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Dive into the research topics where Jonathan Somma is active.

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Featured researches published by Jonathan Somma.


Gynecologic oncology case reports | 2012

Invasive recurrence of serous borderline ovarian tumor as multifocal lymphadenopathy 25 years after initial diagnosis

Ioannis Alagkiozidis; Sandy Dorcelus; Jonathan Somma; Lee Yi Chun; Ghadir Salame

► We present the case with the latest reported recurrence of low malignant potential ovarian tumor. ► Borderline ovarian tumors have the potential for delayed recurrence that is not always salvageable surgically. ► Optimization of surveillance strategies and lifelong follow up is required for these patients.


Molecular Cancer Research | 2018

Dual Inhibition of CDK4 and CDK2 via Targeting p27 Tyrosine Phosphorylation Induces a Potent and Durable Response in Breast Cancer Cells

Priyank Patel; Vladislav Tsiperson; Susan R. S. Gottesman; Jonathan Somma; Stacy W. Blain

Cyclin-dependent kinase 4/6 (CDK4/6)-specific inhibitors, such as palbociclib, have shown clinical efficacy, but primary or secondary resistance has emerged as a problem. To develop more effective therapeutic approaches, investigation is needed into the mechanisms of resistance or adaption. Here, it is demonstrated that CDK2 compensates for loss of CDK4 activity to rescue palbociclib-arrested breast cancer cells, suggesting that inhibition of both kinases is required to achieve durable response. In addition, a novel strategy is described to inhibit tyrosine phosphorylation of p27Kip1 (CDKN1B) and simultaneously inhibit both CDK2 and CDK4. p27Kip1 is a required assembly factor for cyclin–CDK4 complexes, but it must be phosphorylated on residue Y88 to open or activate the complex. The Brk-SH3 peptide, ALT, blocks p27 Y88 phosphorylation, inhibiting CDK4. Nonphosphorylated p27 is no longer a target for ubiquitin-mediated degradation and this stabilized p27 now also inhibits CDK2 activity. Thus, ALT induction inhibits both the kinase that drives proliferation (CDK4) and the kinase that mediates resistance (CDK2), causing a potent and long-lasting cell-cycle arrest. ALT arrests growth of all breast cancer subgroups and synergizes with palbociclib to increase cellular senescence and to cause tumor regression in breast cancer xenograft models. The use of ALT demonstrates that both CDK4 and CDK2 need to be inhibited if long-term efficacy is to be achieved and represents a novel modality to inhibit breast cancer cells. Implications: Modulating tyrosine phosphorylation of p27 impacts both proliferative (CDK4) and resistance (CDK2) mechanisms in breast cancer and suggests that phospho-p27 status may serve as a biomarker for patients that are responsive to CDK4/6 inhibition. Mol Cancer Res; 16(3); 361–77. ©2018 AACR.


Cancer Research | 2017

Abstract 2348: Targeting the p27kip1/cdk4/cdk2/Rb axis in breast cancer using a peptidomimetic of Brk’s SH3 domain

Stacy W. Blain; Jason Quinones; Priyank Patel; Vladislav Tsiperson; Susan R. S. Gottesman; Jonathan Somma; Yun Wu

