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Featured researches published by Jonathan J. Smart.


PLOS ONE | 2016

Effects of including misidentified sharks in life history analyses: a case study on the grey reef shark Carcharhinus amblyrhynchos from Papua New Guinea

Jonathan J. Smart; Andrew Chin; Leontine Baje; Madeline E. Green; Sharon A. Appleyard; Andrew J. Tobin; Colin A. Simpfendorfer; William T. White

Fisheries observer programs are used around the world to collect crucial information and samples that inform fisheries management. However, observer error may misidentify similar-looking shark species. This raises questions about the level of error that species misidentifications could introduce to estimates of species’ life history parameters. This study addressed these questions using the Grey Reef Shark Carcharhinus amblyrhynchos as a case study. Observer misidentification rates were quantified by validating species identifications using diagnostic photographs taken on board supplemented with DNA barcoding. Length-at-age and maturity ogive analyses were then estimated and compared with and without the misidentified individuals. Vertebrae were retained from a total of 155 sharks identified by observers as C. amblyrhynchos. However, 22 (14%) of these were sharks were misidentified by the observers and were subsequently re-identified based on photographs and/or DNA barcoding. Of the 22 individuals misidentified as C. amblyrhynchos, 16 (73%) were detected using photographs and a further 6 via genetic validation. If misidentified individuals had been included, substantial error would have been introduced to both the length-at-age and the maturity estimates. Thus validating the species identification, increased the accuracy of estimated life history parameters for C. amblyrhynchos. From the corrected sample a multi-model inference approach was used to estimate growth for C. amblyrhynchos using three candidate models. The model averaged length-at-age parameters for C. amblyrhynchos with the sexes combined were L¯∞ = 159 cm TL and L¯0 = 72 cm TL. Females mature at a greater length (l50 = 136 cm TL) and older age (A50 = 9.1 years) than males (l50 = 123 cm TL; A50 = 5.9 years). The inclusion of techniques to reduce misidentification in observer programs will improve the results of life history studies and ultimately improve management through the use of more accurate data for assessments.


PLOS ONE | 2015

Rediscovery of the Threatened River Sharks, Glyphis garricki and G. glyphis, in Papua New Guinea

William T. White; Sharon A. Appleyard; Benthly Sabub; Peter M. Kyne; Mark Harris; Rickson Lis; Leontine Baje; Thomas Usu; Jonathan J. Smart; Shannon Corrigan; Lei Yang; Gavin J. P. Naylor

Recent surveys of the shark and ray catches of artisanal fishers in the Western Province of Papua New Guinea (PNG) resulted in the rediscovery of the threatened river sharks, Glyphis garricki and Glyphis glyphis. These represent the first records of both species in PNG since the 1960s and 1970s and highlight the lack of studies of shark biodiversity in PNG. Two individuals of G. garricki and three individuals of G. glyphis were recorded from coastal marine waters of the Daru region of PNG in October and November 2014. The two G. garricki specimens were small individuals estimated to be 100–105 cm and ~113 cm total length (TL). The three G. glyphis specimens were all mature, one a pregnant female and two adult males. These are the first adults of G. glyphis recorded to date providing a more accurate maximum size for this species, i.e. ~260 cm TL. A single pup which was released from the pregnant female G. glyphis, was estimated to be ~65 cm TL. Anecdotal information from the fishers of pregnant females of G. glyphis containing 6 or 7 pups provides the first estimate of litter size for this species. The jaws of the pregnant female G. glyphis were retained and a detailed description of the dentition is provided, since adult dentition has not been previously documented for this species. Genetic analyses confirmed the two species cluster well within samples from these species collected in northern Australia.


African Journal of Marine Science | 2015

Age and growth of the common blacktip shark Carcharhinus limbatus from Indonesia, incorporating an improved approach to comparing regional population growth rates

Jonathan J. Smart; Andrew Chin; Andrew J. Tobin; Colin A. Simpfendorfer; William T. White

Age and growth estimates from length‑at‑age data were produced for the common blacktip shark Carcharhinus limbatus from Indonesia. Back‑calculation techniques were used due to a low sample size (n = 30), which was dominated by large, mature sharks. A multi‑model approach incorporating Akaikes information criterion with a bias correction (AICc) was used to estimate growth rates, with the von Bertalanffy growth function (VBGF) providing the best fit for the separate sexes using the back‑calculation data. These age and growth estimates were then compared to those of other populations of C. limbatus from the USA and South Africa using a combination of VBGF parameters and instantaneous (empirical) growth rates at birth (dL/dt0) and maturity (dL/dtmat). In comparison with populations from the USA, C. limbatus from Indonesia grow substantially larger and are more similar to South African populations. Differences in empirical growth rates were also determined between the populations, although this was not detected by the VBGF parameter k. This occurred because the parameter k is a measure of the rate at which a population reaches asymptotic length (L∞) and is not a measure of growth. This study demonstrated that the use of dL/dt0 and dL/dtmat to measure and compare empirical growth rates can be a useful addition to life‑history studies.


