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Featured researches published by John E. Murphy.


Blood | 2010

Rational design of a fully active, long-acting PEGylated factor VIII for hemophilia A treatment

Baisong Mei; Clark Pan; Haiyan Jiang; Hendri Tjandra; Jonathan S. Strauss; Yaoqi Chen; Tongyao Liu; Xin Zhang; Joanne Severs; Jim Newgren; Jianmin Chen; Jian-Ming Gu; Babu Subramanyam; Michael A. Fournel; Glenn F. Pierce; John E. Murphy

A long-acting factor VIII (FVIII) as a replacement therapy for hemophilia A would significantly improve treatment options for patients with hemophilia A. To develop a FVIII with an extended circulating half-life, but without a reduction in activity, we have engineered 23 FVIII variants with introduced surface-exposed cysteines to which a polyethylene glycol (PEG) polymer was specifically conjugated. Screening of variant expression level, PEGylation yield, and functional assay identified several conjugates retaining full in vitro coagulation activity and von Willebrand factor (VWF) binding.PEGylated FVIII variants exhibited improved pharmacokinetics in hemophilic mice and rabbits. In addition, pharmacokinetic studies in VWF knockout mice indicated that larger molecular weight PEG may substitute for VWF in protecting PEGylated FVIII from clearance in vivo. In bleeding models of hemophilic mice, PEGylated FVIII not only exhibited prolonged efficacy that is consistent with the improved pharmacokinetics but also showed efficacy in stopping acute bleeds comparable with that of unmodified rFVIII. In summary site-specifically PEGylated FVIII has the potential to be a long-acting prophylactic treatment while being fully efficacious for on-demand treatment for patients with hemophilia A.


Proceedings of the National Academy of Sciences of the United States of America | 2007

Developmental and adult phenotyping directly from mutant embryonic stem cells

Sophia George; Marina Gertsenstein; Kristina Vintersten; Ella Korets-Smith; John E. Murphy; Mary E. Stevens; Jody J. Haigh; Andras Nagy

Tetraploid embryo complementation assay has shown that mouse ES cells alone are capable of supporting embryonic development and adult life of mice. Newly established F1 hybrid ES cells allow the production of ES cell-derived animals at a high enough efficiency to directly make ES cell-based genetics feasible. Here we report the establishment and characterization of 12 new F1 hybrid ES cell lines and the use of one of the best (G4) in a gain- and loss-of-function genetic study, where the in vivo phenotypes were assessed directly from ES cell-derived embryos. We found the generation of G4 ES cell-derived animals to be very efficient. Furthermore, even after two consecutive rounds of genetic modifications, the majority of transgenic lines retained the original potential of the parental lines; with 10–40% of chimeras producing ES cell-derived animals/embryos. Using these genetically altered ES cells, this success rate, in most cases, permitted the derivation of a sufficient number of mutants for initial phenotypic analyses only a few weeks after the establishment of the cell lines. Although the experimental design has to take into account a moderate level of uncontrolled damage on ES cell lines, our proof-of-principle experiment provides useful data to assist future designs harnessing the power of this technology to accelerate our understanding of gene function.


Journal of Biotechnology | 2008

Cell surface staining of recombinant factor VIII is reduced in apoptosis resistant BHK-21 cells

Adiba Ishaque; John Thrift; John E. Murphy; Konstantin Konstantinov

We have recently demonstrated an increase in recombinant factor VIII (rFVIII) secretion from BHK-21 cells (rBHK-21(host)) following an over-expression of the chaperone protein heat shock protein 70 (Hsp70) (rBHK-21(Hsp70)) due to an inhibition of apoptotic cell death and an increased cellular expression of rFVIII [Ishaque, A., Thrift, J., Murphy, J.E., Konstantin, K., 2007. Over-expression of Hsp70 in BHK-21 cells engineered to produce recombinant factor VIII promotes resistance to apoptosis and enhances secretion. Biotechnol. Bioeng. Biotech. Bioeng. 97, 144-155]. In the present study we investigated the difference in adherence of rFVIII to the cell membrane surface by comparing changes in cell viability and extent of phosphatidylersine (PS) exposure in apoptosis between rBHK-21(host), rBHK-21(Hsp70), and parental BHK-21 cells devoid of rFVIII expression (BHK-21(native)) during batch cell culture experiments. The Zenon technique was used to double stain for cell surface and intracellular rFVIII using flow cytometric Guava PCA analysis. By this quantitative analysis intracellular rFVIII was shown to decrease in rBHK-21(host) cells as the cell viability declined while the rFVIII cell surface staining increased. Conversely, rBHK-21(Hsp70) cell cultures displayed higher cell viability and intracellular rFVIII with less cell surface rFVIII staining. Time dependent increases of rFVIII adherence to the surface of rBHK-21(host) cells and its reduction on the surface of rBHK-21(Hsp70) cells was also confirmed by fluorescence microscopy. Furthermore, greater rFVIII cell surface staining correlated with an increase in detectable PS exposure on the surface of BHK-21(native) batch cell cultures. However, PS exposure could not be identified to the same extent on rBHK-21(host) cells despite a similar decline in cell viability between rBHK-21(host) and BHK-21(native) batch cultures. Any exposed PS on rBHK-21(host) cells was most likely masked by secreted rFVIII, mimicking the effect on activated platelets where the externalization of PS also occurs, and serves as a ligand for FVIII activation in the blood coagulation cascade. Taken together we have identified that rFVIII sequestration on the membrane surface is another potential limitation to rFVIII productivity and one which can also be alleviated by reduction of apoptosis in a clone expressing human HSP70.


