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Dive into the research topics where Jun Ishibashi is active.

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Featured researches published by Jun Ishibashi.


Insect Biochemistry and Molecular Biology | 2008

A genome-wide analysis of genes and gene families involved in innate immunity of Bombyx mori

Hiromitsu Tanaka; Jun Ishibashi; Kosuke Fujita; Yoshiro Nakajima; Aki Sagisaka; Kazuya Tomimoto; Noriko Suzuki; Mikio Yoshiyama; Yoichi Kaneko; Takashi Iwasaki; Tomoya Sunagawa; Kayoko Yamaji; Ai Asaoka; Kazuei Mita; Minoru Yamakawa

A genome-wide analysis of innate immunity-related genes and gene families was conducted using the silkworm, Bombyx mori. We identified orthologs for a large number of genes involved in insect immunity that have been reported from Drosophila melanogaster (Diptera), Anopheles gambiae (Diptera), Apis mellifera (Hymenoptera) and Tribolium castaneum (Coleoptera). B. mori has a unique recognition gene and antimicrobial peptide genes that are not present in the Drosophila, Anopheles, Apis and Tribolium genomes, suggesting a lineage-specific gene evolution for lepidopteran insects. The comparative analysis of the insect immune repertoires indicated a dynamic and flexible gene expansion in recognition, modulation and effector mechanisms due to different selection pressures. Differential gene regulation by different bacterial species was found in PGRP and Serpin genes, suggesting that Bombyx has a highly selective gene regulation system depending on bacterial species.


Journal of Virology | 2003

A Lipase Isolated from the Silkworm Bombyx mori Shows Antiviral Activity against Nucleopolyhedrovirus

Kangayam M. Ponnuvel; Hiroshi Nakazawa; Seiichi Furukawa; Ai Asaoka; Jun Ishibashi; Hiromitsu Tanaka; Minoru Yamakawa

ABSTRACT A protein showing strong antiviral activity against Bombyx mori nucleopolyhedrovirus (BmNPV) was purified from the digestive juice of B. mori larvae. A homology search of the deduced amino acid sequence of the protein cDNA revealed 56% homology with Drosophila melanogaster lipase and 21% homology with human lipase. As lipase activity of the protein was confirmed in vitro, this protein was designated Bmlipase-1. Northern blot analysis showed that the Bmlipase-1 gene is expressed in the midgut but not in other tissues, nor is it activated by BmNPV infection. In addition, the Bmlipase-1 gene was shown not to be expressed in the molting and wandering stages, indicating that the gene is hormonally regulated. Our results suggest that an insect digestive enzyme has potential as a physiological barrier against BmNPV at the initial site of viral infection.


Journal of Biological Chemistry | 2009

Functions of Manduca sexta hemolymph proteinases HP6 and HP8 in two innate immune pathways.

Chunju An; Jun Ishibashi; Emily J. Ragan; Haobo Jiang; Michael R. Kanost

Serine proteinases in insect plasma have been implicated in two types of immune responses; that is, activation of prophenoloxidase (proPO) and activation of cytokine-like proteins. We have identified more than 20 serine proteinases in hemolymph of the tobacco hornworm, Manduca sexta, but functions are known for only a few of them. We report here functions of two additional M. sexta proteinases, hemolymph proteinases 6 and 8 (HP6 and HP8). HP6 and HP8 are each composed of an amino-terminal clip domain and a carboxyl-terminal proteinase domain. HP6 is an apparent ortholog of Drosophila Persephone, whereas HP8 is most similar to Drosophila and Tenebrio spätzle-activating enzymes, all of which activate the Toll pathway. proHP6 and proHP8 are expressed constitutively in fat body and hemocytes and secreted into plasma, where they are activated by proteolytic cleavage in response to infection. To investigate activation and biological activity of HP6 and HP8, we purified recombinant proHP8, proHP6, and mutants of proHP6 in which the catalytic serine was replaced with alanine, and/or the activation site was changed to permit activation by bovine factor Xa. HP6 was found to activate proPO-activating proteinase (proPAP1) in vitro and induce proPO activation in plasma. HP6 was also determined to activate proHP8. Active HP6 or HP8 injected into larvae induced expression of antimicrobial peptides and proteins, including attacin, cecropin, gloverin, moricin, and lysozyme. Our results suggest that proHP6 becomes activated in response to microbial infection and participates in two immune pathways; activation of PAP1, which leads to proPO activation and melanin synthesis, and activation of HP8, which stimulates a Toll-like pathway.


