmology | 1985

Brown Ocuuiocutaneous Albinism: Clinical, Ophthalmological, and Biochemical Characterization

Richard A. King; Richard Alan Lewis; DeWayne Townsend; Alvin S. Zelickson; David P. Olds; John A. Brumbaugh

The clinical, ophthalmological, and biochemical characteristics of a 28-year-old black woman with brown oculocutaneous albinism were determined. Hair color was medium brown and skin color was light brown, and a faint tan developed with sun exposure. The irides were light brown in the central one-third, blue-gray in the peripheral two-thirds, and showed punctate and radial translucency. Visual acuity was 20/60 in the right eye and 20/100 in the left eye. There was a moderate pendular nystagmus, and previous surgeries had corrected an exotropia. The foveal reflex was muted, and the retinal pigment was reduced. Hairbulb tyrosinase activity was 1.75 pmoles/120 min/hairbulb, hairbulb glutathione content 0.83 nmoles/hairbulb, and urine excretion of 5-S-cysteinyldopa 174.9 ng/mg creatinine. Electron microscopy of hairbulb and skin melanocytes showed arrested melanosomal development. These findings suggest that there is a partial block in the distal eumelanin pathway in this form of albinism. The ophthalmological characteristics of six additional cases of this form of albinism are also presented.


Biochimica et Biophysica Acta | 1984

Purification and isoelectric heterogeneity of chicken tyrosinase

Hiroaki Yamamoto; John A. Brumbaugh

Tyrosinase (EC 1.14.18.1) was purified from regenerating chicken feathers. Most of the enzyme activity was in the insoluble fraction, which was solubilized with 0.5% sodium cholate. Solubilized tyrosinase showed multiple forms on isoelectric focusing. The isoelectric points had the following pI values: 5.06, 4.83, 4.68, 4.56, 4.44, 4.32, 4.24, 4.14, 4.06 and 3.97. This tyrosinase fraction was subjected to trypsin (EC 3.4.21.4) cleavage, Sephacryl S-200, hydroxylapatite and DEAE-cellulose chromatography. Purified enzymatically active tyrosinase also showed multiple forms. Their isoelectric points were: 4.23, 4.14, 4.06, 3.99 and 3.91. Each active form had almost the same molecular weight, estimated at 66 000. Staining for 1,2-diol groups of glycoproteins and neuraminidase (EC 3.2.1.18) treatment suggested that chicken tyrosinase is a glycoprotein. The enzyme showed both dopa(L-3,4-dihydroxylphenylalanine) oxidase activity and tyrosine hydroxylase activity.


In Vitro Cellular & Developmental Biology – Plant | 1982

A method for culturing chick melanocytes: The effect of BRL-3A cell conditioning and related additives

Barbara Giss; Jane Antoniou; Gary L. Smith; John A. Brumbaugh

SummaryA method for growing chick embryo melanocytes is described that utilizes medium conditioned by Buffalo Rat liver (BRL-3A) cells. The dissected trunk region of each 72 h (Stages 14 to 19) embryo produces approximately 200,000 melanocytes (purity, 80%) when processed and cultured for 8 d. Thus, a typical experiment involving 20 embryos would produce a total of 4 × 106 melanocytes. Choice of serum, serum concentration, and cell density were determined experimentally. Partially purified multiplication stimulating activity (MSA) from BRL-3A cells and insulin were also tested as medium additives. MSA was not stimulatory, whereas insulin gave a positive response in 2% but not 10 or 0% serum. The final protocol used a modified F12 medium with 10% bovine calf serum conditioned by BRL-3A cells. Cultures were fed every other day. Small colonies of cells became evident by culture Day 3 and increased rapidly to Day 5 when pigmentation became obvious. Colony size continued to increase but more slowly from Days 5 to 8, whereas pigmentation increased rapidly and maximized on Day 8. There is a factor, or factors, present in BRL-3A conditioned medium that stimulates embryonic chick melanocytes to divide preferentially over contaminating cell types. This results in cultures that can provide adequate numbers and purity for biochemical studies.


Forensic Science International | 1997

Multiplex amplification of STR loci with gender alleles using infrared fluorescence detection.

David L. Steffens; Reena Roy; John A. Brumbaugh

The analysis of short tandem repeat (STR) polymorphisms has proven extremely useful for gene mapping, paternity testing, and forensic analysis. Several commercial products are currently available for performing amplification and analysis of STRs. We have adapted Promega Geneprint Systems for use with a high sensitivity infrared (IR) fluorescent automated DNA sequencer. IR-labeled amplification products are generated by including a small quantity of IR-labeled dATP in the reaction. Several Geneprint STR loci can be multiplexed together with the amelogenin sex identification locus in a single amplification reaction. We have successfully amplified up to five Geneprint STR loci together with the amelogenin locus thus improving the throughput of analysis. Purified genomic DNA as well as simulated forensic samples have been utilized for these multiplex amplifications.