Molecular Biotechnology | 2010

Lectin Binding Assays for In-Process Monitoring of Sialylation in Protein Production

Weiduan Xu; Jianmin Chen; Glenn Yamasaki; John E. Murphy; Baisong Mei

Many therapeutic proteins require appropriate glycosylation for their biological activities and plasma half life. Coagulation factor VIII (FVIII) is a glycoprotein which has extensive post-translational modification by N-linked glycosylation. The terminal sialic acid in the N-linked glycans of FVIII is required for maximal circulatory half life. The extent of FVIII sialylation can be determined by high pH anion-exchange chromatography coupled with a pulse electrochemical detector (HPAEC-PED), but this requires a large amount of purified protein. Using FVIII as a model, the objective of the present study was to develop assays that enable detection and prediction of sialylation deficiency at an early stage in the process and thus prevent downstream product quality excursions. Lectin ECA (Erythrina Cristagalli) binds to unsialylated Galβ1-4 GlcNAc and the ECA-binding level (i.e., terminal Gal(β1-4) exposure) is inversely proportional to the level of sialylation. By using ECA, a cell-based assay was developed to measure the global sialylation profile in FVIII producing cells. To examine the Galβ1-4 exposure on the FVIII molecule in bioreactor tissue culture fluid (TCF), an ELISA-based ECA-FVIII binding assay was developed. The ECA-binding specificity in both assays was assessed by ECA-specific sugar inhibitors and neuraminidase digestion. The ECA-binding specificity was also independently confirmed by a ST3GAL4 siRNA knockdown experiment. To establish the correlation between Galβ1-4 exposure and the HPAEC-PED determined FVIII sialylation value, the FVIII containing bioreactor TCF and the purified FVIII samples were tested with ECA ELISA binding assay. The results indicated an inverse correlation between ECA binding and the corresponding HPAEC-PED sialylation value. The ECA-binding assays are cost effective and can be rapidly performed, thereby making them effective for in-process monitoring of protein sialylation.


Proceedings of the National Academy of Sciences of the United States of America | 1998

A combinatorial approach to the discovery of efficient cationic peptoid reagents for gene delivery

John E. Murphy; Tetsuo Uno; Janice D. Hamer; Fred E. Cohen; Varavani Dwarki; Ronald N. Zuckermann


Proceedings of the National Academy of Sciences of the United States of America | 1997

Long-term correction of obesity and diabetes in genetically obese mice by a single intramuscular injection of recombinant adeno-associated virus encoding mouse leptin

John E. Murphy; Shangzhen Zhou; Klaus Giese; Lewis T. Williams; Jaime Escobedo; Varavani Dwarki


Biotechnology and Bioengineering | 2007

Anti‐apoptotic genes Aven and E1B‐19K enhance performance of BHK cells engineered to express recombinant factor VIII in batch and low perfusion cell culture

Toey Nivitchanyong; Amanda Martinez; Adiba Ishaque; John E. Murphy; Konstantin Konstantinov; Michael J. Betenbaugh; John Thrift


Biotechnology and Bioengineering | 2007

Over-expression of Hsp70 in BHK-21 cells engineered to produce recombinant factor VIII promotes resistance to apoptosis and enhances secretion.

Adiba Ishaque; John Thrift; John E. Murphy; Konstantin Konstantinov


Archive | 1998

Lipid-polyamide conjugates and compositions for nucleic acid delivery

Ronald N. Zuckermann; Carol Huang; John E. Murphy; Tetsuo Uno


Archive | 2007

APPLICATION OF ANTI-APOPTOTIC GENES IN MAMMALIAN CELLS FOR PERFUSION CULTURE.

Michael J. Betenbaugh; John E. Murphy; Konstantin Konstantinov; John Thrift; Tarangsri Nivitchanyong

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Baisong Mei

University of California

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Clark Pan

University of California

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Tetsuo Uno

Genomics Institute of the Novartis Research Foundation

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Ronald N. Zuckermann

Lawrence Berkeley National Laboratory

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