Insect Biochemistry and Molecular Biology | 2001

Developmental profile of the changes in the prothoracicotropic hormone titer in hemolymph of the silkworm Bombyx mori : correlation with ecdysteroid secretion

Akira Mizoguchi; Yasutaka Ohashi; Kazutaka Hosoda; Jun Ishibashi; Hiroshi Kataoka

A very sensitive time-resolved fluoroimmunoassay for the prothoracicotropic hormone (PTTH) of the silkworm Bombyx mori has been established. The lower limit of detection in this assay was 0.1 pg. With this assay method, the amounts of PTTH in the central nervous system and hemolymph were quantified. PTTH was detected only in the brain within the central nervous system, and, in the fifth instar, its content in the brain increased gradually with larval growth and decreased rapidly after the beginning of wandering. A substantial amount of PTTH was also found in the retrocerebral complex of day-3 fifth instar larvae, accounting for 28% of total PTTH. The PTTH titer in hemolymph changed dramatically during Bombyx development, with a small peak in the middle of the fourth instar, medium-sized peaks at the wandering and prepupal stages in the fifth instar, and a large prolonged peak during early pupal-adult development. The changes were overall closely correlated with those in hemolymph ecdysteroid titer. However, some unexpected aspects of PTTH dynamics in hemolymph have also been disclosed. Based on these observations, the significance of PTTH secretion in the control of insect development is discussed.


Peptides | 2009

Selective cancer cell cytotoxicity of enantiomeric 9-mer peptides derived from beetle defensins depends on negatively charged phosphatidylserine on the cell surface

Takashi Iwasaki; Jun Ishibashi; Hiromitsu Tanaka; Mitsuru Sato; Ai Asaoka; DeMar Taylor; Minoru Yamakawa

Four enantiomeric 9-mer peptides named d-peptide A, B, C and D were designed and synthesized on the basis of 43-mer insect defensins from two beetles. The d-9-mer peptides maintained bacterial membrane disruptive activity similar to the original peptides and also showed various extents of growth inhibitory activity against different cancer cell lines. Of these peptides, d-peptide B exhibited the highest selective cancer cell cytotoxicity against the mouse myeloma cell line, P3-X63-Ag8.653. Flow cytometric and scanning electron microscopic analysis revealed d-peptide B disrupts mouse myeloma membrane construction, whereas no cytotoxic effect on normal leukocytes was observed. Moreover, a strong correlation between negatively charged phosphatidylserine (PS) density in cancer cell membrane surface and sensitivity to d-9-mer peptides were observed in various cancer cell lines. These results suggest that d-9-mer peptides have negative charge-dependent selective cancer cell cytotoxicity targeting PS in the cancer cell membrane. In addition, synergic growth inhibitory activity against mouse myeloma was observed in combinations of d-peptide B and dexamethasone. These results suggest d-9-mer peptides are promising candidates for novel anticancer drugs.


Virus Research | 2010

Genome-wide analysis of host gene expression in the silkworm cells infected with Bombyx mori nucleopolyhedrovirus.

Aki Sagisaka; Kosuke Fujita; Yuki Nakamura; Jun Ishibashi; Hiroaki Noda; Shigeo Imanishi; Kazuei Mita; Minoru Yamakawa; Hiromitsu Tanaka

The global transcriptional profile of host genes in the silkworm cell line during the early phase of Bombyx mori nucleopolyhedrovirus (BmNPV) infection was analyzed by oligonucleotide microarray. Our analysis showed 35 genes were significantly up-regulated and 17 genes were significantly down-regulated. This is the first report of changes in the expression of these genes in response to NPV infection. We further quantified the levels of mRNA expression by quantitative reverse transcriptase-polymerase chain reaction and confirmed that the expression of 13 (such as BmEts and BmToll10-3) genes significantly increased and 7 genes (such as Hsp20-1) significantly decreased after BmNPV infection. However, the expression levels of most genes were not dramatically changed except BmEts expression increased approximately 8.0-fold 12h after BmNPV infection.


FEBS Letters | 1995

INSECT PROTHORACICOTROPIC HORMONE : A NEW MEMBER OF THE VERTEBRATE GROWTH FACTOR SUPERFAMILY

Tosiyuki Noguti; Takashi Adachi-Yamada; Teruhiko Katagiri; Atsushi Kawakami; Masafumi Iwami; Jun Ishibashi; Hiroshi Kataoka; Akinori Suzuki; Mitiko Gō; Hironori Ishizaki

Prothoracicotropic hormone (PTTH) is a brain neurosecretory protein that controls insect development. PTTH of the silkmoth Bombyx mori is a homodimeric protein, the subunit of which consists of 109 amino acids. Clear‐cut sequence similarity to any other proteins has not been observed. By disulfide‐bond pattern analysis and modeling of the PTTH structure based on the known three‐dimensional (3D) structures of growth factor family with cystine‐knot motif, we propose that the PTTH protomer adopts the fold unique to the structural superfamily of the growth factors, β‐nerve growth factor (β‐NGF), transforming growth factor‐β2 (TGF‐β2), and platelet‐derived growth factor‐BB (PDGF‐BB). The insect neurohormone PTTH appears to be a member of the growth factor superfamily, sharing a common ancestral gene with the three vertebrate growth factors, β‐NGF, TGF‐β2 and PDGF‐BB.


