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Featured researches published by John R. Matchett.


Ecological Applications | 2017

Evidence of fuels management and fire weather influencing fire severity in an extreme fire event

Jamie M. Lydersen; Brandon M. Collins; Matthew L. Brooks; John R. Matchett; Kristen L. Shive; Nicholas A. Povak; Van R. Kane; Douglas F. Smith

Following changes in vegetation structure and pattern, along with a changing climate, large wildfire incidence has increased in forests throughout the western United States. Given this increase, there is great interest in whether fuels treatments and previous wildfire can alter fire severity patterns in large wildfires. We assessed the relative influence of previous fuels treatments (including wildfire), fire weather, vegetation, and water balance on fire-severity in the Rim Fire of 2013. We did this at three different spatial scales to investigate whether the influences on fire severity changed across scales. Both fuels treatments and previous low to moderate-severity wildfire reduced the prevalence of high-severity fire. In general, areas without recent fuels treatments and areas that previously burned at high severity tended to have a greater proportion of high-severity fire in the Rim Fire. Areas treated with prescribed fire, especially when combined with thinning, had the lowest proportions of high severity. The proportion of the landscape burned at high severity was most strongly influenced by fire weather and proportional area previously treated for fuels or burned by low to moderate severity wildfire. The proportion treated needed to effectively reduce the amount of high severity fire varied by spatial scale of analysis, with smaller spatial scales requiring a greater proportion treated to see an effect on fire severity. When moderate and high-severity fire encountered a previously treated area, fire severity was significantly reduced in the treated area relative to the adjacent untreated area. Our results show that fuels treatments and low to moderate-severity wildfire can reduce fire severity in a subsequent wildfire, even when burning under fire growth conditions. These results serve as further evidence that both fuels treatments and lower severity wildfire can increase forest resilience.


PLOS ONE | 2013

A Network Extension of Species Occupancy Models in a Patchy Environment Applied to the Yosemite Toad (Anaxyrus canorus)

Eric L. Berlow; Roland A. Knapp; Steven M. Ostoja; Richard J. Williams; Heather McKenny; John R. Matchett; Qinghua Guo; Patrick M. Kleeman; Matthew L. Brooks; Lucas Joppa

A central challenge of conservation biology is using limited data to predict rare species occurrence and identify conservation areas that play a disproportionate role in regional persistence. Where species occupy discrete patches in a landscape, such predictions require data about environmental quality of individual patches and the connectivity among high quality patches. We present a novel extension to species occupancy modeling that blends traditional predictions of individual patch environmental quality with network analysis to estimate connectivity characteristics using limited survey data. We demonstrate this approach using environmental and geospatial attributes to predict observed occupancy patterns of the Yosemite toad (Anaxyrus (= Bufo) canorus) across >2,500 meadows in Yosemite National Park (USA). A . canorus , a Federal Proposed Species, breeds in shallow water associated with meadows. Our generalized linear model (GLM) accurately predicted ~84% of true presence-absence data on a subset of data withheld for testing. The predicted environmental quality of each meadow was iteratively ‘boosted’ by the quality of neighbors within dispersal distance. We used this park-wide meadow connectivity network to estimate the relative influence of an individual Meadow’s ‘environmental quality’ versus its ‘network quality’ to predict: a) clusters of high quality breeding meadows potentially linked by dispersal, b) breeding meadows with high environmental quality that are isolated from other such meadows, c) breeding meadows with lower environmental quality where long-term persistence may critically depend on the network neighborhood, and d) breeding meadows with the biggest impact on park-wide breeding patterns. Combined with targeted data on dispersal, genetics, disease, and other potential stressors, these results can guide designation of core conservation areas for A . canorus in Yosemite National Park.


International Journal of Wildland Fire | 2013

The effect of leaf beetle herbivory on the fire behaviour of tamarisk (Tamarix ramosissima Lebed.)

Tom L. Dudley; Matthew L. Brooks; John R. Matchett

The non-native tree, Tamarix spp. has invaded desert riparian ecosystems in the south-western United States. Fire hazard has increased, as typically fire-resistant native vegetation is replaced by Tamarix. The tamarisk leaf beetle, Diorhabda carinulata Desbrochers, introduced for biological control, may affect fire behaviour by converting hydrated liveTamarixleavesandtwigsintodesiccatedanddeadfuels.Thispotentiallyincreasesfirehazardintheshorttermbefore native vegetation can be re-established. This study investigates how fire behaviour is altered in Tamarix fuels desiccated byDiorhabdaherbivoryataGreatBasinsite,andbyherbivorysimulatedbyfoliarherbicideataMojaveDesertsite.Italso evaluates the influence of litter depth on fire intensity. Fire behaviour was measured with a fire intensity index that integrates temperature and duration (degree-minutes above 708C), and with maximum temperature, duration, flame lengths,ratesofspread andvegetationremoval.Maximumtemperature,flame lengthandrateofspread wereenhancedby foliar desiccation of Tamarix at both sites. At only the Mojave site, there was a trend for desiccated trees to burn with greaterfireintensity.Atbothsites,firebehaviourparameterswereinfluencedtoagreaterdegreebylitterdepth,vegetation density and drier and windier conditions than by foliar desiccation.


