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Proceedings of the National Academy of Sciences of the United States of America | 2001

Partial molar volume, surface area, and hydration changes for equilibrium unfolding and formation of aggregation transition state: High-pressure and cosolute studies on recombinant human IFN-γ

Jonathan N. Webb; Serena D. Webb; Jeffrey L. Cleland; John F. Carpenter; Theodore W. Randolph

The equilibrium dissociation of recombinant human IFN-γ was monitored as a function of pressure and sucrose concentration. The partial molar volume change for dissociation was −209 ± 13 ml/mol of dimer. The specific molar surface area change for dissociation was 12.7 ± 1.6 nm2/molecule of dimer. The first-order aggregation rate of recombinant human IFN-γ in 0.45 M guanidine hydrochloride was studied as a function of sucrose concentration and pressure. Aggregation proceeded through a transition-state species, N*. Sucrose reduced aggregation rate by shifting the equilibrium between native state (N) and N* toward the more compact N. Pressure increased aggregation rate through increased solvation of the protein, which exposes more surface area, thus shifting the equilibrium away from N toward N*. The changes in partial molar volume and specific molar surface area between the N* and N were −41 ± 9 ml/mol of dimer and 3.5 ± 0.2 nm2/molecule, respectively. Thus, the structural change required for the formation of the transition state for aggregation is small relative to the difference between N and the dissociated state. Changes in waters of hydration were estimated from both specific molar surface area and partial molar volume data. From partial molar volume data, estimates were 25 and 128 mol H2O/mol dimer for formation of the aggregation transition state and for dissociation, respectively. From surface area data, estimates were 27 and 98 mol H2O/mol dimer. Osmotic stress theory yielded values ≈4-fold larger for both transitions.


Biotechnology Progress | 2000

Stability of Subtilisin and Lysozyme under High Hydrostatic Pressure

Jonathan N. Webb; John F. Carpenter; Theodore W. Randolph

The stabilities of subtilisin and lysozyme under hydrostatic pressures up to 200 MPa were investigated for up to 7 days at 25 °C. Methods were chosen to assess changes in tertiary and secondary protein structure as well as aggregation state. Tertiary structure was monitored in situ with second derivative UV spectroscopy and after pressure treatment by dynamic light scattering and second derivative UV spectroscopy. Secondary structure and potential secondary structural changes were characterized by second derivative FTIR spectroscopy. Changes in aggregation state were assessed using dynamic light scattering. Additionally, protein concentration balances were carried out to detect any loss of protein as a function of pressure. For the conditions tested, neither protein shows measurable changes in tertiary or secondary structure or signs of aggregation. Lysozyme concentration balances show no dependence on pressure. Subtilisin concentration balances at high protein concentration (4 mg/mL and higher) do not show pressure dependence. However, the concentration balances carried out at 0.4 mg/mL show a clear sign of pressure dependence. These results may be explained by protein interaction with the vial surface and appear to be rate limited by the equilibrium between active and inactive protein on the surface. Pressure increases protein loss, and the estimated partial molar volume change between the two states is estimated to be −20 ± 10 mL/mol.


Biotechnology and Bioengineering | 2011

Quaternary conformational stability: The effect of reversible self‐association on the fibrillation of two insulin analogs

D. Brett Ludwig; Jonathan N. Webb; Cristina Fernández; John F. Carpenter; Theodore W. Randolph

Under conditions relevant to the manufacturing of insulin (e.g., pH 3, room temperature), biosynthetic human insulin (BHI), and Lispro insulin (Lispro) require a nucleation step to initiate aggregation. However, upon seeding with preformed aggregates, both insulins rapidly aggregate into nonnative fibrils. Far ultraviolet circular dichroism (far‐UV CD) and second derivative Fourier transform infrared (2D‐FTIR) spectroscopic analyses show that the fibrillation process involves a change in protein secondary structure from α‐helical in native insulin to predominantly β‐sheet in the nonnative fibrils. After seeding, Lispro aggregates faster than BHI, likely because of a reduced propensity to reversibly self‐associate. Composition gradient multi‐angle light scattering (CG‐MALS) analyses show that Lispro is more monomeric than BHI, whereas their conformational stabilities measured by denaturant‐induced unfolding are statistically indistinguishable. For both BHI and Lispro, as the protein concentration increases, the apparent first‐order rate constant for soluble protein loss decreases. To explain these phenomena, we propose an aggregation model that assumes fibril growth through monomer addition with competitive inhibition by insulin dimers. Biotechnol. Bioeng. 2011;108: 2359–2370.


Biochemistry | 2002

Aggregation of granulocyte colony stimulating factor under physiological conditions: characterization and thermodynamic inhibition.

Sampathkumar Krishnan; Eva Y. Chi; Jonathan N. Webb; Byeong S. Chang; Daxian Shan; Merrill Goldenberg; Mark C. Manning; Theodore W. Randolph; John F. Carpenter


Journal of Crystal Growth | 2000

Pressure dependence of subtilisin crystallization kinetics

R.Y. Waghmare; Jonathan N. Webb; Theodore W. Randolph; Maurice A. Larson; Charles E. Glatz


Journal of Crystal Growth | 1999

Pressure effect on subtilisin crystallization and solubility

Jonathan N. Webb; R.Y. Waghmare; John F. Carpenter; Charles E. Glatz; Theodore W. Randolph


Biopharm | 2002

Freezing bulk-scale biopharmaceuticals using common techniques: and the magnitude of freeze-concentration

Serena D. Webb; Jonathan N. Webb; Timethy G. Hughes; David F. Sesin; Aimee C. Kincaid


Archive | 2003

Methods for protein refolding

Theodore W. Randolph; John F. Carpenter; Richard J. St. John; Jonathan N. Webb


Archive | 2001

Improved protein disaggregation and refolding using high pressure

Theodore W. Randolph; John F. Carpenter; John Richard; Jonathan N. Webb


Archive | 2001

Verbesserter zerfall und rückfaltung von proteinen mittels hohen drucks Improved decay and rear folding of proteins by means of high pressure

John F. Carpenter; Theodore W. Randolph; John Richard J. San Francisco; Jonathan N. Webb

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John F. Carpenter

University of Colorado Boulder

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Serena D. Webb

University of Colorado Boulder

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Cristina Fernández

National Institutes of Health

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