Network


Latest external collaboration on country level. Dive into details by clicking on the dots.

Hotspot


Dive into the research topics where Joshua S. Shimony is active.

Publication


Featured researches published by Joshua S. Shimony.


The New England Journal of Medicine | 2011

Detection of Blast-Related Traumatic Brain Injury in U.S. Military Personnel

Christine L. Mac Donald; Ann Johnson; Dana S Cooper; Elliot C. Nelson; Nicole J. Werner; Joshua S. Shimony; Abraham Z. Snyder; Marcus E. Raichle; John R Witherow; Raymond Fang; Stephen F. Flaherty; David L. Brody

BACKGROUND Blast-related traumatic brain injuries have been common in the Iraq and Afghanistan wars, but fundamental questions about the nature of these injuries remain unanswered. METHODS We tested the hypothesis that blast-related traumatic brain injury causes traumatic axonal injury, using diffusion tensor imaging (DTI), an advanced form of magnetic resonance imaging that is sensitive to axonal injury. The subjects were 63 U.S. military personnel who had a clinical diagnosis of mild, uncomplicated traumatic brain injury. They were evacuated from the field to the Landstuhl Regional Medical Center in Landstuhl, Germany, where they underwent DTI scanning within 90 days after the injury. All the subjects had primary blast exposure plus another, blast-related mechanism of injury (e.g., being struck by a blunt object or injured in a fall or motor vehicle crash). Controls consisted of 21 military personnel who had blast exposure and other injuries but no clinical diagnosis of traumatic brain injury. RESULTS Abnormalities revealed on DTI were consistent with traumatic axonal injury in many of the subjects with traumatic brain injury. None had detectable intracranial injury on computed tomography. As compared with DTI scans in controls, the scans in the subjects with traumatic brain injury showed marked abnormalities in the middle cerebellar peduncles (P<0.001), in cingulum bundles (P=0.002), and in the right orbitofrontal white matter (P=0.007). In 18 of the 63 subjects with traumatic brain injury, a significantly greater number of abnormalities were found on DTI than would be expected by chance (P<0.001). Follow-up DTI scans in 47 subjects with traumatic brain injury 6 to 12 months after enrollment showed persistent abnormalities that were consistent with evolving injuries. CONCLUSIONS DTI findings in U.S. military personnel support the hypothesis that blast-related mild traumatic brain injury can involve axonal injury. However, the contribution of primary blast exposure as compared with that of other types of injury could not be determined directly, since none of the subjects with traumatic brain injury had isolated primary blast injury. Furthermore, many of these subjects did not have abnormalities on DTI. Thus, traumatic brain injury remains a clinical diagnosis. (Funded by the Congressionally Directed Medical Research Program and the National Institutes of Health; ClinicalTrials.gov number, NCT00785304.).


Cerebral Cortex | 2010

Longitudinal Analysis of Neural Network Development in Preterm Infants

Christopher D. Smyser; Terrie E. Inder; Joshua S. Shimony; Jason Hill; Andrew J. Degnan; Abraham Z. Snyder; Jeffrey J. Neil

Application of resting state functional connectivity magnetic resonance imaging (fcMRI) to the study of prematurely born infants enables assessment of the earliest forms of cerebral connectivity and characterization of its early development in the human brain. We obtained 90 longitudinal fcMRI data sets from a cohort of preterm infants aged from 26 weeks postmenstrual age (PMA) through term equivalent age at PMA-specific time points. Utilizing seed-based correlation analysis, we identified resting state networks involving varied cortical regions, the thalamus, and cerebellum. Identified networks demonstrated a regionally variable age-specific pattern of development, with more mature forms consisting of localized interhemispheric connections between homotopic counterparts. Anatomical distance was found to play a critical role in the rate of connection development. Prominent differences were noted between networks identified in term control versus premature infants at term equivalent, including in the thalamocortical connections critical for neurodevelopment. Putative precursors of the default mode network were detected in term control infants but were not identified in preterm infants, including those at term equivalent. Identified patterns of network maturation reflect the intricate relationship of structural and functional processes present throughout this important developmental period and are consistent with prior investigations of neurodevelopment in this population.