International Journal of Wildland Fire | 2015

Relationships between annual plant productivity, nitrogen deposition and fire size in low-elevation California desert scrub

Leela E. Rao; John R. Matchett; Matthew L. Brooks; Robert F. Johnson; Richard A. Minnich; Edith B. Allen

Although precipitation is correlated with fire size in desert ecosystems and is typically used as an indirect surrogate for fine fuel load, a direct link between fine fuel biomass and fire size has not been established. In addition, nitrogen (N) deposition can affect fire risk through its fertilisation effect on fine fuel production. In this study, we examine the relationships between fire size and precipitation, N deposition and biomass with emphasis on identifying biomass and N deposition thresholds associated with fire spreading across the landscape. We used a 28-year fire record of 582 burns from low-elevation desert scrub to evaluate the relationship of precipitation, N deposition and biomass with the distribution of fire sizes using quantile regression. We found that models using annual biomass have similar predictive ability to those using precipitation and N deposition at the lower to intermediate portions of the fire size distribution. No distinct biomass threshold was found, although within the 99th percentile of the distribution fire size increased with greater than 125 g m–2 of winter fine fuel production. The study did not produce an N deposition threshold, but did validate the value of 125 g m–2 of fine fuel for spread of fires.


Scientific Reports | 2015

Detecting the influence of rare stressors on rare species in Yosemite National Park using a novel stratified permutation test

John R. Matchett; Philip B. Stark; Steven M. Ostoja; Roland A. Knapp; Heather McKenny; Matthew L. Brooks; William T. Langford; Lucas Joppa; Eric L. Berlow

Statistical models often use observational data to predict phenomena; however, interpreting model terms to understand their influence can be problematic. This issue poses a challenge in species conservation where setting priorities requires estimating influences of potential stressors using observational data. We present a novel approach for inferring influence of a rare stressor on a rare species by blending predictive models with nonparametric permutation tests. We illustrate the approach with two case studies involving rare amphibians in Yosemite National Park, USA. The endangered frog, Rana sierrae, is known to be negatively impacted by non-native fish, while the threatened toad, Anaxyrus canorus, is potentially affected by packstock. Both stressors and amphibians are rare, occurring in ~10% of potential habitat patches. We first predict amphibian occupancy with a statistical model that includes all predictors but the stressor to stratify potential habitat by predicted suitability. A stratified permutation test then evaluates the association between stressor and amphibian, all else equal. Our approach confirms the known negative relationship between fish and R. sierrae, but finds no evidence of a negative relationship between current packstock use and A. canorus breeding. Our statistical approach has potential broad application for deriving understanding (not just prediction) from observational data.


PLOS ONE | 2017

A multi-scale evaluation of pack stock effects on subalpine meadow plant communities in the Sierra Nevada

Steven R. Lee; Eric L. Berlow; Steven M. Ostoja; Matthew L. Brooks; Alexandre Génin; John R. Matchett; Stephen C. Hart

We evaluated the influence of pack stock (i.e., horse and mule) use on meadow plant communities in Sequoia and Yosemite National Parks in the Sierra Nevada of California. Meadows were sampled to account for inherent variability across multiple scales by: 1) controlling for among-meadow variability by using remotely sensed hydro-climatic and geospatial data to pair stock use meadows with similar non-stock (reference) sites, 2) accounting for within-meadow variation in the local hydrology using in-situ soil moisture readings, and 3) incorporating variation in stock use intensity by sampling across the entire available gradient of pack stock use. Increased cover of bare ground was detected only within “dry” meadow areas at the two most heavily used pack stock meadows (maximum animals per night per hectare). There was no difference in plant community composition for any level of soil moisture or pack stock use. Increased local-scale spatial variability in plant community composition (species dispersion) was detected in “wet” meadow areas at the two most heavily used meadows. These results suggest that at the meadow scale, plant communities are generally resistant to the contemporary levels of recreational pack stock use. However, finer-scale within-meadow responses such as increased bare ground or spatial variability in the plant community can be a function of local-scale hydrological conditions. Wilderness managers can improve monitoring of disturbance in Sierra Nevada meadows by adopting multiple plant community indices while simultaneously considering local moisture regimes.


Western North American Naturalist | 2003

Plant community patterns in unburned and burned blackbrush (Coleogyne ramosissima) shrublands in the Mojave Desert

Matthew L. Brooks; John R. Matchett


Biological Control | 2014

Synergistic interactions between leaf beetle herbivory and fire enhance tamarisk (Tamarix spp.) mortality

Gail M. Drus; Tom L. Dudley; Carla M. D’Antonio; Thomas Even; Matt L. Brooks; John R. Matchett


Land | 2017

Fire and the Distribution and Uncertainty of Carbon Sequestered as Aboveground Tree Biomass in Yosemite and Sequoia & Kings Canyon National Parks

James A. Lutz; John R. Matchett; Leland W. Tarnay; Douglas F. Smith; Kendall M. L. Becker; Tucker J. Furniss; Matthew L. Brooks


Open-File Report | 2015

Fire patterns in the range of the greater sage-grouse, 1984-2013 — Implications for conservation and management

Matthew L. Brooks; John R. Matchett; Douglas J. Shinneman; Peter S. Coates

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Matthew L. Brooks

United States Geological Survey

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Eric L. Berlow

University of California

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Alan L. Flint

United States Geological Survey

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Alicia Torregrosa

United States Geological Survey

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David S. Pilliod

United States Geological Survey

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Lorraine E. Flint

United States Geological Survey

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