Julie M. Rose

Pathways between Primary Production and Fisheries Yields of Large Marine Ecosystems

The shift in marine resource management from a compartmentalized approach of dealing with resources on a species basis to an approach based on management of spatially defined ecosystems requires an accurate accounting of energy flow. The flow of energy from primary production through the food web will ultimately limit upper trophic-level fishery yields. In this work, we examine the relationship between yield and several metrics including net primary production, chlorophyll concentration, particle-export ratio, and the ratio of secondary to primary production. We also evaluate the relationship between yield and two additional rate measures that describe the export of energy from the pelagic food web, particle export flux and mesozooplankton productivity. We found primary production is a poor predictor of global fishery yields for a sample of 52 large marine ecosystems. However, chlorophyll concentration, particle-export ratio, and the ratio of secondary to primary production were positively associated with yields. The latter two measures provide greater mechanistic insight into factors controlling fishery production than chlorophyll concentration alone. Particle export flux and mesozooplankton productivity were also significantly related to yield on a global basis. Collectively, our analyses suggest that factors related to the export of energy from pelagic food webs are critical to defining patterns of fishery yields. Such trophic patterns are associated with temperature and latitude and hence greater yields are associated with colder, high latitude ecosystems.

A role for shellfish aquaculture in coastal nitrogen management.

Excess nutrients in the coastal environment have been linked to a host of environmental problems, and nitrogen reduction efforts have been a top priority of resource managers for decades. The use of shellfish for coastal nitrogen remediation has been proposed, but formal incorporation into nitrogen management programs is lagging. Including shellfish aquaculture in existing nitrogen management programs makes sense from environmental, economic, and social perspectives, but challenges must be overcome for large-scale implementation to be possible.

Comparative analysis of modeled nitrogen removal by shellfish farms

The use of shellfish aquaculture for nutrient removal and reduction of coastal eutrophication has been proposed. Published literature has indicated that nitrogen contained in harvested shellfish can be accurately estimated from shell length:nitrogen content ratios. The range of nitrogen that could be removed by a typical farm in a specific estuarine or coastal setting is also of interest to regulators and planners. Farm Aquaculture Resource Management (FARM) model outputs of nitrogen removal at the shellfish farm scale have been summarized here, from 14 locations in 9 countries across 4 continents. Modeled nitrogen removal ranged from 105 lbs acre(-1) year(-1) (12 g m(-2) year(-1)) to 1356 lbs acre(-1) year(-1) (152 g m(-2) year(-1)). Mean nitrogen removal was 520 lbs acre(-1) year(-1) (58 g m(-2) year(-1)). These model results are site-specific in nature, but compare favorably to reported nitrogen removal effectiveness of agricultural best management practices and stormwater control measures.

Antarctic mixotrophic protist abundances by microscopy and molecular methods

Protists are traditionally described as either phototrophic or heterotrophic, but studies have indicated that mixotrophic species, organisms that combine both strategies, can have significant impacts on prey populations in marine microbial food webs. While estimates of active mixotroph abundances in environmental samples are determined microscopically by fluorescent particle ingestion, species identification is difficult. We developed SYBR-based qPCR strategies for three Antarctic algal species that we identified as mixotrophic. This method and traditional ingestion experiments were applied to determine the total mixotroph abundance in Antarctic water samples, to ascertain the abundance of known mixotrophic species, and to identify environmental variables that impact the distribution and abundance of these species. Despite differences in sampling locations and years, mixotroph distribution was strongly influenced by season. Environmental variables that best explained variation in the individual mixotroph species abundances included temperature, oxygen, date, fluorescence, conductivity, and latitude. Phosphate was identified as an additional explanatory variable when nutrients were included in the analysis. Utilizing culture-based grazing rates and qPCR abundances, the estimated summed impact on bacterial populations by the three mixotrophs was usually < 2% of the overall mixotrophic grazing, but in one sample, Pyramimonas was estimated to contribute up to 80% of mixotrophic grazing.

Transplant experiment to evaluate the feeding behaviour of the Atlantic ribbed mussel, Geukensia demissa, moved to a high inorganic seston area

In 2011–12, a field study demonstrated that ribbed mussels from two locations in the north-east Atlantic Coast of the USA used different feeding strategies to adapt to widely differing seston characteristics and achieve the same absorption efficiency. To investigate whether there was local, genetic adaptation of mussels in the two contrasting sites, we conducted a transplant experiment in 2012 in which mussels were moved from the high-plankton, low-inorganic waters of Milford Harbor, CT, to the high-inorganic, low-plankton waters of Hunts Point, Bronx, NY. Results showed that mussels from Milford adapted to the new, poorer-quality seston within 6 days of submersion in Hunts Point waters, which indicates that phenotypic plasticity in the species is sufficient to account for adaptability of the ribbed mussel to Hunts Point conditions. This adaptability makes the ribbed mussel a good candidate for environmental remediation technologies, such as nutrient bioextraction.

