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Dive into the research topics where Kaori Yamamoto is active.

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Featured researches published by Kaori Yamamoto.


Journal of Biological Chemistry | 2004

Direct Measurement of the Thermodynamic Parameters of Amyloid Formation by Isothermal Titration Calorimetry

József Kardos; Kaori Yamamoto; Kazuhiro Hasegawa; Hironobu Naiki; Yuji Goto

Amyloid fibril deposition is associated with over 20 degenerative diseases, including Alzheimers, Parkinsons, and prion diseases. Although research over the last few years has revealed the morphology and structural features of the amyloid form, knowledge about the thermodynamics of amyloid formation is limited. Here, we report for the first time a direct thermodynamic study of amyloid formation using isothermal titration calorimetry. β2-Microglobulin, a protein responsible for dialysis-related amyloidosis, was used for extending amyloid fibrils in a seed-controlled reaction in the cell of the calorimeter. We investigated the enthalpy and heat capacity changes of the reaction, where the monomeric, acid-denatured molecules adopt an ordered, cross-β-sheet structure in the rigid amyloid fibrils. Despite the dramatic difference in morphology, β2-microglobulin exhibited a similar heat capacity change upon amyloid formation to that of the folding to the native globular state, whereas the enthalpy change of the reaction proved to be markedly lower. In comparison with the native state, the results outline the important structural features of the amyloid fibrils: a similar extent of surface burial even with the supramolecular architecture of amyloid fibrils, a lower level of internal packing, and the possible presence of unfavorable side chain contributions.


Journal of Biological Chemistry | 2006

Conformation of Amyloid Fibrils of beta2-Microglobulin Probed by Tryptophan Mutagenesis

Miho Kihara; Eri Chatani; Kentaro Iwata; Kaori Yamamoto; Takanori Matsuura; Atsushi Nakagawa; Hironobu Naiki; Yuji Goto

β2-Microglobulin (β2-m), a protein responsible for dialysis-related amyloidosis, adopts an immunoglobulin domain fold in its native state. Although β2-m has Trp residues at positions 60 and 95, both are located near the surface of the domain. Hence, β2-m does not have a conserved Trp common to other immunoglobulin domains, which is buried in close proximity to the disulfide bond. To study the structure of amyloid fibrils in relation to their native fold, we prepared a series of Trp mutants. Trp60 and Trp95 were both replaced with Phe, and a single Trp was introduced at various positions. Among various mutants, W39-β2-m, in which a Trp was introduced at the position corresponding to the conserved Trp, exhibited a remarkable quenching of fluorescence in the native state, as observed for other immunoglobulin domains. An x-ray structural analysis revealed that W39-β2-m assumes the native fold with Trp39 located in the vicinity of the disulfide bond. Comparison of the fluorescence spectra of various mutants for the native and fibrillar forms indicated that, while the Trp residues introduced in the middle of the β2-m sequence tend to be buried in the fibrils, those located in the C-terminal region are more exposed. In addition, the fluorescence spectra of fibrils prepared at pH 2.5 and 7.0 revealed a large difference in the fluorescence intensity for W60-β2-m, implying a major structural difference between them.


Nature Communications | 2014

Myocardium-derived angiopoietin-1 is essential for coronary vein formation in the developing heart

Yoh Arita; Yoshikazu Nakaoka; Taichi Matsunaga; Hiroyasu Kidoya; Kohei Yamamizu; Yuichiro Arima; Takahiro Kataoka-Hashimoto; Kuniyasu Ikeoka; Taku Yasui; Takeshi Masaki; Kaori Yamamoto; Kaori Higuchi; Jin-Sung Park; Manabu Shirai; Koichi Nishiyama; Hiroyuki Yamagishi; Kinya Otsu; Hiroki Kurihara; Takashi Minami; Keiko Yamauchi-Takihara; Gou Young Koh; Naoki Mochizuki; Nobuyuki Takakura; Yasushi Sakata; Jun Yamashita; Issei Komuro

The origin and developmental mechanisms underlying coronary vessels are not fully elucidated. Here we show that myocardium-derived angiopoietin-1 (Ang1) is essential for coronary vein formation in the developing heart. Cardiomyocyte-specific Ang1 deletion results in defective formation of the subepicardial coronary veins, but had no significant effect on the formation of intramyocardial coronary arteries. The endothelial cells (ECs) of the sinus venosus (SV) are heterogeneous population, composed of APJ-positive and APJ-negative ECs. Among these, the APJ-negative ECs migrate from the SV into the atrial and ventricular myocardium in Ang1-dependent manner. In addition, Ang1 may positively regulate venous differentiation of the subepicardial APJ-negative ECs in the heart. Consistently, in vitro experiments show that Ang1 indeed promotes venous differentiation of the immature ECs. Collectively, our results indicate that myocardial Ang1 positively regulates coronary vein formation presumably by promoting the proliferation, migration and differentiation of immature ECs derived from the SV.