American Journal of Neuroradiology | 2013

Resting-State fMRI: A Review of Methods and Clinical Applications

Megan H. Lee; Christopher D. Smyser; Joshua S. Shimony

SUMMARY: Resting-state fMRI measures spontaneous low-frequency fluctuations in the BOLD signal to investigate the functional architecture of the brain. Application of this technique has allowed the identification of various RSNs, or spatially distinct areas of the brain that demonstrate synchronous BOLD fluctuations at rest. Various methods exist for analyzing resting-state data, including seed-based approaches, independent component analysis, graph methods, clustering algorithms, neural networks, and pattern classifiers. Clinical applications of resting-state fMRI are at an early stage of development. However, its use in presurgical planning for patients with brain tumor and epilepsy demonstrates early promise, and the technique may have a future role in providing diagnostic and prognostic information for neurologic and psychiatric diseases.


Journal of Neurophysiology | 2008

Intrinsic Functional Relations Between Human Cerebral Cortex and Thalamus

Dongyang Zhang; Abraham Z. Snyder; Michael D. Fox; Mark W. Sansbury; Joshua S. Shimony; Marcus E. Raichle

The brain is active even in the absence of explicit stimuli or overt responses. This activity is highly correlated within specific networks of the cerebral cortex when assessed with resting-state functional magnetic resonance imaging (fMRI) blood oxygen level-dependent (BOLD) imaging. The role of the thalamus in this intrinsic activity is unknown despite its critical role in the function of the cerebral cortex. Here we mapped correlations in resting-state activity between the human thalamus and the cerebral cortex in adult humans using fMRI BOLD imaging. Based on this functional measure of intrinsic brain activity we partitioned the thalamus into nuclear groups that correspond well with postmortem human histology and connectional anatomy inferred from nonhuman primates. This structure/function correspondence in resting-state activity was strongest between each cerebral hemisphere and its ipsilateral thalamus. However, each hemisphere was also strongly correlated with the contralateral thalamus, a pattern that is not attributable to known thalamocortical monosynaptic connections. These results extend our understanding of the intrinsic network organization of the human brain to the thalamus and highlight the potential of resting-state fMRI BOLD imaging to elucidate thalamocortical relationships.


Cerebral Cortex | 2010

Noninvasive Functional and Structural Connectivity Mapping of the Human Thalamocortical System

Dongyang Zhang; Abraham Z. Snyder; Joshua S. Shimony; Michael D. Fox; Marcus E. Raichle

Relating structural connectivity with functional activity is fundamentally important to understanding the brains physiology. The thalamocortical system serves as a good model system for exploring structure/function relationships because of its well-documented anatomical connectivity. Here we performed functional and structural magnetic resonance mapping of the human thalamocortical system using intrinsic brain activity and diffusion-weighted imaging. The accuracy of these imaging techniques is tested by comparison with human histology registered to common anatomical space and connectional anatomy derived from nonhuman primates. In general, there is good overall concordance among structural, functional, and histological results which suggests that a simple model of direct anatomical connectivity between the cerebral cortex and the thalamus is capable of explaining much of the observed correlations in neuronal activity. However, important differences between structural and functional mapping results are also manifest which suggests a more complex interpretation and emphasizes the unique contributions from structural and functional mapping.


The Journal of Neuroscience | 2008

Loss of Resting Interhemispheric Functional Connectivity after Complete Section of the Corpus Callosum

James M. Johnston; S. Neil Vaishnavi; Matthew D. Smyth; Dongyang Zhang; Biyu J. He; John M. Zempel; Joshua S. Shimony; Abraham Z. Snyder; Marcus E. Raichle

Slow (<0.1 Hz), spontaneous fluctuations in the functional magnetic resonance imaging blood oxygen level-dependent (BOLD) signal have been shown to exhibit phase coherence within functionally related areas of the brain. Surprisingly, this phenomenon appears to transcend levels of consciousness. The genesis of coherent BOLD fluctuations remains to be fully explained. We present a resting state functional connectivity study of a 6-year-old child with a radiologically normal brain imaged both before and after complete section of the corpus callosum for the treatment of intractable epilepsy. Postoperatively, there was a striking loss of interhemispheric BOLD correlations with preserved intrahemispheric correlations. These unique data provide important insights into the relationship between connectional anatomy and functional organization of the human brain. Such observations have the potential to increase our understanding of large-scale brain systems in health and disease as well as improve the treatment of neurologic disorders.


