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Dive into the research topics where John D. Allison is active.

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Featured researches published by John D. Allison.


The Journal of Physiology | 2001

A comparison of koniocellular, magnocellular and parvocellular receptive field properties in the lateral geniculate nucleus of the owl monkey (Aotus trivirgatus)

Xiangmin Xu; Jennifer M. Ichida; John D. Allison; Jamie D. Boyd; A. B. Bonds; Vivien A. Casagrande

1 By analogy to previous work on lateral geniculate nucleus (LGN) magnocellular (M) and parvocellular (P) cells our goal was to construct a physiological profile of koniocellular (K) cells that might be linked to particular visual perceptual attributes. 2 Extracellular recordings were used to study LGN cells, or their axons, in silenced primary visual cortex (V1), in nine anaesthetized owl monkeys injected with a neuromuscular blocker. Receptive field centre‐surround organization was examined using flashing spots. Spatial and temporal tuning and contrast responses were examined using drifting sine‐wave gratings; counterphase sine‐wave gratings were used to examine linearity of spatial summation. 3 Receptive fields of 133 LGN cells and 10 LGN afferent axons were analysed at eccentricities ranging from 2.8 to 31.3 deg. Thirty‐four per cent of K cells and only 9 % of P and 6 % of M cells responded poorly to drifting gratings. K, P and M cells showed increases in centre size with eccentricity, but K cells showed more scatter. All cells, except one M cell, showed linearity in spatial summation. 4 At matched eccentricities, K cells exhibited lower spatial and intermediate temporal resolution compared with P and M cells. K contrast thresholds and gains were more similar to those of M than P cells. M cells showed lower spatial and higher temporal resolution and contrast gains than P cells. 5 K cells in different K LGN layers differed in spatial, temporal and contrast characteristics, with K3 cells having higher spatial resolution and lower temporal resolution than K1/K2 cells. 6 Taken together with previous results these findings suggest that the K cells consist of several classes, some of which could contribute to conventional aspects of spatial and temporal resolution.


Neurobiology of Aging | 2007

Impaired spatial memory in APP-overexpressing mice on a homocysteinemia-inducing diet.

Alexandra Bernardo; Meghan McCord; Aron M. Troen; John D. Allison; Michael P. McDonald

Consumption of a diet that significantly elevates homocysteine (homocysteinemia) induces cell death in the CA3 hippocampal subfield in amyloid precursor protein (APP) over-expressing transgenic mice but not in wild-type controls. We assessed behavioral and other neuropathological effects of a homocysteinemia-inducing diet in aged APP-overexpressing mice. Starting at 16-18 months of age, mice were fed either a treatment diet lacking folate, choline, and methionine, and supplemented with homocysteine, or a control diet containing normal amounts of folate, choline and methionine but no homocysteine. After 5 months on the experimental diets, performance on a delayed non-matching-to-position working-memory task was unimpaired. In contrast, spatial reference memory in the water maze was impaired in transgenic mice on the treatment diet. Transgenic mice had higher homocysteine levels than wild-type mice even when fed the control diet, suggesting an effect of genotype on homocysteine metabolism. Methyl-donor deficiency did not alter amyloid deposition in the transgenic mice. These results suggest that disrupted homocysteine metabolism may induce Abeta-associated memory impairments and neurodegeneration in APP overexpressing mice.


The Journal of Neuroscience | 2003

Cooperation between Area 17 Neuron Pairs Enhances Fine Discrimination of Orientation

Jason M. Samonds; John D. Allison; Heather A. Brown; A. B. Bonds

We examined 66 complex cells in area 17 of cats that were paralyzed and anesthetized with propofol and N2O. We studied changes in ensemble responses for small (<10°) and large (>10°) differences in orientation. Examination of temporal resolution and discharge history revealed advantages in discrimination from both dependent (e.g., synchronization) and independent (e.g., bursting) interspike interval properties. For 27 pairs of neurons, we found that the average cooperation (the advantage gained from the joint activity) was 57.6% for fine discrimination of orientation but <5% for gross discrimination. Dependency (probabilistic quantification of the interaction between the cells) was measured between 29 pairs of neurons while varying orientation. On average, the dependency tuning for orientation was 35.5% narrower than the average firing rate tuning. The changes in dependency around the peak orientation (at which the firing rate remains relatively constant) lead to substantial cooperation that can improve discrimination in this region. The narrow tuning of dependency and the cooperation provide evidence to support a population-encoding scheme that is based on biologically plausible mechanisms and that could account for hyperacuities.


