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Dive into the research topics where John D. Downie is active.

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Featured researches published by John D. Downie.


Optics Letters | 1999

MULTILAYER VOLUME HOLOGRAPHIC OPTICAL MEMORY

Vladimir Markov; James E. Millerd; James Trolinger; Mark Norrie; John D. Downie; Dogan A. Timucin

We demonstrate a scheme for volume holographic storage based on the features of shift selectivity of a speckle reference-wave hologram. The proposed recording method permits more-efficient use of the recording medium and yields greater storage density than spherical or plane-wave reference beams. Experimental results of multiple hologram storage and replay in a photorefractive crystal of iron-doped lithium niobate are presented. The mechanisms of lateral and longitudinal shift selectivity are described theoretically and shown to agree with experimental measurements.


Optics Letters | 1998

Long holographic lifetimes in bacteriorhodopsin films

John D. Downie; Doǧan A. Timuçin; Daniel Tod Smithey; Marshall David Crew

The D85N genetic variant of bacteriorhodopsin (BR) displays a nearly permanent lifetime of the photochromic P(490) state. We present pump-probe measurements that demonstrate this behavior. However, diffraction efficiency measurements made from holograms recorded in a hydrated D85N film show markedly different decay behavior, suggesting that a molecular diffusion process is occurring in the film. Holograms recorded with different grating frequencies display correspondingly different decay times, thus supporting this hypothesis. A thin D85N film was fabricated that was chemically cross linked, resulting in the elimination of diffusion of BR molecules within the polymer matrix. This film exhibits a grating lifetime of the order of weeks or more, thus permitting the long-term holographic storage of information.


Applied Optics | 1994

Real-time holographic image correction using bacteriorhodopsin

John D. Downie

We present experimental results of one-way coherent imaging through a thin phase-aberrating medium using a holographic technique with bacteriorhodopsin as a real-time holographic material. Bacteriorhodopsin is well suited for the application when the aberration is time varying because of its real-time writing and erasing characteristics, sensitivity, and spatial resolution. We show results with final image resolution of greater than 20 line pairs/mm and high signal-to-noise ratio using a polarizationholcgraphy approach.


Applied Optics | 1989

Optimal wavefront control for adaptive segmented mirrors

John D. Downie; Joseph W. Goodman

A ground-based astronomical telescope with a segmented primary mirror will suffer image-degrading wavefront aberrations from at least two sources: (1) atmospheric turbulence and (2) segment misalignment or figure errors of the mirror itself. This paper describes the derivation of a mirror control feedback matrix that assumes the presence of both types of aberration and is optimum in the sense that it minimizes the meansquared residual wavefront error. Assumptions of the statistical nature of the wavefront measurement errors, atmospheric phase aberrations, and segment misalignment errors are made in the process of derivation. Examples of the degree of correction are presented for three different types of wavefront measurement data and compared to results of simple corrections.


Applied Optics | 1998

Modeling the grating-formation process in thick bacteriorhodopsin films.

John D. Downie; Doǧan A. Timuçin

We model the grating-formation process in bacteriorhodopsin films for the interference of two plane waves. We simulate the temporal dependence of grating recording and readout, and we examine the behavior of the diffraction efficiency with respect to exposure, write and read wavelengths, and film parameters such as initial optical density and lifetime of the upper state. Gratings written in thick bacteriorhodopsin films are generally nonuniform and nonsinusoidal owing to the absorption and saturation properties of the material. The simulations also show that one can often obtain optimization of hologram recording and readout by writing and reading at wavelengths far off the peak of the ground-state absorbance spectrum, especially for films with high values of the peak optical density.


Applied Optics | 1992

Effects and correction of magneto-optic spatial light modulator phase errors in an optical correlator

John D. Downie; Butler Hine; Max B. Reid

Here we study the optical phase errors introduced into an optical correlator by the input and filter plane magneto-optic spatial light modulators. We measure and characterize the magnitude of these phase errors, evaluate their effects on the correlation results, and present a means of correction by a design modification of the binary phase-only optical-filter function. The efficacy of the phase-correction technique is quantified and is found to restore the correlation characteristics to those obtained in the absence of errors, to a high degree. The phase errors of other correlator system elements are also discussed and treated in a similar fashion.


Applied Optics | 1995

Application of Bacteriorhodopsin Films in an Adaptive-Focusing Schlieren System

John D. Downie

The photochromic property of bacteriorhodopsin films is exploited in the application of a focusing schlieren optical system for the visualization of optical phase information. By encoding an image on the film with light of one wavelength and reading out with a different wavelength, the readout beam can effectively see the photographic negative of the original image. The potential advantage of this system over previous focusing schlieren systems is that the updatable nature of the bacteriorhodopsin film allows system adaptation. I discuss two image encoding and readout techniques for the bacteriorhodopsin and use film transmission characteristics to choose the more appropriate method. I demonstrate the system principle with experimental results using argon-ion and He-Cd lasers as the two light sources of different wavelengths, and I discuss current limitations to implementation with a white-light source.


Optics Letters | 1991

Design of optimal binary phase and amplitude filters for maximization of correlation peak sharpness.

John D. Downie

Current binary phase filters used for optical correlation are usually assumed to have uniform amplitude transmission. Here a new type of filter is studied, the binary phase and amplitude filter. If binary phase values of 0 and pi are assumed, the amplitude transmittance values of this type of filter may be optimized to maximize the peak sharpness. For a polarization-encoded binary phase filter this can be translated into optimization of the rotation angle of the output polarizer following the filter spatial light modulator. An analytic expression is presented for the optimum polarizer angle and thus for the optimum binary phase and amplitude filter design.


Applied Optics | 1995

Nonlinear coherent optical image processing using logarithmic transmittance of bacteriorhodopsin films

John D. Downie

The transmission properties of some bacteriorhodopsin-film spatial light modulators are uniquely suited to allow nonlinear optical image-processing operations to be applied to images with multiplicative noise characteristics. A logarithmic amplitude-transmission characteristic of the film permits the conversion of multiplicative noise to additive noise, which may then be linearly filtered out in the Fourier plane of the transformed image. I present experimental results demonstrating the principle and the capability for several different image and noise situations, including deterministic noise and speckle. The bacteriorhodopsin film studied here displays the logarithmic transmission response for write intensities spanning a dynamic range greater than 2 orders of magnitude.


Optics Letters | 1996

Red-shifted photochromic behavior of a bacteriorhodopsin film made from the L93T genetic variant

John D. Downie; Daniel Tod Smithey

We present experimental results demonstrating the red-shifted photochromic behavior of a gelatin film made from L93T, a genetic variant of bacteriorhodopsin. The red shift of the absorbance spectrum on illumination with visible light is due to a short M-state lifetime and a longer-lived O state whose absorption peaks at 610 nm. Pump-probe measurements show the O state to have a lifetime of approximately 2.2 s in the gelatin film, with a single exponential decay behavior. We also present holographic kinetic results for both red (633-nm) and blue (442-nm) readout wavelengths.

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Robert R. Birge

University of Connecticut

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