FEBS Letters | 2010

The amyloid fibrils of the constant domain of immunoglobulin light chain

Kaori Yamamoto; Hisashi Yagi; Young Ho Lee; József Kardos; Yoshihisa Hagihara; Hironobu Naiki; Yuji Goto

Light chain‐associated (AL) amyloidosis is characterized by dominant fibril deposition of the variable domain (VL) of an immunoglobulin light chain, and thus its constant domain (CL) has been considered not to be amyloidogenic. We examined the in vitro fibril formation of the isolated CL in comparison with β2‐microglobulin (β2‐m), an immunoglobulin domain‐like amyloidogenic protein responsible for dialysis‐related amyloidosis. Two methods useful for β2‐m at neutral pH also induced amyloid fibrils of CL, which were monitored by thioflavin‐T binding and electron microscopy (EM). These results suggest that CL plays an important role, more than previously assumed, in the development of AL‐amyloidosis.


Journal of Molecular and Cellular Cardiology | 2010

SHP2 mediates gp130-dependent cardiomyocyte hypertrophy via negative regulation of skeletal alpha-actin gene

Yoshikazu Nakaoka; Wataru Shioyama; Satoshi Kunimoto; Yoh Arita; Kaori Higuchi; Kaori Yamamoto; Yasushi Fujio; Keigo Nishida; Tadashi Kuroda; Hisao Hirota; Keiko Yamauchi-Takihara; Toshio Hirano; Issei Komuro; Naoki Mochizuki

Morphological and biochemical phenotypes of cardiomyocyte hypertrophy are determined by neurohumoral factors. Stimulation of G protein-coupled receptor (GPCR) results in uniform cell enlargement in all directions with an increase in skeletal alpha-actin (alpha-SKA) gene expression, while stimulation of gp130 receptor by interleukin-6 (IL-6)-related cytokines induces longitudinal elongation with no increase in alpha-SKA gene expression. Thus, alpha-SKA is a discriminating marker for hypertrophic phenotypes; however, regulatory mechanisms of alpha-SKA gene expression remain unknown. Here, we clarified the role of SH2-containing protein tyrosine phosphatase 2 (SHP2) in alpha-SKA gene expression. In neonatal rat cardiomyocytes, endothelin-1 (ET-1), a GPCR agonist, but not leukemia inhibitory factor (LIF), an IL-6-related cytokine, induced RhoA activation and promotes alpha-SKA gene expression via RhoA. In contrast, LIF, but not ET-1, induced activation of SHP2 in cardiomyocytes, suggesting that SHP2 might negatively regulate alpha-SKA gene expression downstream of gp130. Therefore, we examined the effect of adenovirus-mediated overexpression of wild-type SHP2 (SHP2(WT)), dominant-negative SHP2 (SHP2(C/S)), or beta-galactosidase (beta-gal), on alpha-SKA gene expression. LIF did not upregulate alpha-SKA mRNA in cardiomyocytes overexpressing either beta-gal or SHP2(WT). In cardiomyocytes overexpressing SHP2(C/S), LIF induced upregulation of alpha-SKA mRNA, which was abrogated by concomitant overexpression of either C3-toxin or dominant-negative RhoA. RhoA was activated after LIF stimulation in the cardiomyocytes overexpressing SHP2(C/S), but not in myocytes overexpressing beta-gal. Furthermore, SHP2 mediates LIF-induced longitudinal elongation of cardiomyocytes via ERK5 activation. Collectively, these findings indicate that SHP2 negatively regulates alpha-SKA expression via RhoA inactivation and suggest that SHP2 implicates ERK5 in cardiomyocyte elongation downstream of gp130.


International Heart Journal | 2013

Tocilizumab for the Treatment of Patients With Refractory Takayasu Arteritis

Yoshikazu Nakaoka; Kaori Higuchi; Yoh Arita; Michio Otsuki; Kaori Yamamoto; Takahiro Hashimoto-Kataoka; Taku Yasui; Kuniyasu Ikeoka; Tomohito Ohtani; Yasushi Sakata; Yoshihito Shima; Atsushi Kumanogoh; Keiko Yamauchi-Takihara; Toshio Tanaka; Tadamitsu Kishimoto; Issei Komuro


Journal of Molecular Biology | 2008

Thiol Compounds Inhibit the Formation of Amyloid Fibrils by β2-Microglobulin at Neutral pH

Kaori Yamamoto; Hisashi Yagi; Daisaku Ozawa; Kenji Sasahara; Hironobu Naiki; Yuji Goto


生物物理 | 2008

3P-008 β2-ミクログロブリンとの比較による免疫グロブリン軽鎖C_Lのアミロイド線維形成能の評価(蛋白質・物性(3),第46回日本生物物理学会年会)

Kaori Yamamoto; Hisashi Yagi; Yoshihisa Hagihara; Hironobu Naiki; Yuji Goto


Seibutsu Butsuri | 2008

3P-008 The ability of fibril formation of the constant domain of immunoglobulin light chain in comparison with β2-microglobulin(The 46th Annual Meeting of the Biophysical Society of Japan)

Kaori Yamamoto; Hisashi Yagi; Yoshihisa Hagihara; Hironobu Naiki; Yuji Goto


Seibutsu Butsuri | 2007

3P052 The effects of reductant on the amyloid fibril formation of β2-microglobulin(Proteins-stability, folding, and other physicochemical properties,Poster Presentations)

Kaori Yamamoto; Daisaku Ozawa; Hisashi Yagi; Hironobu Naiki; Yuji Goto

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Yoshihisa Hagihara

National Institute of Advanced Industrial Science and Technology

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