Network


Latest external collaboration on country level. Dive into details by clicking on the dots.

Hotspot


Dive into the research topics where José A. Amador is active.

Publication


Featured researches published by José A. Amador.


Soil Science | 1997

SPATIAL DISTRIBUTION OF SOIL PHOSPHATASE ACTIVITY WITHIN A RIPARIAN FOREST1

José A. Amador; Andrew M. Glucksman; Jodi B. Lyons; Josef H. Görres

Riparian forest zones are used for mitigation of agricultural and urban nonpoint source pollution. Phosphatase activity is ubiquitous in soil and sensitive to environmental perturbations, and hence, it may serve as an indicator of soil quality in riparian areas. We examined the relationship betw


Soil Science | 1997

DYNAMICS OF CARBON AND NITROGEN MINERALIZATION, MICROBIAL BIOMASS, AND NEMATODE ABUNDANCE WITHIN AND OUTSIDE THE BURROW WALLS OF ANECIC EARTHWORMS (LUMBRICUS TERRESTRIS)

Josef H. Görres; Mary C. Savin; José A. Amador

We conducted a laboratory study using soil cores to determine whether anecic earthworm (Lumbricus terrestris) burrow linings (the drilosphere) are sites for enhanced carbon and nitrogen mineralization and increased microbial biomass and nematode abundance. We compared microbial biomass C, C mineralization rates, metabolic quotient, levels of inorganic N (NO − [over] 3 and NH + [over] 4), and nematode abundance over the course of 11 weeks in soil from earthworm burrows, bulk soil away from burrows, and a control soil in cores to which no earthworms were added. Significant differences were observed in microbial biomass carbon, which was 38 to 84% lower, and carbon mineralization and metabolic quotient, which were 2.3 to 7.5 and 5.6 to 17.4 times, respectively, higher in burrow than in control soil. No significant differences were observed in these variables between bulk and control soil. In addition, nematodes were 3.7 to 6.5 times more abundant, and inorganic N levels 21 to 78% higher in burrow than in control soil, with no significant differences observed between bulk and control soil. Dynamics of microbial biomass carbon and inorganic N followed the same general pattern in burrow, bulk, and control soil. By contrast, dynamics of nematode abundance, carbon mineralization, and metabolic quotient differed between burrow and both bulk and control soil, with peak values observed at 5, 7, and 11 weeks for nematode abundance, C mineralization, and metabolic quotient, respectively. Our results suggest that earthworms may have an indirect effect on soil C and N dynamics by stimulating the activities of nematodes and their interaction with microbial biomass in the drilosphere to a greater degree than is observed in soil that has not come in direct contact with earthworms.


Soil Biology & Biochemistry | 2001

Biogeophysical factors influencing soil respiration and mineral nitrogen content in an old field soil

Mary C. Savin; Josef H. Görres; Deborah A. Neher; José A. Amador

Microbivorous grazers are thought to enhance nutrient mineralization. The predicted effect of microbivory on nutrient cycling depends on the pore habitat model used. We evaluated CO2 evolution and mineral N content of an old field soil to test two alternative habitat hypotheses. The exclusion hypothesis predicts that nematodes are separated from their microbial food resources in water-filled pores when soils dry, resulting in slower rates of biogeochemical transformations. The enclosure hypothesis predicts that nematode densities increase relative to their forage in smaller, isolated water volumes when soils dry, accelerating rates of biogeochemical transformations. We investigated the effect of soil moisture on the relationship between microbial biomass, microbivorous and predaceous nematodes, soil respiration and mineral N concentrations in an old field five times during the course of a year. We could evaluate the validity of the two habitat hypotheses for the entire field only in August 1997 because that was the only sampling date when maximum water-filled pore diameters were smaller than microbivorous nematode body diameters in all sampled field locations. The mean microbivorous and predaceous nematode abundances for the field in August were greater than 6300 kg 21 and 80,000 kg 21 , respectively. Accordingly, the exclusion hypothesis was rejected. Predaceous nematode abundance was markedly higher in August than at any other sampling date. The high abundance of predators present suggests that detrital resources were not limiting productivity and that predators and microbivores were in enclosures, allowing predators to efficiently access their prey. Spatial maps, in agreement with linear correlation analyses, suggest that under our driest sampling conditions, soil respiration and mineral N content were controlled by microbivory and predation. q 2001 Elsevier Science Ltd. All rights reserved.