Benthic Ecology of Northern Quahog Beds with Different Hydraulic Dredging Histories in Long Island Sound

ABSTRACT Mercaldo-Allen, R.; Goldberg, R.; Clark, P.; Kuropat, C.; Meseck, S.L., and Rose, J.M., 2016. Benthic ecology of northern quahog beds with different hydraulic dredging histories in Long Island Sound. This paper evaluates benthic community composition of four shellfish beds in Long Island Sound near Milford, Connecticut, where northern quahog or hard clams, Mercenaria mercenaria (Linnaeus 1758), were harvested by hydraulic dredge. These leased beds reflect a variety of dredging histories; 0 year (dredged just before sampling began), 1 year postharvest, 2 years postharvest, and an inactive clam bed left fallow for at least 10 years. Benthic sediment was sampled at 1- to 2-week intervals from June to October 2011 using a Smith–McIntyre grab. Benthic community composition was significantly influenced by dredging history and sampling month. Abundance of benthic organisms (number of individuals and biovolume) and total organic matter concentrations were significantly greater at the 0-year site than at the 1-, 2-, and 10+-year sites, and significantly greater at the 1- and 2-year sites than at the 10+-site. Newly settled bivalves, primarily Nucula spp. and Yoldia limulata, were significantly more prevalent on the recently harvested 0-, 1-, and 2-year sites vs. the 10+-year site and highest at the 0-year site. A significantly greater number of species was observed on the 1- and 2-year sites vs. the 0- and 10+-year locations. Species richness at the 0-year site was significantly lower than at the 1-, 2-, and 10+-year sites, whereas diversity and evenness at the 0-year site was significantly lower than at the 10+-year site. This study observed successional changes in community structure of inshore clam beds related to the length of time elapsed after harvest dredging.

Design and Use of an Apparatus for Quantifying Bivalve Suspension Feeding at Sea

As shellfish aquaculture moves from coastal embayments and estuaries to offshore locations, the need to quantify ecosystem interactions of farmed bivalves (i.e., mussels, oysters, and clams) presents new challenges. Quantitative data on the feeding behavior of suspension-feeding mollusks is necessary to determine important ecosystem interactions of offshore shellfish farms, including their carrying capacity, the competition with the zooplankton community, the availability of trophic resources at different depths, and the deposition to the benthos. The biodeposition method is used to quantify feeding variables in suspension-feeding bivalves in a natural setting and represents a more realistic proxy than laboratory experiments. This method, however, relies upon a stable platform to satisfy the requirements that water flow rates supplied to the shellfish remain constant and the bivalves are undisturbed. A flow-through device and process for using the biodeposition method to quantify the feeding of bivalve mollusks were modified from a land-based format for shipboard use by building a two-dimensional gimbal table around the device. Planimeter data reveal a minimal pitch and yaw of the chambers containing the test shellfish despite boat motion, the flow rates within the chambers remain constant, and operators are able to collect the biodeposits (feces and pseudofeces) with sufficient consistency to obtain accurate measurements of the bivalve clearance, filtration, selection, ingestion, rejection, and absorption at offshore shellfish aquaculture sites.

Cultivation of the Ribbed Mussel (Geukensia demissa) for Nutrient Bioextraction in an Urban Estuary

Shellfish aquaculture is gaining acceptance as a tool to reduce nutrient over enrichment in coastal and estuarine ecosystems through the feeding activity of the animals and assimilation of filtered particles in shellfish tissues. This ecosystem service, provided by the ribbed mussel (Geukensia demissa), was studied in animals suspended from a commercial mussel raft in the urban Bronx River Estuary, NY, in waters closed to shellfish harvest due to bacterial contamination. Naturally occurring populations of ribbed mussels were observed to be healthy and resilient in this highly urbanized environment. Furthermore, mussels grown suspended in the water column contained substantially lower concentrations of heavy metals and organic contaminants in their tissues than blue mussels (Mytilus edulis) collected at a nearby benthic site. Spat collection efforts from shore and within the water column were unsuccessful; this was identified as a key bottleneck to future large-scale implementation. Filtration experiments indicated that a fully stocked G. demissa raft would clear an average 1.2 × 107 L of Bronx River Estuary water daily, removing 160 kg of particulate matter from the water column, of which 12 kg would be absorbed into mussel digestive systems. At harvest, 62.6 kg of nitrogen would be sequestered in mussel tissue and shell. These values compare favorably to other resource management recovery methods targeting agricultural and stormwater nitrogen sources.

Correction to: Effects of clam dredging on benthic ecology of two cultivated northern quahog beds with different harvest histories and sediment grain sizes

The original version of this article unfortunately contained an error where the symbol for phi size was inadvertently omitted from the text.

Direct measurements of the nutrient management potential of ribbed mussels, Geukensia demissa, at two sites in upper Narragansett Bay, Rhode Island

Joint Meeting of the Northeast Aquaculture Conference and Exposition and the 35th Milford Aquaculture Seminar, 14-16 January 2015, Portland, Maine