Judith E. Sutherland

A NEW LOOK AT AN ANCIENT ORDER: GENERIC REVISION OF THE BANGIALES (RHODOPHYTA)†

The red algal order Bangiales has been revised as a result of detailed regional studies and the development of expert local knowledge of Bangiales floras, followed by collaborative global analyses based on wide taxon sampling and molecular analyses. Combined analyses of the nuclear SSU rRNA gene and the plastid RUBISCO LSU (rbcL) gene for 157 Bangiales taxa have been conducted. Fifteen genera of Bangiales, seven filamentous and eight foliose, are recognized. This classification includes five newly described and two resurrected genera. This revision constitutes a major change in understanding relationships and evolution in this order. The genus Porphyra is now restricted to five described species and a number of undescribed species. Other foliose taxa previously placed in Porphyra are now recognized to belong to the genera Boreophyllum gen. nov., Clymene gen. nov., Fuscifolium gen. nov., Lysithea gen. nov., Miuraea gen. nov., Pyropia, and Wildemania. Four of the seven filamentous genera recognized in our analyses already have generic names (Bangia, Dione, Minerva, and Pseudobangia), and are all currently monotypic. The unnamed filamentous genera are clearly composed of multiple species, and few of these species have names. Further research is required: the genus to which the marine taxon Bangia fuscopurpurea belongs is not known, and there are also a large number of species previously described as Porphyra for which nuclear SSU ribosomal RNA (nrSSU) or rbcL sequence data should be obtained so that they can be assigned to the appropriate genus.

A NEW LOOK AT AN ANCIENT ORDER: GENERIC REVISION OF THE BANGIALES (RHODOPHYTA)(1).

The red algal order Bangiales has been revised as a result of detailed regional studies and the development of expert local knowledge of Bangiales floras, followed by collaborative global analyses based on wide taxon sampling and molecular analyses. Combined analyses of the nuclear SSU rRNA gene and the plastid RUBISCO LSU (rbcL) gene for 157 Bangiales taxa have been conducted. Fifteen genera of Bangiales, seven filamentous and eight foliose, are recognized. This classification includes five newly described and two resurrected genera. This revision constitutes a major change in understanding relationships and evolution in this order. The genus Porphyra is now restricted to five described species and a number of undescribed species. Other foliose taxa previously placed in Porphyra are now recognized to belong to the genera Boreophyllum gen. nov., Clymene gen. nov., Fuscifolium gen. nov., Lysithea gen. nov., Miuraea gen. nov., Pyropia, and Wildemania. Four of the seven filamentous genera recognized in our analyses already have generic names (Bangia, Dione, Minerva, and Pseudobangia), and are all currently monotypic. The unnamed filamentous genera are clearly composed of multiple species, and few of these species have names. Further research is required: the genus to which the marine taxon Bangia fuscopurpurea belongs is not known, and there are also a large number of species previously described as Porphyra for which nuclear SSU ribosomal RNA (nrSSU) or rbcL sequence data should be obtained so that they can be assigned to the appropriate genus.

A new look at an ancient order: generic revision of the Bangiales

The red algal order Bangiales has been revised as a result of detailed regional studies and the development of expert local knowledge of Bangiales floras, followed by collaborative global analyses based on wide taxon sampling and molecular analyses. Combined analyses of the nuclear SSU rRNA gene and the plastid RUBISCO LSU (rbcL) gene for 157 Bangiales taxa have been conducted. Fifteen genera of Bangiales, seven filamentous and eight foliose, are recognized. This classification includes five newly described and two resurrected genera. This revision constitutes a major change in understanding relationships and evolution in this order. The genus Porphyra is now restricted to five described species and a number of undescribed species. Other foliose taxa previously placed in Porphyra are now recognized to belong to the genera Boreophyllum gen. nov., Clymene gen. nov., Fuscifolium gen. nov., Lysithea gen. nov., Miuraea gen. nov., Pyropia, and Wildemania. Four of the seven filamentous genera recognized in our analyses already have generic names (Bangia, Dione, Minerva, and Pseudobangia), and are all currently monotypic. The unnamed filamentous genera are clearly composed of multiple species, and few of these species have names. Further research is required: the genus to which the marine taxon Bangia fuscopurpurea belongs is not known, and there are also a large number of species previously described as Porphyra for which nuclear SSU ribosomal RNA (nrSSU) or rbcL sequence data should be obtained so that they can be assigned to the appropriate genus.

Multi-gene phylogenetic analyses of New Zealand coralline algae: Corallinapetra Novaezelandiae gen. et sp. nov. and recognition of the Hapalidiales ord. nov.