Biochemical Journal | 1999

Synthesis and characterization of bactericidal oligopeptides designed on the basis of an insect anti-bacterial peptide

Hisako Saido-Sakanaka; Jun Ishibashi; Aki Sagisaka; Eiichi Momotani; Minoru Yamakawa

Defensin from a beetle, Allomyrina dichotoma, is known to have anti-bacterial activity against Gram-positive bacteria. This peptide, which comprises 43 amino acid residues, was effective against methicillin-resistant Staphylococcus aureus. We identified the active site of beetle defensin by measuring anti-bacterial activity against S. aureus of 64 overlapping 12-mer peptides with either a free carboxylate or a free amide group at their C-termini. An LCAAHCLAIGRR-NH2 (19L-30R-NH2) fragment showed the greatest activity of the synthetic oligopeptides. The 19L-30R-NH2 fragment was effective against both Gram-positive and Gram-negative bacteria. CD spectra showed that the 19L-30R-NH2 fragment formed an alpha-helical structure in the lipidic environment. The anti-bacterial effect of the 19L-30R-NH2 fragment was due to its interaction with bacterial membranes, judging from the leakage of liposome-entrapped glucose. Its anti-bacterial activity was increased when certain amino acid residues were replaced. Truncated peptides having had some amino acids removed from the N-terminus of the 19L-30R-NH2 fragment (8-10-mer peptides) still had strong anti-bacterial activity. Deleting some amino acids from the C-terminal region of the fragment dramatically reduced activity, indicating that the C-terminal region of the 19L-30R-NH2 fragment, i.e. RR-NH2, is important for exerting anti-bacterial activity. The AHCLAIGRR-NH2 (22A-30R-NH2) fragment and its analogues exhibited about 3-fold and 9-12-fold higher activity against S. aureus than did the 19L-30R-NH2 fragment, and these analogues were effective against methicillin-resistant S. aureus and Pseudomonas aeruginosa isolated from patients. These oligopeptides showed no haemolytic activity and did not inhibit the growth of murine fibroblast cells.


FEBS Letters | 2002

Solution structure of moricin, an antibacterial peptide, isolated from the silkworm Bombyx mori.

Hikaru Hemmi; Jun Ishibashi; Minoru Yamakawa

A novel antibacterial peptide, moricin, isolated from the silkworm Bombyx mori, consists of 42 amino acids. It is highly basic and the amino acid sequence has no significant similarity to those of other antibacterial peptides. The 20 structures of moricin in methanol have been determined from two‐dimensional 1H‐nuclear magnetic resonance spectroscopic data. The solution structure reveals an unique structure comprising of a long α‐helix containing eight turns along nearly the full length of the peptide except for four N‐terminal residues and six C‐terminal residues. The electrostatic surface map shows that the N‐terminal segment of the α‐helix, residues 5–22, is an amphipathic α‐helix with a clear separation of hydrophobic and hydrophilic faces, and that the C‐terminal segment of the α‐helix, residues 23–36, is a hydrophobic α‐helix except for the negatively charged surface at the position of Asp30. The results suggest that the amphipathic N‐terminal segment of the α‐helix is mainly responsible for the increase in permeability of the membrane to kill the bacteria.


Biochemical and Biophysical Research Communications | 2003

Scarabaecin, a novel cysteine-containing antifungal peptide from the rhinoceros beetle, Oryctes rhinoceros.

Tetsuya Tomie; Jun Ishibashi; Seiichi Furukawa; Satoe Kobayashi; Ai Asaoka; Michito Tagawa; Minoru Yamakawa

A novel antifungal peptide, scarabaecin (4080Da), was isolated from the coconut rhinoceros beetle, Oryctes rhinoceros. Scarabaecin cDNA was cloned by reverse transcriptase-polymerase chain reactions (RT-PCR) using a primer based on the N-terminal amino acid sequence. The amino acid sequence deduced from scarabaecin cDNA showed no significant similarity to those of reported proteins. Chemically synthesized scarabaecin indicated antifungal activity against phytopathogenic fungi such as Pyricularia oryzae, Rhizoctonia solani, and Botrytis cinerea, but not against phytopathogenic bacteria. It showed weak activity against Bauberia bassiana, an insect pathogenic fungus, and Staphylococcus aureus, a pathogenic bacterium. Scarabaecin showed chitin binding property and its K(d) was 1.315 microM. A comparison of putative chitin-binding domains among scarabaecin, invertebrate, and plant chitin-binding proteins suggests that scarabaecin is a new member of chitin-binding antimicrobial proteins.

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Aki Sagisaka

National Agriculture and Food Research Organization

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Takashi Iwasaki

National Agriculture and Food Research Organization

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Hiroshi Kataoka

Tokyo University of Agriculture and Technology

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Hiroshi Nakazawa

Kyoto Institute of Technology

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Akinori Suzuki

Akita Prefectural University

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