Visual Neuroscience | 2000

Differential contributions of magnocellular and parvocellular pathways to the contrast response of neurons in bush baby primary visual cortex (V1)

John D. Allison; Peter Melzer; Yuchuan Ding; A. B. Bonds; Vivien A. Casagrande

How neurons in the primary visual cortex (V1) of primates process parallel inputs from the magnocellular (M) and parvocellular (P) layers of the lateral geniculate nucleus (LGN) is not completely understood. To investigate whether signals from the two pathways are integrated in the cortex, we recorded contrast-response functions (CRFs) from 20 bush baby V1 neurons before, during, and after pharmacologically inactivating neural activity in either the contralateral LGN M or P layers. Inactivating the M layer reduced the responses of V1 neurons (n = 10) to all stimulus contrasts and significantly elevated (t = 8.15, P < 0.01) their average contrast threshold from 8.04 (+/- 4.1)% contrast to 22.46 (+/- 6.28)% contrast. M layer inactivation also significantly reduced (t = 4.06, P < 0.01) the average peak response amplitude. Inactivating the P layer did not elevate the average contrast threshold of V1 neurons (n = 10), but significantly reduced (t = 4.34, P < 0.01) their average peak response amplitude. These data demonstrate that input from the M pathway can account for the responses of V1 neurons to low stimulus contrasts and also contributes to responses to high stimulus contrasts. The P pathway appears to influence mainly the responses of V1 neurons to high stimulus contrasts. None of the cells in our sample, which included cells in all output layers of V1, appeared to receive input from only one pathway. These findings support the view that many V1 neurons integrate information about stimulus contrast carried by the LGN M and P pathways.


Visual Neuroscience | 2003

Nonlocal origin of response suppression from stimulation outside the classic receptive field in area 17 of the cat

Heather A. Brown; John D. Allison; Jason M. Samonds; A. B. Bonds

A stimulus located outside the classic receptive field (CRF) of a striate cortical neuron can markedly influence its behavior. To study this phenomenon, we recorded from two cortical sites, recorded and peripheral, with separate electrodes in cats anesthetized with Propofol and nitrous oxide. The receptive fields of each site were discrete (2-7.3 deg between centers). A control orientation tuning (OT) curve was measured for a single recorded cell with a drifting grating. The OT curve was then remeasured while stimulating simultaneously the cells CRF as well as the peripheral site with a stimulus optimized for that location. For 22/60 cells, the peripheral stimulus suppressed the peak response and/or shifted the center of mass of the OT curve. For 19 of these 22 cells, we then reversibly blocked stimulus-driven activity at the peripheral site by iontophoretic application of GABA (0.5 M). For 6/19 cells, the response returned to control levels, implying that for these cells the inhibitory influence arose from the blocked site. The responses of nine cells remained reduced during inactivation of the peripheral site, suggesting that influence was generated outside the region of local block in area 17. This is consistent with earlier findings suggesting that modulatory influences can originate from higher cortical areas. Three cells had mixed results, suggesting multiple origins of influence. The response of each cell returned to suppressed levels after dissipation of the GABA and returned to baseline values when the peripheral stimulus was removed. These findings support a cortical model in which a cells response is modulated by an inhibitory network originating from beyond the receptive field that supplants convergence of excitatory lateral geniculate neurons. The existence of cells that exhibit no change in peripherally inhibited responses during the GABA application suggests that peripheral influences may arise from outside area 17, presumably from other cortical areas (e.g. area 18).


Visual Neuroscience | 1993

Contrast adaptation in striate cortical neurons of the nocturnal primate bush baby ( Galago crassicaudatus)

John D. Allison; Vivien A. Casagrande; Edward J. Debruyn; A. B. Bonds

It has been argued that in order for the visual system to detect edges accurately under a range of conditions, the visual system needs to adapt to the local contrast level to preserve sensitivity (Blakemore & Campbell, 1969). Cells in the primary visual cortex of cats adapt to stimuli with low to moderate contrast. Curiously, macaque monkey neurons in primary visual cortex (V1) do not show evidence for similar adaptation. To address the question of whether this differential sensitivity in contrast adaptation might be due to phylogenetic variation between cats and primates or to specializations for visual niche (e.g. nocturnal vs. diurnal), contrast adaptation to temporally and spatially optimized gratings was examined in 30 V1 cells of three nocturnal primate bush babies (Galago crassicaudatus). A second objective was to examine the relationship between the degree of contrast adaptation and cell classification or cell location relative to cortical layers or compartments [i.e. cytochrome-oxidase (CO) blobs and interblobs]. All cells were classified (simple vs. complex) and anatomically localized relative to cortical layers and cytochrome-oxidase (CO) blob and interblob compartments. Two independent measures of contrast adaptation were used. In the first test, contrast was sequentially increased from 3-56% and then decreased. The contrast required to maintain a half-maximum response amplitude in the 30 cells tested increased an average of 0.24 (+/- 0.12) log units during the sequential decrements in contrast. For the second test, four sets of five interleaved contrasts within +/- 1 octave of a central adapting contrast (10%, 14%, 20%, and 28%, respectively) were presented. The cells produced a mean adaptation index of 0.57 (+/- 0.47) which is very similar to that exhibited by cat cortical neurons (0.54 +/- 0.41). Interestingly, cells in interblobs showed a trend toward greater adaptation than did blob cells. Moreover, cells in the supragranular layers exhibited greater adaptation than cells in the infragranular layers. No significant differences in adaptation were found to correlate with other cell classification indices. Taken together, our results suggest that contrast adaptation may be more important for maintaining sensitivity in nocturnal species (primates or cats) than in diurnal species (macaque monkeys), and that in the nocturnal bush baby, cells in cortical layers and compartments may be differentially specialized for contrast adaptation.