Purpose: Cyclin D-cdk4 (DK4) has been a highly sought after therapeutic target because it drives cancer proliferation in a majority of human tumors. We have explored the clinical utility of a recently discovered mechanism of cell cycle control exerted on DK4 by p27Kip1 and its activator, the Breast tumor Related Kinase (Brk), in predicting responsiveness to therapy and as a new target for treatment. Although known as a DK4 assembly factor and cdk2 inhibitor, p27 also acts as a DK4 ON/OFF “switch.” Tyrosine (Y) phosphorylation of p27 (pY) by Brk gatekeeps both ATP binding and CAK phosphorylation of cdk4’s T loop, essential for DK4 activation. This function is restricted to cdk4: p27’s association with cdk2, whether Y phosphorylated or not, appears to be inhibitory. However, in vivo Y phosphorylated p27 is a target for cdk2-dependent ubiquitin-mediated degradation, reducing p27’s association with cdk2, indirectly activating this complex. We showed that blocking p27 pY inactivates cdk4 directly AND cdk2 indirectly, and thus represents a novel way to block cancer cell proliferation. pY also serves as a predictive biomarker of cdk4 activity and tumor response. Methods: We used a small peptide, ALT, which contains a portion of Brk’s SH3 domain. ALT binds to p27, blocks Brk’s association and ability to phosphorylate p27, inhibiting cdk4 and increasing p27’s ability to inhibit cdk2. We engineered a lipid-based nanoparticle delivery vehicle (NP-ALT), permitting us to test ALT as a first generation therapeutic in breast cancer cell lines that were both responsive and non-responsive to cdk4i therapy. ALT was also used with Palbociclib to determine if combination therapy reduced drug resistance. We developed a dual IHC assay for p27 and pY, which we used to analyze paraffin-embedded, archival human tumor samples, to determine whether we could pinpoint patients who would have responded to cdk4 inhibition therapy. Results: NP-ALT blocks pY, cdk4 and cdk2 activity, and proliferation in both Palbociclib sensitive and resistant cell lines. As a dual therapy, ALT treatment synergized with Palbociclib to arrest cells for >30 days, increased senescence, and in animal models caused tumor regression instead of just slowing tumor growth as seen with Palbociclib alone. Analysis of human cancer, obtained from archival sources, demonstrated that pY is never detected in quiescent benign mammary tissue, but is detected in about half of the advanced ER/PR+/Her2- tumors analyzed, and using explant culture techniques, we were able to stratify pY with Palbociclib response. Conclusion: Use of an Brk SH3 based peptide (NP-ALT) has proven effective in blocking p27 pY, inhibiting both cdk2 and cdk4, inducing senescence and increased durability. pY levels correlate with Palbociclib sensitivity in low, moderate and non-responders, suggesting that this may be a biomarker highlighting responsiveness to cdk4i therapy. Citation Format: Stacy W. Blain, Jason Quinones, Priyank Patel, Vladislav Tsiperson, Susan Gottesman, Jonathan Somma, Yun Wu. Targeting the p27kip1/cdk4/cdk2/Rb axis in breast cancer using a peptidomimetic of Brk’s SH3 domain [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2017; 2017 Apr 1-5; Washington, DC. Philadelphia (PA): AACR; Cancer Res 2017;77(13 Suppl):Abstract nr 2348. doi:10.1158/1538-7445.AM2017-2348


Cancer Cytopathology | 2017

Computer-assisted cytologic diagnosis in pancreatic FNA: An application of neural networks to image analysis

Amir Momeni‐Boroujeni; Elham Yousefi; Jonathan Somma

Fine‐needle aspiration (FNA) biopsy is an accurate method for the diagnosis of solid pancreatic masses. However, a significant number of cases still pose a diagnostic challenge. The authors have attempted to design a computer model to aid in the diagnosis of these biopsies.


Acta Cytologica | 2010

Thyroid fine needle aspiration cytology: follicular lesions and the gray zone.

Jonathan Somma; Nicolas F. Schlecht; Daniel S. Fink; Samer Khader; Richard V. Smith; Antonio Cajigas


Gastrointestinal Endoscopy | 2017

111 Successful Creation of Pancreatic Cancer Organoids By Means of Eus-Guided Fine-Needle Biopsy (EUS-FNB) for Personalized Cancer Treatment

Hervé Tiriac; Juan Carlos Bucobo; Demetrios Tzimas; Suman Grewel; Joseph F. LaComb; Leahana Rowehl; Satish Nagula; Maoxin Wu; Joseph Kim; Aaron R. Sasson; Shivakumar Vignesh; Laura Martello; Maria Munoz-Sagastibelza; Jonathan Somma; David A. Tuveson; Ellen Li; Jonathan M. Buscaglia


Archive | 2018

Living biobank of endoscopic ultrasound guided fine needle biopsy-derived PDAC organoids: A study of two contrasting populations

Maria Munoz-Sagastibelza; Hervé Tiriac; Shivakumar Vignesh; J. P. Sanchez; Jonathan Somma; Ellen Li; Juan Carlos Bucobo; Demetrios Tzimas; Maoxin Wu; L. Martello-Rooney; David A. Tuveson; Jonathan M. Buscaglia


Cancer Research | 2018

Abstract LB-214: pY88-p27Kip1 status acts as a biomarker to determine responsiveness to cdk4 inhibitor therapy

Stacy W. Blain; Susan R. S. Gottesman; Jonathan Somma; Lisa Dresner; Vladislav Tsiperson


Journal of the American Society of Cytopathology | 2017

Digital Image Analysis of Nuclear Morphometry in Thyroid Fine Needle Biopsies

Amin Heidarian; Elham Yousefi; Jonathan Somma


Journal of the American Society of Cytopathology | 2017

Multilayer Perceptron Neural Network Analysis for the Diagnosis of High Grade Urothelial Carcinoma

Daniel Diaz; Amir Momeni‐Boroujeni; Jonathan Somma

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Elham Yousefi

SUNY Downstate Medical Center

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Stacy W. Blain

SUNY Downstate Medical Center

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Susan R. S. Gottesman

SUNY Downstate Medical Center

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Vladislav Tsiperson

SUNY Downstate Medical Center

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Amin Heidarian

SUNY Downstate Medical Center

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David A. Tuveson

Cold Spring Harbor Laboratory

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Ellen Li

Stony Brook University

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Hervé Tiriac

Cold Spring Harbor Laboratory

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