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Dive into the research topics where Katherine Shim is active.

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Featured researches published by Katherine Shim.


Developmental Biology | 2011

Sprouty1 and Sprouty2 limit both the size of the otic placode and hindbrain Wnt8a by antagonizing FGF signaling.

Amanda A. Mahoney Rogers; Jian Zhang; Katherine Shim

Multiple signaling molecules, including Fibroblast Growth Factor (FGF) and Wnt, induce two patches of ectoderm on either side of the hindbrain to form the progenitor cell population for the inner ear, or otic placode. Here we report that in Spry1, Spry2 compound mutant embryos (Spry1⁻/⁻; Spry2⁻/⁻ embryos), the otic placode is increased in size. We demonstrate that the otic placode is larger due to the recruitment of cells, normally destined to become cranial epidermis, into the otic domain. The enlargement of the otic placode observed in Spry1⁻/⁻; Spry2⁻/⁻ embryos is preceded by an expansion of a Wnt8a expression domain in the adjacent hindbrain. We demonstrate that both the enlargement of the otic placode and the expansion of the Wnt8a expression domain can be rescued in Spry1⁻/⁻; Spry2⁻/⁻ embryos by reducing the gene dosage of Fgf10. Our results define a FGF-responsive window during which cells can be continually recruited into the otic domain and uncover SPRY regulation of the size of a putative Wnt inductive center.


Developmental Dynamics | 2014

Compensatory regulation of the size of the inner ear in response to excess induction of otic progenitors by fibroblast growth factor signaling

Jian Zhang; Kevin D. Wright; Amanda A. Mahoney Rogers; Molly M. Barrett; Katherine Shim

Background: The otic placode comprises the progenitors of the inner ear and the neurons that convey hearing and balance information to the brain. Transplantation studies in birds and amphibians demonstrate that when the otic placode is morphologically visible as a thickened patch of ectoderm, it is first committed to an otic fate. Fibroblast growth factor (FGF) signaling initiates induction of the otic placode, and levels of FGF signaling are fine‐tuned by the Sprouty family of antagonists of receptor tyrosine kinase signaling. Results: Here, we examined the size of the otic placode and cup by combinatorial inactivation of the Sprouty1 and Sprouty2 genes. Interestingly, in a Sprouty gene dosage series, early enlargement of the otic placode was progressively restored to normal. Restoration of otic size was preceded by normal levels of FGF signaling, reduced cell proliferation and reduced cell death. Conclusions: Our study demonstrates that excess otic placode cells, which form in response to increased FGF signaling, are not maintained in mammals. This suggests that growth plasticity exists in the mammalian otic placode and cup, and that FGF signaling may not be sufficient to induce the genetic program that maintains otic fate. Developmental Dynamics 243:1317–1327, 2014.


BMC Developmental Biology | 2015

Cooperative and independent functions of FGF and Wnt signaling during early inner ear development

Kevin D. Wright; Amanda A. Mahoney Rogers; Jian Zhang; Katherine Shim

BackgroundIn multiple vertebrate organisms, including chick, Xenopus, and zebrafish, Fibroblast Growth Factor (FGF) and Wnt signaling cooperate during formation of the otic placode. However, in the mouse, although FGF signaling induces Wnt8a expression during induction of the otic placode, it is unclear whether these two signaling pathways functionally cooperate. Sprouty (Spry) genes encode intracellular antagonists of receptor tyrosine kinase signaling, including FGF signaling. We previously demonstrated that the Sprouty1 (Spry1) and Sprouty2 (Spry2) genes antagonize FGF signaling during induction of the otic placode. Here, we investigate cross talk between FGF/SPRY and Wnt signaling during otic placode induction and assess whether these two signaling pathways functionally cooperate during early inner ear development in the mouse.MethodsEmbryos were generated carrying combinations of a Spry1 null allele, Spry2 null allele, β-catenin null allele, or a Wnt reporter transgene. Otic phenotypes were assessed by in situ hybridization, semi-quantitative reverse transcriptase PCR, immunohistochemistry, and morphometric analysis of sectioned tissue.ResultsComparison of Spry1, Spry2, and Wnt reporter expression in pre-otic and otic placode cells indicates that FGF signaling precedes and is active in more cells than Wnt signaling. We provide in vivo evidence that FGF signaling activates the Wnt signaling pathway upstream of TCF/Lef transcriptional activation. FGF regulation of Wnt signaling is functional, since early inner ear defects in Spry1 and Spry2 compound mutant embryos can be genetically rescued by reducing the activity of the Wnt signaling pathway. Interestingly, we find that although the entire otic placode increases in size in Spry1 and Spry2 compound mutant embryos, the size of the Wnt-reporter-positive domain does not increase to the same extent as the Wnt-reporter-negative domain.ConclusionsThis study provides genetic evidence that FGF and Wnt signaling cooperate during early inner ear development in the mouse. Furthermore, our data suggest that although specification of the otic placode may be globally regulated by FGF signaling, otic specification of cells in which both FGF and Wnt signaling are active may be more tightly regulated.


