John B. Horne
James Cook University
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Featured researches published by John B. Horne.
Molecular Phylogenetics and Evolution | 2008
John B. Horne; Lynne van Herwerden; J. Howard Choat; D. R. Robertson
We used the mitochondrial control region and a comparative approach to study the genetic population structure of two surgeonfishes, Naso brevirostris and Naso unicornis, across their Indo-central Pacific ranges. Our purpose was to compare our results with those of a previous study of Naso vlamingii [Klanten, S.O., van Herwerden, L., Choat J.H., 2007. Extreme genetic diversity and temporal rather than spatial partitioning in a widely distributed coral reef fish. Mar. Biol. 150, 659-670] another widely distributed Indo-central Pacific Naso species. We found no evidence of a barrier to gene flow between the Indian and Pacific Oceans for either species, consistent with what was shown for N. vlamingii. Overall, both target species lacked spatial population partitions and probably have complex patterns of gene flow on several spatial scales. Despite the lack of geographic population structure distinct clades were observed in N. brevirostris, similar to those found in N. vlamingii. Coalescence times for intraspecific clades of N. brevirostris and N. vlamingii approximate each other, suggesting parallel evolutionary histories. A bimodal mismatch distribution in N. brevirostris indicates that a biogeographic barrier separated N. brevirostris populations sometime during its species history. Naso unicornis, in contrast, lacked genetic structure of any kind, although it has what could represent a single surviving clade. Congruent lack of spatial population structure among all three species suggest that such patterns are not due to stochastic processes of DNA mutation and are most likely driven by ecological and environmental factors.
Molecular Ecology | 2011
John B. Horne; Paolo Momigliano; David J. Welch; Stephen J. Newman; Lynne van Herwerden
The diversity of geographic scales at which marine organisms display genetic variation mirrors the biophysical and ecological complexity of dispersal by pelagic larvae. Yet little is known about the effect of larval ecology on genetic population patterns, partly because detailed data of larval ecology do not yet exist for most taxa. One species for which this data is available is Eleutheronema tetradactylum, a tropical Indo‐West Pacific shorefish. Here, we use a partial sequence mitochondrial cytochrome oxidase subunit 1 (COI) marker and five microsatellite loci to survey the genetic structure of E. tetradactylum across northern Australia. Structure was found throughout the range and isolation by distance was strong, explaining approximately 87 and 64% of the genetic variation in microsatellites and mtDNA, respectively. Populations separated by as little as 15 km also showed significant genetic structure, implying that local populations are mainly insular and self‐seeding on an ecological time frame. Because the larvae of E. tetradactylum have lower swimming performance and poor orientation compared with other tropical fishes, even modest larval abilities may permit self‐recruitment rather than passive dispersal.
Journal of Heredity | 2013
John B. Horne; Lynne van Herwerden; Sheena L. Abellana; Jennifer McIlwain
Much progress has been made toward understanding marine metapopulation dynamics, largely because of multilocus microsatellite surveys able to connect related individuals within the metapopulation. However, most studies are focused on small spatial scales, tens of kilometers, while demographic exchange at larger spatial scales remains poorly documented. Additionally, many small-scale demographic studies conflict with broad-scale phylogeographic patterns concerning levels of marine population connectivity, highlighting a need for data on more intermediate scales. Here, we investigated demographic recruitment processes of a commercially important coral reef fish, the bluespine unicornfish (Naso unicornis) using a suite of mitochondrial DNA (mtDNA) and microsatellite markers. Sampling for this study ranged across the southern Marianas Islands, a linear distance of 250 km and included 386 newly settled postlarval recruits. In contrast with other studies, we report that cohorts of recruits were genetically homogeneous in space and time, with no evidence of temporally stochastic sweepstakes reproduction. The genetic diversity of recruits was high and commensurate with that of the adult population. In addition, there is substantial evidence that 2 recruits, separated by 250 km, were full siblings. This is the largest direct observation of dispersal to date for a coral reef fish. All indications suggest that subpopulations of N. unicornis experience high levels of demographic migrant exchange and metapopulation mixing on a spatial scale of hundreds of kilometers, consistent with high levels of broad-scale genetic connectivity previously reported in this species.