Advances in Fluorescence Sensing Technology II | 1995

Two-dimensional infrared fluorescence scanner used for DNA analysis

Lyle Richard Middendorf; Robert C. Bruce; John A. Brumbaugh; Daniel L. Grone; Gi Y. Jang; Peter Richterich; Holges Joachim Hoeltke; Richard J. Williams; Mauro Dr. Peralta

A LI-COR Model 4000 DNA Sequencer has been modified by removing the internal scanning infrared fluorescence microscope and combining it with an external, orthogonal scanner. Due to the reduced background fluorescence and light scattering of nylon membranes in the near- infrared (8000 nm) as compared to the visible region of the optical spectrum, sensitivity of labeled DNA fragments is enhanced. Dot blots of dilution series of labeled oligonucleotides reveal a detection limit of 25 attomole (25 X 10-18 mole). DNA fragments blotted onto nylon membranes using direct transfer electrophoresis in multiplex DNA sequencing can also be detected and subsequently analyzed.


Experimental Cell Research | 1978

Intergenic complementation in chick melanocyte heterokaryons

John A. Brumbaugh; L. Wilkins; D. Schall

Abstract Melanocytes from chick embryos of the pinkeye ( pk pk ) and recessive white ( c c ) genotypes do not produce melanin in cell culture. However, aberrant melanogenic organelles are evident when these cells are examined with the electron microscope. Melanocytes of each genotype, previously grown for 5 days in cell culture, were co-cultured for 24 h and then fused with inactivated Sendai virus. Twenty-four hours after fusion faintly pigmented cells could be seen in the culture dishes. These cells were invariably multinucleated. At 48 h post-fusion many darkly pigmented, multinucleated cells could be seen. Pigment-producing cells were found in four separate experiments and occurred at a frequency of approx. 1 per 40 000 cells treated. Co-culturing of the melanocytes without virus treatment failed to elicit pigment production. When one genotype was labeled with [3H]thymidine prior to fusion, autoradiograms showed that the pigmented cells contained at least one labeled and one unlabeled nucleus. Electron micrographs of the pigmented cells confirmed that cell fusion was complete and showed normal pigment granules with welldefined matrices and deposited melanin. The results show that recessive white and pinkeye can complement as heterokaryons. This indicates that each mutation affects a different melanogenic function and that the expression of the normal function of each does not require nuclear integration. The simplest hypothesis is that the two mutations affect structural genes and that the complementing cytoplasms contain functional gene products. The hypothesis that one or both mutants have altered control functions cannot be ruled out, however.


Experimental Cell Research | 1982

Dopa oxidase expression in fibroblast x melanoma fusions. Extinction in heterokaryons and maintenance in non-dividing cybrids.

M.S. Schwartz; John A. Brumbaugh

Pigmented B-16 mouse melanoma cells were fused with chick embryo fibroblasts or fibroblast cytoplasts and maintained as heterokaryons or non-dividing cybrids, respectively. These single cells were examined ultrastructurally for evidence or pigment gene expression using a cytochemical test for dopa oxidase, the initial enzyme in the conversion of dopa to melanin. Heterokaryons showed significantly less enzyme activity than control cells, whereas non-dividing cybrids showed no significant difference. Therefore, the presence of the intact nuclear membranes in the heterokaryons did not serve as a barrier to the interactions resulting in extinction of differentiated function(s). However, the presence of the fibroblast nucleus was necessary to elicit continued response.


Archive | 1996

STR Typing without DNA Extraction Using an Infrared-Based Non-Radioactive Automated DNA Sequencer

Reena Roy; David L. Steffens; Bill Gartside; Gi Y. Jang; John A. Brumbaugh

A LI-COR Model 4000 automated DNA sequencer using high sensitivity infrared (IR) fluorescence technology was used to detect STR allele patterns from bloodstains and simulated forensic samples using Tth polymerase. Two different amplification strategies were used for labeling. Multiplexing of three primer pairs in a single PCR amplification was accomplished using Taq polymerase. Typing of STR alleles was also achieved using a GenePrint™ STR System (Promega) for various forensic-like specimens. Genotyping of the O allele of the human ABO blood group locus as well as the gender differentiating amelogenin locus was also performed using both strategies. This system combines IR fluorescence chemistry and laser technology thus eliminating the need for radioactivity and the gel handling required with some methodologies. STR alleles are displayed as autoradiogram-like images during the run and can be computer analyzed.

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Lyle Richard Middendorf

University of Nebraska–Lincoln

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Gi Y. Jang

University of Nebraska–Lincoln

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Beth Whitaker

University of Nebraska–Lincoln

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Stephen H. Hughes

National Institutes of Health

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William S. Oetting

University of Nebraska–Lincoln

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Reena Roy

Pennsylvania State University

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