Coralline red algae from the New Zealand region were investigated in a study focused on documenting regional diversity. We present a multi‐gene analysis using sequence data obtained for four genes (nSSU, psaA, psbA, rbcL) from 68 samples. The study revealed cryptic diversity at both genus and species levels, confirming and providing further evidence of problems with current taxonomic concepts in the Corallinophycidae. In addition, a new genus Corallinapetra novaezelandiae gen. et sp. nov. is erected for material from northern New Zealand. Corallinapetra is excluded from all currently recognized families and orders within the Corallinophycidae and thus represents a previously unrecognized lineage within this subclass. We discuss rank in the Corallinophycidae and propose the order Hapalidiales.

Diversity of bladed Bangiales (Rhodophyta) in western Mediterranean: recognition of the genus Themis and descriptions of T. ballesterosii sp. nov., T. iberica sp. nov., and Pyropia parva sp. nov.

The diversity of the bladed species of the red algal order Bangiales from the Iberian Mediterranean shores has been reassessed after a detailed study of this region. Prior to this study, 11 bladed species of Bangiales had been reported from Mediterranean waters: Porphyra atropurpurea, P. cordata, P. coriacea, P. dioica, P. linearis, P. purpurea, P. umbilicalis, Pyropia leucosticta, Pyropia koreana (as P. olivii), Py. elongata (as P. rosengurttii) and Py. suborbiculata. A combined analysis of the nuclear nSSU and the plastid rbcL genes together with detailed morphological studies has confirmed the presence of species within the genera Porphyra and Pyropia and also revealed a third, undescribed genus, Themis gen. nov. Porphyra linearis, Pyropia elongata and the introduced Pyropia koreana had been previously listed for the Mediterranean and were recorded in this study. An additional four species, including the introduced Pyropia suborbiculata and three new species: Pyropia parva sp. nov., Themis ballesterosii sp. nov., and Themis iberica sp. nov. were also observed. Hence, most of the Porphyra species traditionally reported along these shores were not reported in this survey. This new floristic Bangiales composition confirms the importance of the Mediterranean basin as a hotspot for biodiversity, possible endemics of ancient origin and high proportion of introductions. Our data also continue to confirm the extent of Bangiales diversity at regional and worldwide levels.

UV-B radiation induces changes in polyamine metabolism in the red seaweed Porphyra cinnamomea

Early investigations on the productivity of intertidal seaweeds found that, unlike some seaweeds, members of the genus Porphyra, a Rhodophyte, could tolerate physical stressors such as ultraviolet-B radiation (UV-B) both during immersion and when exposed to air. Increased stress tolerance was thought to be due to an unknown mechanism that operated at the thylakoid level. As recent research has shown that polyamines (PAs), bound to the thylakoid membranes of chloroplasts, play a critical role in protecting the photosynthetic apparatus from high-light and UV damage in both higher plants and in unicellular algae, we investigated PA metabolism in Porphyra cinnamomea exposed to UV-B. Our results show that PA biosynthesis was significantly upregulated in P. cinnamomea in response to UV-B, with the greatest proportional increases being in bound soluble putrescine (PUT), which increased by over 200%, in bound soluble spermidine (SPD) and spermine (SPM) which both increased by more than 150% and in bound insoluble SPM which increased by more than 120%. As PAs can be synthesised from ornithine via ornithine decarboxylase (ODC) or from arginine via arginine decarboxylase (ADC) we investigated the pathway via which polyamines were synthesised in P. cinnamomea. While exposure to UV-B caused increases in the activities of both ADC and ODC, the increase in ADC activity was 10 fold greater than that of ODC, suggesting that the ADC pathway was the principle route by which PA levels increased in response to UV-B. Mechanisms of PA mediated UV-B protection are discussed.

Regulation of polyamine metabolism in Pyropia cinnamomea (W.A. Nelson), an important mechanism for reducing UV-B-induced oxidative damage