Journal of Evolutionary Biology | 2013
John B. Horne; L. van Herwerden
Phylogeographical studies have shown that some shallow‐water marine organisms, such as certain coral reef fishes, lack spatial population structure at oceanic scales, despite vast distances of pelagic habitat between reefs and other dispersal barriers. However, whether these dispersive widespread taxa constitute long‐term panmictic populations across their species ranges remains unknown. Conventional phylogeographical inferences frequently fail to distinguish between long‐term panmixia and metapopulations connected by gene flow. Moreover, marine organisms have notoriously large effective population sizes that confound population structure detection. Therefore, at what spatial scale marine populations experience independent evolutionary trajectories and ultimately species divergence is still unclear. Here, we present a phylogeographical study of a cosmopolitan Indo‐Pacific coral reef fish Naso hexacanthus and its sister species Naso caesius, using two mtDNA and two nDNA markers. The purpose of this study was two‐fold: first, to test for broad‐scale panmixia in N. hexacanthus by fitting the data to various phylogeographical models within a Bayesian statistical framework, and second, to explore patterns of genetic divergence between the two broadly sympatric species. We report that N. hexacanthus shows little population structure across the Indo‐Pacific and a range‐wide, long‐term panmictic population model best fit the data. Hence, this species presently comprises a single evolutionary unit across much of the tropical Indian and Pacific Oceans. Naso hexacanthus and N. caesius were not reciprocally monophyletic in the mtDNA markers but showed varying degrees of population level divergence in the two nuclear introns. Overall, patterns are consistent with secondary introgression following a period of isolation, which may be attributed to oceanographic conditions of the mid to late Pleistocene, when these two species appear to have diverged.
Ecology and Evolution | 2013
Martin H. van der Meer; John B. Horne; Michael G. Gardner; Jean-Paul A. Hobbs; Morgan S. Pratchett; Lynne van Herwerden
Extensive ongoing degradation of coral reef habitats worldwide has lead to declines in abundance of coral reef fishes and local extinction of some species. Those most vulnerable are ecological specialists and endemic species. Determining connectivity between locations is vital to understanding recovery and long-term persistence of these species following local extinction. This study explored population connectivity in the ecologically-specialized endemic three-striped butterflyfish (Chaetodon tricinctus) using mt and msatDNA (nuclear microsatellites) to distinguish evolutionary versus contemporary gene flow, estimate self-replenishment and measure genetic diversity among locations at the remote Australian offshore coral reefs of Middleton Reef (MR), Elizabeth Reef (ER), Lord Howe Island (LHI), and Norfolk Island (NI). Mt and msatDNA suggested genetic differentiation of the most peripheral location (NI) from the remaining three locations (MR, ER, LHI). Despite high levels of mtDNA gene flow, there is limited msatDNA gene flow with evidence of high levels of self-replenishment (≥76%) at all four locations. Taken together, this suggests prolonged population recovery times following population declines. The peripheral population (NI) is most vulnerable to local extinction due to its relative isolation, extreme levels of self-replenishment (95%), and low contemporary abundance.
Modern & Contemporary France | 2016
John B. Horne
With their latest book, Boulé and Genon make an outstanding contribution to a deeper understanding of the work of Guibert. If Guibert’s photography is the skeleton of their essay, their analysis traces the sophisticated network of relations between photography and writing, showing their mutual bonds and synergies. The two authors also succeed in demonstrating how Guibert problematises the genres, both of photography and of writing, since he first experimented with (auto)fictional representation of the self. The fundamental role of desire and the constant search for the Other in the representation of himself, and himself in the representation of the Other, are also finely investigated by Boulé and Genon. The title itself summarises the core of the book: photographic writing or the mirror of the self. Every person who gets to know Guibert’s work is confronted with the seemingly impossible yet seminal question: was he a writer who photographed or a photographer who wrote? Boulé and Genon undoubtedly provide Guibert’s readers with a significant contribution towards a better understanding of this arduous question.
Marine Ecology Progress Series | 2012
John B. Horne; Paolo Momigliano; David J. Welch; Stephen J. Newman; Lynne van Herwerden
Fisheries Research | 2013
John B. Horne; Paolo Momigliano; Lynne van Herwerden; Stephen J. Newman
Archive | 2010
David J. Welch; Aaron C. Ballagh; Stephen J. Newman; R. J. G. Lester; Bradley R. Moore; L. van Herwerden; John B. Horne; Quentin Allsop; Thor Saunders; Jason Stapley; Neil Gribble
Conservation Genetics Resources | 2010
John B. Horne; Jennifer McIlwain; Lynne van Herwerden