Neurology | 2002

A prospective, longitudinal diffusion tensor imaging study of brain injury in newborns

Robert C. McKinstry; Jeffrey H. Miller; Abraham Z. Snyder; Amit Mathur; G. L. Schefft; C. R. Almli; Joshua S. Shimony; S. I. Shiran; Jeffrey J. Neil

Objective To establish the magnitude and time course of the changes in water diffusion coefficient (Dav) following newborn infant brain injury. Methods Ten newborn infants at high risk for perinatal brain injury were recruited from the neonatal intensive care unit. Conventional and diffusion tensor MRI was performed on three occasions during the first week of life. Regions of injury were determined by evaluating conventional MR images (T1, T2, fluid-attenuated inversion recovery) at 1 week after injury. Dav values were determined for these regions for all three scans. Results Dav values were decreased in most infants 1 day after injury, but injury was not evident or underestimated in 4 of 10 infants despite the presence of injury on conventional imaging at 1 week. By the third day, Dav values were decreased in injured areas in all infants, reaching a nadir of approximately 35% less than normal values. By the seventh day after injury, Dav values were returning to normal (pseudonormalization). Conclusions MR diffusion images (for which contrast is determined by changes in Dav) obtained on the first day after injury do not necessarily show the full extent of ultimate injury in newborn infants. Images obtained between the second and fourth days of life reliably indicate the extent of injury. By the seventh day, diffusion MR is less sensitive to perinatal brain injury than conventional MR because of transient pseudonormalization of Dav. Overall, diffusion MR may not be suitable as a gold standard for detection of brain injury during the first day after injury in newborn infants.


Neurosurgery | 2009

Preoperative Sensorimotor Mapping in Brain Tumor Patients Using Spontaneous Fluctuations in Neuronal Activity Imaged With Functional Magnetic Resonance Imaging: Initial Experience

Dongyang Zhang; James M. Johnston; Michael D. Fox; Eric C. Leuthardt; Robert L. Grubb; Michael R. Chicoine; Matthew D. Smyth; Abraham Z. Snyder; Marcus E. Raichle; Joshua S. Shimony

OBJECTIVE To describe initial experience with resting-state correlation mapping as a potential aid for presurgical planning of brain tumor resection. METHODS Resting-state blood oxygenation-dependent functional magnetic resonance imaging (fMRI) scans were acquired in 17 healthy young adults and 4 patients with brain tumors invading sensorimotor cortex. Conventional fMRI motor mapping (finger-tapping protocol) was also performed in the patients. Intraoperatively, motor hand area was mapped using cortical stimulation. RESULTS Robust and consistent delineation of sensorimotor cortex was obtained using the resting-state blood oxygenation-dependent data. Resting-state functional mapping localized sensorimotor areas consistent with cortical stimulation mapping and in all patients performed as well as or better than task-based fMRI. CONCLUSION Resting-state correlation mapping is a promising tool for reliable functional localization of eloquent cortex. This method compares well with “gold standard” cortical stimulation mapping and offers several advantages compared with conventional motor mapping fMRI.