Geoderma | 2000

Fine-scale spatial variability of physical and biological soil properties in Kingston, Rhode Island

José A. Amador; Yong Wang; Mary C. Savin; Josef H. Görres

Abstract We evaluated the fine-scale (cm) variability of bulk density (ρB), organic matter content (%OM), volumetric water content (θV), and carbon mineralization rate (Cmin) at specific values of water potential in an old field soil. We measured these variables in soil samples obtained using paired abutting, 5-cm diameter, 10-cm deep cores. To compare abutting core properties, abutting cores were randomly assigned to one of two groups, A or B, using permutation procedures in order to account for the possibility of chance effects. Comparisons were made using either 10 (θV and Cmin) or 40 (% OM and ρB) pairs of samples in May, August, and November of 1997 and March of 1998. No differences were observed in the distribution of values among groups of cores for all the variables measured. Furthermore, there were no seasonal differences in coefficient of variation for any of the variables. Values of coefficient of variation followed the order: Cmin>θV>% OM>ρB. The difference between paired cores relative to population means (RD) was highest for Cmin (29.7%), followed by %OM (12.3%), θV (9.1%) and ρB (5.9%). Our results indicate that variability in soil properties (RD) at the centimeter scale is lowest for physical properties (θV and ρB) and highest for biological properties (%OM and Cmin). The assumption of identity among adjacent cores does not appear to be justified for the soil properties evaluated in our study.


Plant and Soil | 1999

Grazing in a porous environment. 2. Nematode community structure

Deborah A. Neher; Thomas R. Weicht; Mary C. Savin; Josef H. Görres; José A. Amador

The influence of soil matric potential on nematode community composition and grazing associations were examined. Undisturbed cores (5 cm diameter, 10 cm depth) were collected in an old field dominated by perennial grasses on a Hinckley sandy loam at Peckham Farm near Kingston, Rhode Island. Ten pairs of cores were incubated at −3, −10, −20 and −50 kPa matric potential after saturation for 21–28 or 42–58 days. Nematodes were extracted using Cobbs decanting and sieving method followed by sucrose centrifugal-flotation and identified to family or genus. Collembola and enchytraeids present were also enumerated because they are grazers that reside in air-filled spaces. Direct counts of bacteria and fungi were made to estimate biovolume using fluorescein isothiocyanate and fluorescein diacetate stains, respectively. Trophic diversity and maturity indices were calculated for nematode communities. Three patterns of matric potential effect were observed for nematode taxa. One, there was a consistent effect of matric potential for all seasons for Alaimus, Monhysteridae, Prismatolaimus, Paraxonchium and Dorylaimoides. Two, some effects of matric potential were consistent among seasons and other effects were inconsistent for Aphelenchoides, Aphelenchus, Cephalobidae, Coomansus, Eudorylaimus, Huntaphelenchoides, Panagrolaimidae, Paraphelenchus, Sectonema, and Tripyla. Third, effects of matric potential were always inconsistent among seasons for Aphanolaimus, Aporcelaimellus, Bunonema, Rhabditidae, and Tylencholaimus. As predicted, fungal and bacterial biomass responded oppositely to matric potential. Total bacterial biomass was greater at −3 kPa than −10, −20 and −50 kPa (P=0.0095). Total fungal biomass was greater at −50, −20 and −10 kPa than −3 kPa (P=0.0095). Neither bacterial-feeding, fungal-feeding nor predacious nematodes correlated significantly with bacterial or fungal biomass. Omnivorous and predacious nematodes correlated positively with number of bacterial-feeding nematodes; predacious nematodes also correlated positively with fungal-feeding nematodes. Numbers of Collembola and enchytraeids were more often correlated positively with microbial-grazing nematode numbers in drier than moist soils. From this study, we propose two mechanisms that may explain nematode community structure changes with matric potential: differential anhydrobiosis and/or enclosure hypotheses. The later suggests that drying of soil generates pockets of moisture in aggregates that become isolated from one another enclosing nematodes and their food in relatively high concentrations creating patches of activity separated by larger areas of inactivity.


Journal of Environmental Quality | 2015

Evaluation of water quality functions of conventional and advanced soil-based onsite wastewater treatment systems.

