John Paul Schmit

Fungal biodiversity in aquatic habitats

Fungal biodiversity in freshwater, brackish and marine habitats was estimated based on reports in the literature. The taxonomic groups treated were those with species commonly found on submerged substrates in aquatic habitats: Ascomycetes (exclusive of yeasts), Basidiomycetes, Chytridiomycetes, and the non-fungal Saprolegniales in the Class Oomycetes. Based on presence/absence data for a large number and variety of aquatic habitats, about 3,000 fungal species and 138 saprolegnialean species have been reported from aquatic habitats. The greatest number of taxa comprise the Ascomycetes, including mitosporic taxa, and Chytridiomycetes. Taxa of Basidiomycetes are, for the most part, excluded from aquatic habitats. The greatest biodiversity for all groups occurs in temperate areas, followed by Asian tropical areas. This pattern may be an artifact of the location of most of the sampling effort. The least sampled geographic areas include Africa, Australia, China, South America and boreal and tropical regions worldwide. Some species overlap occurs among terrestrial and freshwater taxa but little species overlap occurs among freshwater and marine taxa. We predict that many species remain to be discovered in aquatic habitats given the few taxonomic specialists studying these fungi, the few substrate types studied intensively, and the vast geographical area not yet sampled.

An estimate of the lower limit of global fungal diversity

We conservatively estimate that there is a minimum of 712,000 extant fungal species worldwide, but we recognize that the actual species richness is likely much higher. This estimate was calculated from the ratio of fungal species to plant species for various ecologically defined groups of fungi in well-studied regions, along with data on each groups’ level of endemism. These calculations were based on information presented in the detailed treatments of the various fungal groups published in this special issue. Our intention was to establish a lower boundary for the number of fungal species worldwide that can be revised upward as more information becomes available. Establishing a lower boundary for fungal diversity is important as current estimates vary widely, hindering the ability to include fungi in discussions of ecology, biodiversity and conservation. Problems inherent in making these estimates, and the impact that additional data on fungal and plant species diversity will have on these estimates are discussed.

Fungal biodiversity: what do we know? What can we predict?

Although fungi are among the most important organisms in the world, only limited and incomplete information is currently available for most species and current estimates of species numbers for fungi differ significantly. This lack of basic information on taxonomic diversity has significant implications for many aspects of evolutionary biology. While the figure of 1.5 million estimated fungal species is commonly used, critics have questioned the validity of this estimate. Data on biogeographic distributions, levels of endemism, and host specificity must be taken into account when developing estimates of global fungal diversity. This paper introduces a set of papers that attempt to develop a rigorous, minimum estimate of global fungal diversity based on a critical assessment of current species lists and informed predictions of missing data and levels of endemism. As such, these papers represent both a meta-analysis of current data and a gap assessment to indicate where future research efforts should be concentrated.

Global diversity and distribution of macrofungi

Data on macrofungal diversity and distribution patterns were compiled for major geographical regions of the world. Macrofungi are defined here to include ascomycetes and basidiomycetes with large, easily observed spore-bearing structures that form above or below ground. Each coauthor either provided data on a particular taxonomic group of macrofungi or information on the macrofungi of a specific geographic area. We then employed a meta-analysis to investigate species overlaps between areas, levels of endemism, centers of diversity, and estimated percent of species known for each taxonomic group for each geographic area and for the combined macrofungal data set. Thus, the study provides both a meta-analysis of current data and a gap assessment to help identify research needs. In all, 21,679 names of macrofungi were compiled. The percentage of unique names for each region ranged from 37% for temperate Asia to 72% for Australasia. Approximately 35,000 macrofungal species were estimated to be “unknown” by the contributing authors. This would give an estimated total of 56,679 macrofungi. Our compiled species list does not include data from most of S.E. Europe, Africa, western Asia, or tropical eastern Asia. Even so, combining our list of names with the estimates from contributing authors is in line with our calculated estimate of between 53,000 and 110,000 macrofungal species derived using plant/macrofungal species ratio data. The estimates developed in this study are consistent with a hypothesis of high overall fungal species diversity.

Geographic and host distribution of lignicolous mangrove microfungi

Abstract We examined factors that contribute to the structuring of lignicolous mangrove microfungal communities across ocean basins and plant families. In particular, we hypothesized that microfungal communities are more similar between locations in the same ocean basin as compared to locations in different ocean basins, and that trees that are more closely related phylogenetically share more similar microfungal communities than those less closely related. We assessed these hypotheses through a meta-analysis employing ordination analysis on published data of fungal hosts and fungal distribution. Based on these analyses, we conclude that microfungal communities are more similar within a single ocean basin than between ocean basins, but mangrove trees that are close phylogenetically do not necessarily harbor microfungal communities that are distinctly different from less closely related hosts.

Tradeoffs between reproduction and mycelium production in the unit-restricted decomposer Coprinus cinereus

A laboratory experiment was performed which examined tradeoffs between production of mycelium and reproduction (using stipe dry weight as an estimator of spore production) in the coprophilous mushroom species Coprinus cinereus. Isolates of the fungus taken from a single dikaryotic mycelium were grown in Petri plates containing yeast extract agar. Plates varied in diameter and resource density, but the total volume of agar was kept constant. Isolates grown in 100 mm and 150 mm diameter plates produced significantly less mycelium compared to isolates grown in 60 mm diameter plates. Within 60 mm plates there was no correlation between the efficiency of mycelium production and fruit body production, but in larger plates there was a significant negative correlation between the two. These results indicate that isolates grown on larger plates were less efficient at using resources than isolates grown on small plates, and that mycelium production is curtailed on larger plates to maintain spore production.