Kanji Oshima
Osaka University
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Publication
Featured researches published by Kanji Oshima.
PLOS ONE | 2012
Kanji Oshima; Yasunobu Sugimoto; Thomas C. Irving; Katsuzo Wakabayashi
The intensities of the myosin-based layer lines in the x-ray diffraction patterns from live resting frog skeletal muscles with full thick-thin filament overlap from which partial lattice sampling effects had been removed were analyzed to elucidate the configurations of myosin crossbridges around the thick filament backbone to nanometer resolution. The repeat of myosin binding protein C (C-protein) molecules on the thick filaments was determined to be 45.33 nm, slightly longer than that of myosin crossbridges. With the inclusion of structural information for C-proteins and a pre-powerstroke head shape, modeling in terms of a mixed population of regular and perturbed regions of myosin crown repeats along the filament revealed that the myosin filament had azimuthal perturbations of crossbridges in addition to axial perturbations in the perturbed region, producing pseudo-six-fold rotational symmetry in the structure projected down the filament axis. Myosin crossbridges had a different organization about the filament axis in each of the regular and perturbed regions. In the regular region that lacks C-proteins, there were inter-molecular interactions between the myosin heads in axially adjacent crown levels. In the perturbed region that contains C-proteins, in addition to inter-molecular interactions between the myosin heads in the closest adjacent crown levels, there were also intra-molecular interactions between the paired heads on the same crown level. Common features of the interactions in both regions were interactions between a portion of the 50-kDa-domain and part of the converter domain of the myosin heads, similar to those found in the phosphorylation-regulated invertebrate myosin. These interactions are primarily electrostatic and the converter domain is responsible for the head-head interactions. Thus multiple head-head interactions of myosin crossbridges also characterize the switched-off state and have an important role in the regulation or other functions of myosin in thin filament-regulated muscles as well as in the thick filament-regulated muscles.
Advances in Experimental Medicine and Biology | 2007
Katsuzo Wakabayashi; Yasunobu Sugimoto; Yasunori Takezawa; Yutaka Ueno; Shiho Minakata; Kanji Oshima; Tatsuhito Matsuo; Takakazu Kobayashi
Strong evidence has been accumulated that the conformational changes of the thin actin filaments are occurring and playing an important role in the entire process of muscle contraction. The conformational changes and the mechanical properties of the thin actin filaments we have found by X-ray fiber diffraction on skeletal muscle contraction are explored. Recent studies on the conformational changes of regulatory proteins bound to actin filaments upon activation and in the force generation process are also described. Finally, the roles of structural alterations and dynamics of the actin filaments are discussed in conjunction with the regulation mechanism and the force generation mechanism.
Advances in Experimental Medicine and Biology | 2003
Kanji Oshima; Yasunori Takezawa; Yasunobu Sugimoto; Maya Kiyotoshi; Katsuzo Wakabayashi
Analysis of the myosin-based meridional intensity data in the X-ray diffraction patterns of live frog skeletal muscles was performed to propose a more precise model for a myosin crown periodicity and an axial disposition of two-headed crossbridges along the thick filament in a sarcomere. Modeling studies revealed that the thick filament has a mixed structure of two different periodicities of the myosin crossbridge crown arrangement and that the crown periodicity and the axial disposition of crossbridges are altered when muscle goes from the relaxed state to the contracting state. Factors that primarily affect the meridional intensities were examined.
Journal of Applied Crystallography | 2011
Kanji Oshima; Yasunobu Sugimoto; Katsuzo Wakabayashi
A novel method to correct a partial sampling effect, due to the hexagonal filament array of a statistical superlattice form, on the thick (myosin)-filament-based layer lines in X-ray diffraction patterns from higher-vertebrate striated muscle has been developed using the cylindrically averaged difference Patterson function [ΔQ(r, z)]. The method involves cutting off the inter-filament vector peaks that appear in the radial region beyond ∼32 nm on the ΔQ(r, z) map calculated from the observed layer-line intensities, and then deducing the single-myosin-filament transforms by inverse Fourier transformation of the truncated ΔQ(r, z). The accuracy of the cut-off method was tested using a single-myosin-filament model and a hexagonal filament-array model with a size of one superlattice unit cell. The layer-line intensities calculated from the truncated ΔQ(r, z) of the hexagonal filament-array model showed few sampling peaks, the layer lines being effectively coincident with those from the single-filament model except for the intensities close to the meridian. Some residual differences were caused by the face-to-face inter-crossbridge vectors between closest neighboring filaments, which correspond to ∼27.5% of the total number of crossbridge vectors in the truncated ΔQ(r, z) map, but the face-to-face inter-crossbridge vectors contributed mainly to the intensities close to the meridian. Their remnant off-meridional layer-line intensity components did not significantly affect a search for the optimum azimuthal orientation of myosin crossbridges in the resting state of muscle.
Journal of Molecular Biology | 2007
Kanji Oshima; Yasunori Takezawa; Yasunobu Sugimoto; Takakazu Kobayashi; Thomas C. Irving; Katsuzo Wakabayashi
eLS | 2001
Katsuzo Wakabayashi; Yasunobu Sugimoto; Yasunori Takezawa; Kanji Oshima; Tatsuhito Matsuo; Yutaka Ueno; Thomas C. Irving
Nihon Kessho Gakkaishi | 2013
Kanji Oshima; Katsuzo Wakabayashi
生物物理 | 2010
Kanji Oshima; Daron M. Standley; Eiji Kanamori; Yoichi Murakami; Tomotaka Oroguchi; Mitsunori Ikeguchi; Mamoru Sato; Haruki Nakamura
Biophysics | 2010
Kanji Oshima; Daron M. Standley; Eiji Kanamori; Yoichi Murakami; Tomotaka Oroguchi; Mitsunori Ikeguchi; Mamoru Sato; Haruki Nakamura
Biophysical Journal | 2010
Kanji Oshima; Yasunori Takezawa; Yasunobu Sugimoto; Katsuzo Wakabayashi
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National Institute of Advanced Industrial Science and Technology
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