Jennifer Cooper; George Loomis; David Kalen; José A. Amador

Shallow narrow drainfields are assumed to provide better wastewater renovation than conventional drainfields and are used for protection of surface and ground water. To test this assumption, we evaluated the water quality functions of two advanced onsite wastewater treatment system (OWTS) drainfields-shallow narrow (SND) and Geomat (GEO)-and a conventional pipe and stone (P&S) drainfield over 12 mo using replicated ( = 3) intact soil mesocosms. The SND and GEO mesocosms received effluent from a single-pass sand filter, whereas the P&S received septic tank effluent. Between 97.1 and 100% of 5-d biochemical oxygen demand (BOD), fecal coliform bacteria, and total phosphorus (P) were removed in all drainfield types. Total nitrogen (N) removal averaged 12.0% for P&S, 4.8% for SND, and 5.4% for GEO. A mass balance analysis accounted for 95.1% (SND), 94.1% (GEO), and 87.6% (P&S) of N inputs. When the whole treatment train (excluding the septic tank) is considered, advanced systems, including sand filter pretreatment and SND or GEO soil-based treatment, removed 99.8 to 99.9% of BOD, 100% of fecal coliform bacteria and P, and 26.0 to 27.0% of N. In contrast, the conventional system removed 99.4% of BOD and 100% of fecal coliform bacteria and P but only 12.0% of N. All drainfield types performed similarly for most water quality functions despite differences in placement within the soil profile. However, inclusion of the pretreatment step in advanced system treatment trains results in better N removal than in conventional treatment systems despite higher drainfield N removal rates in the latter.


Journal of Environmental Science and Health Part A-toxic\/hazardous Substances & Environmental Engineering | 2007

Effects of tetracycline on antibiotic resistance and removal of fecal indicator bacteria in aerated and unaerated leachfield mesocosms

Janet A. Atoyan; Erika L. Patenaude; David A. Potts; José A. Amador

Antibiotics can be present in low concentrations in domestic wastewater, but little is known about their effect on bacteria in onsite wastewater treatment systems. Mesocosms, consisting of soil-filled lysimeters representing the leachfield of a septic system under aerated (AIR) and unaerated (LEACH) conditions, were used to study the effects of tetracycline addition (5 mg L− 1) to septic tank effluent on tetracycline resistance in the fecal indicator bacteria Escherichia coli and fecal streptococci, and on their removal. The mesocosms were dosed with antibiotic for 10 days, and effects monitored for 52 days. The fraction of resistant bacteria in mesocosm drainage water relative to that in septic tank effluent, ΓRes, for E. coli ranged from 0 to 0.66 in the AIR treatment and from 0 to 3.32 in the LEACH treatment. For fecal streptococci, ΓRes ranged from 0 to 0.41 and from 0.63 to 1.06 in the AIR and LEACH treatments, respectively. No significant differences in antibiotic resistance of fecal indicator bacteria were observed among sampling dates in soil or water from either treatment. Tetracycline had no significant effect on removal of fecal indicator bacteria, which ranged from 99.9 to 100% for E. coli and from 95.9 to 100% for fecal streptococci. Our results suggest that short-term addition of tetracycline at environmentally-relevant concentrations is likely to have minimal consequences on pathogen removal from wastewater and development of antibiotic resistance among pathogenic bacteria in leachfield soil.


PLOS ONE | 2016

Hell and High Water: Diminished Septic System Performance in Coastal Regions Due to Climate Change.

Jennifer Cooper; George Loomis; José A. Amador

Climate change may affect the ability of soil-based onsite wastewater treatment systems (OWTS) to treat wastewater in coastal regions of the Northeastern United States. Higher temperatures and water tables can affect treatment by reducing the volume of unsaturated soil and oxygen available for treatment, which may result in greater transport of pathogens, nutrients, and biochemical oxygen demand (BOD5) to groundwater, jeopardizing public and aquatic ecosystem health. The soil treatment area (STA) of an OWTS removes contaminants as wastewater percolates through the soil. Conventional STAs receive wastewater from the septic tank, with infiltration occurring deeper in the soil profile. In contrast, shallow narrow STAs receive pre-treated wastewater that infiltrates higher in the soil profile, which may make them more resilient to climate change. We used intact soil mesocosms to quantify the water quality functions of a conventional and two types of shallow narrow STAs under present climate (PC; 20°C) and climate change (CC; 25°C, 30 cm elevation in water table). Significantly greater removal of BOD5 was observed under CC for all STA types. Phosphorus removal decreased significantly from 75% (PC) to 66% (CC) in the conventional STA, and from 100% to 71–72% in shallow narrow STAs. No fecal coliform bacteria (FCB) were released under PC, whereas up to 17 and 20 CFU 100 mL-1 were released in conventional and shallow narrow STAs, respectively, under CC. Total N removal increased from 14% (PC) to 19% (CC) in the conventional STA, but decreased in shallow narrow STAs, from 6–7% to less than 3.0%. Differences in removal of FCB and total N were not significant. Leaching of N in excess of inputs was also observed in shallow narrow STAs under CC. Our results indicate that climate change can affect contaminant removal from wastewater, with effects dependent on the contaminant and STA type.


