Karen A. Simon
Syracuse University
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Publication
Featured researches published by Karen A. Simon.
Applied and Environmental Microbiology | 2007
Shuyu Hou; Erik A. Burton; Karen A. Simon; Dustin Blodgett; Yan Yeung Luk; Dacheng Ren
ABSTRACT Bacterial biofilms cause serious problems, such as antibiotic resistance and medical device-related infections. To further understand bacterium-surface interactions and to develop efficient control strategies, self-assembled monolayers (SAMs) of alkanethiols presenting different functional groups on gold films were analyzed to determine their resistance to biofilm formation. Escherichia coli was labeled with green florescence protein, and its biofilm formation on SAM-modified surfaces was monitored by confocal laser scanning microscopy. The three-dimensional structures of biofilms were analyzed with the COMSTAT software to obtain information about biofilm thickness and surface coverage. SAMs presenting methyl, l-gulonamide (a sugar alcohol tethered with an amide bond), and tri(ethylene glycol) (TEG) groups were tested. Among these, the TEG-terminated SAM was the most resistant to E. coli biofilm formation; e.g., it repressed biofilm formation by E. coli DH5α by 99.5% ± 0.1% for 1 day compared to the biofilm formation on a bare gold surface. When surfaces were patterned with regions consisting of methyl-terminated SAMs surrounded by TEG-terminated SAMs, E. coli formed biofilms only on methyl-terminated patterns. Addition of TEG as a free molecule to growth medium at concentrations of 0.1 and 1.0% also inhibited biofilm formation, while TEG at concentrations up to 1.5% did not have any noticeable effects on cell growth. The results of this study suggest that the reduction in biofilm formation on surfaces modified with TEG-terminated SAMs is a result of multiple factors, including the solvent structure at the interface, the chemorepellent nature of TEG, and the inhibitory effect of TEG on cell motility.
Bioorganic & Medicinal Chemistry Letters | 2008
Yongbin Han; Shuyu Hou; Karen A. Simon; Dacheng Ren; Yan Yeung Luk
A collection of structurally closely related furanones was synthesized to identify the most important structural elements in brominated furanones for inhibiting the formation of bacterial biofilms. The results suggest that a conjugated exocyclic vinyl bromide on the furanone ring is the most important structural element for the non-toxic but inhibition activity for Escherichia coli biofilm formation. Furanones bearing monosubstituted bromide groups on saturated carbons were found to have a toxic effect that attenuates the bacterial growth.
Langmuir | 2009
Erik A. Burton; Karen A. Simon; Shuyu Hou; Dacheng Ren; Yan Yeung Luk
Chemical gradients play an important role in guiding the activities of both eukaryotic and prokaryotic cells. Here, we used molecularly well-defined chemical gradients formed by self-assembled monolayers (SAMs) on gold films to reveal that mammalian cell adhesion and bacterial biofilm formation respond differently to a gradient of surface chemistry that resists cell attachment. Gradient self-assembled monolayers (SAMs) consisting of two mixed alkanethiols were fabricated by differential exposure of the gold film to one alkanethiol, followed by soaking in another alkanethiol solution. A gradient in bioinertness that resisted cell attachment was created on SAMs from a gradient in the surface density of HS(CH2)11(OCH2CH2)3OH, backfilled with either HS(CH2)11OH or HS(CH2)11CH3. Measurements of the amounts of mammalian cells and bacterial biofilms on these gradient surfaces reveal that, for mammalian cells, a critical density of adhesion ligands from absorbed proteins on surfaces exists for supporting maximum adhesion and proliferation, whereas for the bacterium Escherichia coli , the amount of biofilm formed on surfaces increased linearly with the surface density of adhesive groups (methyl or hydroxyl groups) in different media. These results are consistent with mammalian cell adhesion requiring an anchorage via specific molecular recognitions and suggest that biofilms can form by immobilization of bacteria via nonspecific interaction between bacteria and surfaces.
Langmuir | 2011
Karen A. Simon; Gauri S. Shetye; Ulrich Englich; Lei Wu; Yan Yeung Luk
Crystallization of proteins is important for fundamental studies and biopharmaceutical development but remains largely an empirical science. Here, we report the use of organic salts that can form a class of unusual nonamphiphilic lyotropic liquid crystals to crystallize the protein lysozyme. Certain nonamphiphilic organic molecules with fused aromatic rings and two charges can assemble into stable thread-like noncovalent polymers that may further form liquid crystal phases in water, traditionally termed chromonic liquid crystals. Using five of these mesogenic molecules as additives to induce protein crystallization, we discover that molecules that can form liquid crystal phases in water are highly effective at inducing the crystal formation of lysozyme, even at concentrations significantly lower than that required for forming liquid crystal phases. This result reveals an example of inducing protein crystallization by the molecular assembly of the additives, and is consistent with a new mechanism by which the strong hydration of an assembly process provides a gradual means to compete for the water molecules to enable solvated proteins to form crystals.
Langmuir | 2007
Karen A. Simon; Preeti Sejwal; Ryan B. Gerecht; Yan Yeung Luk
Journal of the American Chemical Society | 2009
Lei Wu; Jyotsana Lal; Karen A. Simon; Erik A. Burton; Yan Yeung Luk
Journal of the American Chemical Society | 2006
Yongbin Han; Kejun Cheng; Karen A. Simon; Yanmei Lan; Preeti Sejwal; Yan Yeung Luk
Journal of the American Chemical Society | 2007
Karen A. Simon; Erik A. Burton; Yongbin Han; Jun Li; and Anny Huang; Yan Yeung Luk
Chemistry of Materials | 2010
Karen A. Simon; Erik A. Burton; Fei Cheng; Nisha Varghese; Eric R. Falcone; Lei Wu; Yan Yeung Luk
Journal of Physical Chemistry B | 2010
Karen A. Simon; Preeti Sejwal; Eric R. Falcone; Erik A. Burton; Sijie Yang; Deepali Prashar; Debjyoti Bandyopadhyay; Sri Kamesh Narasimhan; Nisha Varghese; Nemal S. Gobalasingham; Jason B. Reese; Yan Yeung Luk