Biological Psychiatry | 2009

Diffuse Microstructural Abnormalities of Normal-Appearing White Matter in Late Life Depression: A Diffusion Tensor Imaging Study

Joshua S. Shimony; Yvette I. Sheline; Gina D'Angelo; Adrian A. Epstein; Tammie L.S. Benzinger; Mark A. Mintun; Robert C. McKinstry; Abraham Z. Snyder

BACKGROUND Many recent studies have identified white matter abnormalities in late life depression (LLD). These abnormalities include an increased volume of discrete white matter hyperintensities on T2-weighted imaging (WMH) and changes in the diffusion tensor properties of water. However, no study of LLD to date has examined the integrity of white matter outside of WMH (i.e., in normal-appearing white matter). METHODS We performed T1- and T2-weighted imaging as well as diffusion tensor imaging (DTI) in depressed elderly subjects (n = 73) and nondepressed control subjects (n = 23) matched for age and cerebrovascular risk factors. The structural images were segmented into white matter, gray matter, cerebrospinal fluid, and WMH. The DTI parameters were calculated in white matter regions of interest after excluding the WMH. RESULTS Compared with control subjects, in the LLD group there were widespread abnormalities in DTI parameters, particularly in prefrontal regions. From a comprehensive neuropsychological battery, the strongest correlations were observed between cognitive processing speed and DTI abnormalities. CONCLUSIONS These results suggest that further investigation is warranted to determine potential reversibility and/or prognosis in LLD.


Proceedings of the National Academy of Sciences of the United States of America | 2011

Resting-state activity in development and maintenance of normal brain function

Carolyn Pizoli; Manish N. Shah; Abraham Z. Snyder; Joshua S. Shimony; David D. Limbrick; Marcus E. Raichle; Bradley L. Schlaggar; Matthew D. Smyth

One of the most intriguing recent discoveries concerning brain function is that intrinsic neuronal activity manifests as spontaneous fluctuations of the blood oxygen level–dependent (BOLD) functional MRI signal. These BOLD fluctuations exhibit temporal synchrony within widely distributed brain regions known as resting-state networks. Resting-state networks are present in the waking state, during sleep, and under general anesthesia, suggesting that spontaneous neuronal activity plays a fundamental role in brain function. Despite its ubiquitous presence, the physiological role of correlated, spontaneous neuronal activity remains poorly understood. One hypothesis is that this activity is critical for the development of synaptic connections and maintenance of synaptic homeostasis. We had a unique opportunity to test this hypothesis in a 5-y-old boy with severe epileptic encephalopathy. The child developed marked neurologic dysfunction in association with a seizure disorder, resulting in a 1-y period of behavioral regression and progressive loss of developmental milestones. His EEG showed a markedly abnormal pattern of high-amplitude, disorganized slow activity with frequent generalized and multifocal epileptiform discharges. Resting-state functional connectivity MRI showed reduced BOLD fluctuations and a pervasive lack of normal connectivity. The child underwent successful corpus callosotomy surgery for treatment of drop seizures. Postoperatively, the patients behavior returned to baseline, and he resumed development of new skills. The waking EEG revealed a normal background, and functional connectivity MRI demonstrated restoration of functional connectivity architecture. These results provide evidence that intrinsic, coherent neuronal signaling may be essential to the development and maintenance of the brains functional organization.

Collaboration


Dive into the Joshua S. Shimony's collaboration.

Top Co-Authors

Avatar

Abraham Z. Snyder

Washington University in St. Louis

View shared research outputs
Top Co-Authors

Avatar

Eric C. Leuthardt

Washington University in St. Louis

View shared research outputs
Top Co-Authors

Avatar

Robert C. McKinstry

Washington University in St. Louis

View shared research outputs
Top Co-Authors

Avatar

David D. Limbrick

Washington University in St. Louis

View shared research outputs
Top Co-Authors

Avatar

Edward S. Boyden

Massachusetts Institute of Technology

View shared research outputs
Top Co-Authors

Avatar

Robert Langer

Massachusetts Institute of Technology

View shared research outputs
Top Co-Authors

Avatar

Roderick A. Hyde

Lawrence Livermore National Laboratory

View shared research outputs
Top Co-Authors

Avatar

Tammie L.S. Benzinger

Washington University in St. Louis

View shared research outputs
Top Co-Authors

Avatar

Terence M. Myckatyn

Washington University in St. Louis

View shared research outputs
Researchain Logo
Decentralizing Knowledge