Journal of Environmental Quality | 2014

Mechanisms of ammonium transformation and loss in intermittently aerated leachfield soil.

John T. Richard; David A. Potts; José A. Amador

Optimization of N removal in soil-based wastewater treatment systems requires an understanding of the microbial processes involved in N transformations. We examined the fate of NH in intermittently aerated leachfield mesocosms over a 24-h period. Septic tank effluent (STE) was amended with NHCl to help determine N speciation and distribution in drainage water, soil, and headspace gases. Our results show that 5.7% of the N was found in soil, 10.0% in drainage water, and 84.3% in the gas pool. Ammonium accounted for 41.7% of the soil N pool, followed by NO (29.2%), organic N (21.7%), and microbial biomass N (7.5%). In drainage water, NO constituted ∼80% of the N pool, whereas NH was absent from this pool. Nitrous oxide was the dominant form of N in the gas phase 6 h after addition of NH-amended STE to the mesocosms, after which its mass declined exponentially; by contrast, the mass of N was initially low but increased linearly with time to become the dominant form of N after 24 h. Analysis based on the isotopic enrichment of NO and N indicates that nitrification contributed 98.8 and 23.1% of the NO flux after 6 and 24 h, respectively. Our results show that gaseous losses are the main mechanism for NH removal from wastewater in intermittently aerated soil. In addition, nitrification, which is generally not considered a significant pathway for N loss in soil-based wastewater treatment, is an important source process for NO.


Journal of Environmental Quality | 2015

Bacteria Transport in a Soil-Based Wastewater Treatment System under Simulated Operational and Climate Change Conditions.

Ivan Morales; José A. Amador; Thomas B. Boving

Bacteria removal efficiencies in a conventional soil-based wastewater treatment system (OWTS) have been modeled to elucidate the fate and transport of bacteria under environmental and operational conditions that might be expected under changing climatic conditions. The HYDRUS 2D/3D software was used to model the impact of changing precipitation patterns, bacteria concentrations, hydraulic loading rates (HLRs), and higher subsurface temperatures at different depths and soil textures. Modeled effects of bacteria concentration shows that greater depth of treatment was required in coarser soils than in fine-textured ones to remove . The initial removal percentage was higher when HLR was lower, but it was greater when HLR was higher. When a biomat layer was included in the transport model, the performance of the system improved by up to 12.0%. Lower bacteria removal (<5%) was observed at all depths under the influence of precipitation rates ranging from 5 to 35 cm, and 35-cm rainfall combined with a 70% increase in HLR. Increased subsurface temperature (23°C) increased bacteria removal relative to a lower temperature range (5-20°C). Our results show that the model is able to effectively simulate bacteria removal and the effect of precipitation and temperature in different soil textures. It appears that the performance of OWTS may be impacted by changing climate.

Collaboration


Dive into the José A. Amador's collaboration.

Top Co-Authors

Avatar

Josef H. Görres

University of Rhode Island

View shared research outputs
Top Co-Authors

Avatar
Top Co-Authors

Avatar
Top Co-Authors

Avatar

George Loomis

University of Rhode Island

View shared research outputs
Top Co-Authors

Avatar

Janet A. Atoyan

University of Rhode Island

View shared research outputs
Top Co-Authors

Avatar
Top Co-Authors

Avatar
Top Co-Authors

Avatar

David Sotomayor-Ramírez

University of Puerto Rico at Mayagüez

View shared research outputs
Top Co-Authors

Avatar
Top Co-Authors

Avatar

Ivan Morales

University of Rhode Island

View shared research outputs
Researchain Logo
Decentralizing Knowledge