Juliane Bendig

Estimating Biomass of Barley Using Crop Surface Models (CSMs) Derived from UAV-Based RGB Imaging

Crop monitoring is important in precision agriculture. Estimating above-ground biomass helps to monitor crop vitality and to predict yield. In this study, we estimated fresh and dry biomass on a summer barley test site with 18 cultivars and two nitrogen (N)-treatments using the plant height (PH) from crop surface models (CSMs). The super-high resolution, multi-temporal (1 cm/pixel) CSMs were derived from red, green, blue (RGB) images captured from a small unmanned aerial vehicle (UAV). Comparison with PH reference measurements yielded an R2 of 0.92. The test site with different cultivars and treatments was monitored during “Biologische Bundesanstalt, Bundessortenamt und CHemische Industrie” (BBCH) Stages 24–89. A high correlation was found between PH from CSMs and fresh biomass (R2 = 0.81) and dry biomass (R2 = 0.82). Five models for above-ground fresh and dry biomass estimation were tested by cross-validation. Modelling biomass between different N-treatments for fresh biomass produced the best results (R2 = 0.71). The main limitation was the influence of lodging cultivars in the later growth stages, producing irregular plant heights. The method has potential for future application by non-professionals, i.e., farmers.

Toward an automated low-cost three-dimensional crop surface monitoring system using oblique stereo imagery from consumer-grade smart cameras

Abstract. Crop surface models (CSMs) representing plant height above ground level are a useful tool for monitoring in-field crop growth variability and enabling precision agriculture applications. A semiautomated system for generating CSMs was implemented. It combines an Android application running on a set of smart cameras for image acquisition and transmission and a set of Python scripts automating the structure-from-motion (SfM) software package Agisoft Photoscan and ArcGIS. Only ground-control-point (GCP) marking was performed manually. This system was set up on a barley field experiment with nine different barley cultivars in the growing period of 2014. Images were acquired three times a day for a period of two months. CSMs were successfully generated for 95 out of 98 acquisitions between May 2 and June 30. The best linear regressions of the CSM-derived plot-wise averaged plant-heights compared to manual plant height measurements taken at four dates resulted in a coefficient of determination R2 of 0.87 and a root-mean-square error (RMSE) of 0.08 m, with Willmott’s refined index of model performance dr equaling 0.78. In total, 103 mean plot heights were used in the regression based on the noon acquisition time. The presented system succeeded in semiautomatedly monitoring crop height on a plot scale to field scale.