It is generally accepted that ultraviolet (UV) radiation can have adverse affects on phototrophic organisms, independent of ozone depletion. The red intertidal seaweed Pyropia cinnamomea W.A. Nelson (previously Porphyra cinnamomea Sutherland et al. 2011), similar to many other intertidal macrophytes, is exposed to high levels of UV radiation on a daily basis due to emersion in the upper littoral zone. It has been shown that seaweeds, like higher plants, respond to an increased activity of antioxidative enzymes when exposed to stress. However, earlier investigations have shown that P. cinnamomea also compensates for stress due to UV radiation by increasing polyamine (PA) levels, especially bound‐soluble and bound‐insoluble PAs. The PA precursor putrescine (PUT) can be synthesized via two enzymatic pathways: arginine decarboxylase (ADC) and ornithine decarboxylase (ODC). Both of these enzymes showed increased activity in P. cinnamomea under UV stress. In higher plants, ADC is the enzyme responsible for increased PA levels during stress exposure, while ODC is correlated with cell division and reproduction. However, there are contrary findings in the literature. Using two irreversible inhibitors, we identified the enzyme most likely responsible for increased PUT synthesis and therefore increased stress tolerance in P. cinnamomea. Our results show that changes in the PA synthesis pathway in P. cinnamomea under UV stress are based on an increased activity of ADC. When either inhibitor was added, lipid hydroperoxide levels increased even under photosynthetically active radiation, suggesting that PAs are involved in protection mechanisms under normal light conditions as well. We also show that under optimum or low‐stress conditions, ODC activity is correlated with PUT synthesis.

ANALYSIS OF SPATIAL AND TEMPORAL DIVERSITY AND DISTRIBUTION OF PORPHYRA (RHODOPHYTA) IN SOUTHEASTERN NEW ZEALAND SUPPORTED BY THE USE OF MOLECULAR TOOLS

Molecular studies have shown that New Zealand’s rocky shores are a habitat for >30 species of Porphyra, but little is known of their seasonal and zonal distribution. The spatial and temporal distribution of bladed Porphyra gametophytes at Brighton Beach, southeast New Zealand, were monitored for 32 months. Molecular markers were used for species identification, and a total of nine species was observed as being present during this time. Two species, P. cinnamomea and Porphyra sp. “ROS 54,” were the most common, and both were present for most months, while the remaining seven species were present sporadically, for only a few weeks at a time. P. cinnamomea W. A. Nelson and Porphyra sp. “ROS 54” were most common in the midintertidal, and both showed a similar seasonality with the highest presence during spring. They also showed a similar trend of seasonal dieback resulting in at least 1 month (May) in two consecutive years when they were both absent. This is one of the few studies investigating spatial and temporal distribution within a genus and over a 3‐year period. Our results show no distinct intertidal zonation patterns within the genus, and we conclude that morphologically similar species in a similar habitat rely on physiological mechanisms for survival.

Neither Callophyllis nor Gelidium: Blastophyllis gen. nov. and Zuccarelloa gen. nov. (Kallymeniaceae, Rhodophyta) for three New Zealand species

Abstract: Studies of New Zealand Kallymeniaceae have revealed a great deal of diversity, providing new perspectives on relationships within the family and necessitating the establishment of new genera. Based on rbcL, cytochrome c oxidase subunit 1 (COI), psbA sequence analyses and morphological observations, we reassessed the phylogenetic relationships of three endemic species from southern New Zealand. A new genus, Blastophyllis, was established to accommodate two distinctive species, currently known as Callophyllis hombroniana and Callophyllis calliblepharoides. Phylogenetic analyses revealed that these species were distantly related to Callophyllis sensu stricto, including the generitype Callophyllis variegata from Chile. Blastophyllis had compressed thalli consisting of branches with short side proliferations and protruding cystocarps developed on the lateral proliferations. Zuccarelloa gen. nov. was established to accommodate a peculiar species erroneously referred to the genus Gelidium, as Gelidium ceramoides. Zuccarelloa was different from every other genus in the Kallymeniaceae, having filiform thalli, small roundish cell, resembling rhizines, intermixed with large medullary cells and reproductive structures confined to swollen apical parts, similar to sori in Gelidium. A sister relationship between these two new genera was recovered in the concatenated COI-rbcL analysis and in both COI and rbcL single gene analyses, albeit with only moderate support. This relationship was not recovered in analyses of the less variable psbA dataset, which also failed to resolve some other relationships within the Kallymeniaceae.

First record of the genus Dudresnaya (Dumontiaceae, Rhodophyta) in New Zealand waters

The genus Dudresnaya is reported for the first time in New Zealand waters. Samples were collected in Bay of Islands, northern New Zealand, on rhodolith beds and at the edge of a rocky reef, between −5 and −10 m depth. The species was identified by morphological and anatomical characters as Dudresnaya capricornica and its identity was confirmed by molecular sequence data. This species is characterized by terete radial branches, outer cortical cells cylindrical, presence of hexagonal crystals, lack of annulation and mucilage coat on auxiliary cell branches, oblique division of carpogonium and cystocarps no cleft. The rbcL phylogenetic analysis showed the genus Dudresnaya is strongly supported and sister to taxa in the family Dumontiaceae. This family is also closely related to the families Rhizophillidaceae and Kallymeniaceae. This is the first record of the family Dumontiaceae in New Zealand.