Journal of Fish Biology | 2016

Life histories of two deep-water Australian endemic elasmobranchs: Argus skate Dipturus polyommata and eastern spotted gummy shark Mustelus walkeri

Cassandra L. Rigby; William T. White; Jonathan J. Smart; Colin A. Simpfendorfer

Two Australian endemic elasmobranchs, the Argus skate Dipturus polyommata and the eastern spotted gummy shark Mustelus walkeri, were collected from the by-catch of a prawn Melicertus plebejus trawl fishery off Queensland. Age and growth parameters were estimated from growth band counts in vertebral sections of 220 D. polyommata and 44 M. walkeri. Dipturus polyommata males and females had an observed maximum age of 10 years and reached maximum sizes of 369 and 371 mm total length (LT ), respectively. Mustelus walkeri lived longer, with the oldest female aged 16 years and measuring 1050 mm stretched total length (LST ), and oldest male aged 9 years and 805 mm LST . Dipturus polyommata grew relatively fast with a von Bertalanffy growth completion parameter of k = 0·208 year(-1) with males reaching maturity at 4·0 years (c. 278 mm LT ) and females at 5·1 years (c. 305 mm LT ). Mustelus walkeri grew more slowly with k = 0·033 year(-1) with males estimated to mature at 7-9 years (670-805 mm LST ) and females at 10-14 years (833-1012 mm LST ). Length at birth inferred from neonate D. polyommata was 89-111 mm LT while for M. walkeri it was estimated to be 273 LST based on the value of L0 from the von Bertalanffy growth model. Both species appeared to have continuous reproductive cycles and low fecundity with an average ovarian fecundity of eight follicles for D. polyommata and a litter size of five to seven pups for M. walkeri. Based on these life-history traits, D. polyommata is more resilient to fishing pressure than M. walkeri.


Marine and Freshwater Research | 2017

Age, growth and maturity of oceanic whitetip shark (Carcharhinus longimanus) from Papua New Guinea

Brooke M. D'Alberto; Andrew Chin; Jonathan J. Smart; Leontine Baje; William T. White; Colin A. Simpfendorfer

Oceanic whitetip sharks (Carcharhinus longimanus) in the Western Central Pacific have been overfished and require improved assessment and management to enable planning of recovery actions. Samples from 103 individuals (70 males and 33 females; 76.0–240- and 128–235-cm total length (TL) respectively) were used to estimate age, growth and maturity parameters from sharks retained by longline fisheries in Papua New Guinea. Back-calculation was used because of the low number of juveniles and a multimodel framework with Akaike’s information criterion corrected for small sample size (AICc) estimated growth parameters. The von Bertalanffy growth model provided the best fitting growth model for both sexes. Parameter estimates for males were: asymptotic length (L∞)=315.6cm TL; growth coefficient (k)=0.059 year–1; and length at birth (L0)=75.1cm TL. For females, the parameter estimates were: L∞=316.7cm TL; k=0.057 year–1; and L0=74.7cm TL. Maximum age was estimated to be 18 years for males and 17 years for females, with a calculated longevity of 24.6 and 24.9 years respectively. Males matured at 10.0 years and 193cm TL, whereas females matured at 15.8 years and 224cm TL. C. longimanus is a slow-growing, late-maturity species, with regional variation in life history parameters, highlighting increased vulnerability to fishing pressure in this region.


Marine and Freshwater Research | 2018

Life history characteristics of the silky shark Carcharhinus falciformis from the central west Pacific

Michael I. Grant; Jonathan J. Smart; William T. White; Andrew Chin; Leontine Baje; Colin A. Simpfendorfer

In the central west Pacific region, silky sharks (Carcharhinus falciformis) are commonly taken in fisheries, forming up to 95% of incidental elasmobranch bycatch. The present study examined the life history of silky sharks (n=553) from Papua New Guinean waters. Age was analysed using sectioned vertebrae, and a multimodel approach was applied to the length-at-age data to fit growth models. Females ranged in length from 65.0- to 253.0-cm total length (TL), with the oldest estimated at 28 years. Males ranged in length from 68.4 to 271.3cm TL and were aged to a maximum of 23 years. The logistic model provided the best fitting growth parameter estimates of length at birth L0=82.7cm TL, growth coefficient g=0.14year–1 and asymptotic length L∞=261.3cm TL for the sexes combined. Females reached sexual maturity at 204cm TL and 14.0 years, whereas males reached maturity at 183cm TL and 11.6 years. The average litter size from 28 pregnant females was 8 (range of 3–13). The growth parameters and late ages of sexual maturation for silky sharks in the central west Pacific suggest a significant risk from fisheries exploitation without careful population management.


Aquatic Conservation-marine and Freshwater Ecosystems | 2013

Overcoming the constraints of low sample sizes to produce age and growth data for rare or threatened sharks

Jonathan J. Smart; Alastair V. Harry; Andrew J. Tobin; Colin A. Simpfendorfer


Fish and Fisheries | 2016

Multimodel approaches in shark and ray growth studies: strengths, weaknesses and the future

Jonathan J. Smart; Andrew Chin; Andrew J. Tobin; Colin A. Simpfendorfer


Fisheries Research | 2017

Stochastic demographic analyses of the silvertip shark (Carcharhinus albimarginatus) and the common blacktip shark (Carcharhinus limbatus) from the Indo-Pacific

Jonathan J. Smart; Andrew Chin; Andrew J. Tobin; William T. White; Brian Kumasi; Colin A. Simpfendorfer


Coral Reefs | 2017

Life history of the silvertip shark Carcharhinus albimarginatus from Papua New Guinea

Jonathan J. Smart; Andrew Chin; Leontine Baje; Andrew J. Tobin; Colin A. Simpfendorfer; William T. White

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Sharon A. Appleyard

Commonwealth Scientific and Industrial Research Organisation

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