Frontiers in Behavioral Neuroscience | 2015

A novel behavioral paradigm to assess multisensory processing in mice

Justin K. Siemann; Christopher L. Muller; Gary Bamberger; John D. Allison; Jeremy Veenstra-VanderWeele; Mark T. Wallace

Human psychophysical and animal behavioral studies have illustrated the benefits that can be conferred from having information available from multiple senses. Given the central role of multisensory integration for perceptual and cognitive function, it is important to design behavioral paradigms for animal models to provide mechanistic insights into the neural bases of these multisensory processes. Prior studies have focused on large mammals, yet the mouse offers a host of advantages, most importantly the wealth of available genetic manipulations relevant to human disease. To begin to employ this model species for multisensory research it is necessary to first establish and validate a robust behavioral assay for the mouse. Two common mouse strains (C57BL/6J and 129S6/SvEv) were first trained to respond to unisensory (visual and auditory) stimuli separately. Once trained, performance with paired audiovisual stimuli was then examined with a focus on response accuracy and behavioral gain. Stimulus durations varied from 50 ms to 1 s in order to modulate the effectiveness of the stimuli and to determine if the well-established “principle of inverse effectiveness” held in this model. Response accuracy in the multisensory condition was greater than for either unisensory condition for all stimulus durations, with significant gains observed at the 300 ms and 100 ms durations. Main effects of stimulus duration, stimulus modality and a significant interaction between these factors were observed. The greatest behavioral gain was seen for the 100 ms duration condition, with a trend observed that as the stimuli became less effective, larger behavioral gains were observed upon their pairing (i.e., inverse effectiveness). These results are the first to validate the mouse as a species that shows demonstrable behavioral facilitations under multisensory conditions and provides a platform for future mechanistically directed studies to examine the neural bases of multisensory integration.


Journal of Vision | 2010

Spike train analysis reveals cooperation between Area 17 neuron pairs that enhances fine discrimination of orientation

Jason M. Samonds; John D. Allison; Heather A. Brown; A. B. Bonds

We recorded from 22 pairs of neurons neurons in cats anesthetized with Propofol and N2O and paralyzed with Pavulon following established guidelines. We used type analysis (Johnson et al., 2001) to calculate the Resistor Average Kullback-Leibler distance between ensemble responses to fine ( 10deg, >0.1c/deg) variations of OR and SF from the optimal parameter (see panel below). This “distance” provides an estimate of the reduction in classification error between responses (i.e., reduction in error = 2-distance). Discharge history was incorporated into types by testing for a stable Markov order (i.e., where discharge history ceases to contribute) using conditional types on previous bins for distance calculations. PURPOSE Bursting in Area 17 is tuned more sharply than spike rate for orientation (OR) and spatial frequency (SF) (Cattaneo et al., 1981a,b). Burst length is reduced at non-optimal orientations (DeBusk et al., 1997) and leads to less efficient synaptic coupling (Snider et al., 1998). We describe how these interspike interval (ISI) properties could contribute to discriminations between spike trains for fine and gross differences in OR and SF. We also describe changes in neural dependency as a function of OR, SF, contrast, and time to demonstrate how cooperative information (synergy) arises and is transmitted.


Visual Neuroscience | 2001

Temporal-frequency tuning of cross-orientation suppression in the cat striate cortex.

John D. Allison; Kevin R. Smith; A. B. Bonds


Proceedings of the National Academy of Sciences of the United States of America | 2004

Cooperative synchronized assemblies enhance orientation discrimination

Jason M. Samonds; John D. Allison; Heather A. Brown; A. B. Bonds

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Xiangmin Xu

University of California

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