Oncogene | 2016

Atypical role of sprouty in colorectal cancer: sprouty repression inhibits epithelial-mesenchymal transition.

Q Zhang; T Wei; Katherine Shim; Kevin D. Wright; K Xu; H L Palka-Hamblin; A Jurkevich; Sharad Khare

Sprouty (SPRY) appears to act as a tumor suppressor in cancer, whereas we demonstrated that SPRY2 functions as a putative oncogene in colorectal cancer (CRC) (Oncogene, 2010, 29: 5241–5253). We investigated the mechanisms by which SPRY regulates epithelial–mesenchymal transition (EMT) in CRC. SPRY1 and SPRY2 mRNA transcripts were significantly upregulated in human CRC. Suppression of SPRY2 repressed AKT2 and EMT-inducing transcription factors and significantly increased E-cadherin expression. Concurrent downregulation of SPRY1 and SPRY2 also increased E-cadherin and suppressed mesenchymal markers in colon cancer cells. An inverse expression pattern between AKT2 and E-cadherin was established in a human CRC tissue microarray. SPRY2 negatively regulated miR-194-5p that interacts with AKT2 3′ untranslated region. Mir-194 mimics increased E-cadherin expression and suppressed cancer cell migration and invasion. By confocal microscopy, we demonstrated redistribution of E-cadherin to plasma membrane in colon cancer cells transfected with miR-194. Spry1−/− and Spry2−/− double mutant mouse embryonic fibroblasts exhibited decreased cell migration while acquiring several epithelial markers. In CRC, SPRY drive EMT and may serve as a biomarker of poor prognosis.


Gastroenterology | 2015

Tu1982 Downregulation of Sprouty Is Associated With Inhibition of Epithelial-Mesenchymal Transition in Colorectal Cancer: An Unique Role of Sprouty Proteins

Qiong Zhang; Katherine Shim; Kevin M. Wright; Alexander Jurkevich; Sharad Khare

Endosome is a membrane-bounded compartment of the endocytic membrane transport pathway from the plasma membrane to the lysosome. Endosome-associated protein sorting nexin 27 (SNX27) is a unique member of sorting nexin family in possessing a PDZ domain. SNX27-retromer as a major retrieval and recycling hub for a variety of transmembrane proteins, many of which play crucial roles during organism growth and cellular homeostasis. We have previously shown that protein-protein interactions with the PDZ domain play roles


Cancer Research | 2015

Abstract 3094: Sprouty and cell proliferation in colorectal cancer

Qiong Zhang; Katherine Shim; Kevin M. Wright; Alexander Jurkevich; Sharad Khare

BACKGROUND & AIMS: Sprouty (SPRY) proteins are evolutionarily conserved modulators of mitogen-activated protein kinase pathway. SPRY2 appears to function as a tumor suppressor in other cancers, whereas we reported that SPRY2 functions as an oncogene in colorectal cancer (CRC). To further understand the oncogenic potential of SPRY1 and SPRY2 in CRC, we investigated the mechanisms by which these proteins regulate cell proliferation in CRC. MATERIALS & METHODS: Human CRC cDNA arrays were employed to assess mRNA levels of SPRY1, SPRY2 and p21. SPRY1 and SPRY2 were knocked-down in CaCo2 colon cancer cells by siRNA. Effects of SPRY were assessed by immunoblotting, real time PCR, luciferase reporter assay, and confocal microscopy. Mouse embryonic fibroblasts (MEFs) derived from SPRY mutant mice were utilized to dissect SPRY functions in mesenchymal cells. RESULTS: In this study, surprisingly, we present evidence to suggest that concomitant activation of ERK, p-38 and AKT signaling cascades is insufficient to drive cancer cell proliferation in SPRY modulated cells. Suppression of SPRY in colon cancer cells upregulates p21, a cell cycle inhibitor. SPRY2 dependent p21 promoter activation may account for upregulation of p21 expression and inhibition of cancer cell proliferation. Underscoring the biological relevance of these findings, recombination of floxed SPRY1 and SPRY2 alleles in mouse embryonic fibroblasts (MEFs) resulted in increased expression of p21. Finally, in a human CRC cDNA array we established an inverse correlation of SPRY1 and SPRY2 with p21 mRNA expression. CONCLUSIONS: Together, this study indicates that SPRY is a target of therapeutic intervention in CRC. Citation Format: Qiong Zhang, Katherine Shim, Kevin Wright, Alexander Jurkevich, Sharad Khare. Sprouty and cell proliferation in colorectal cancer. [abstract]. In: Proceedings of the 106th Annual Meeting of the American Association for Cancer Research; 2015 Apr 18-22; Philadelphia, PA. Philadelphia (PA): AACR; Cancer Res 2015;75(15 Suppl):Abstract nr 3094. doi:10.1158/1538-7445.AM2015-3094


Developmental Dynamics | 2014

Compensatory regulation of the size of the inner ear in response to excess induction of otic progenitors by fibroblast growth factor signaling: Regulation of OTIC Size

Jian Zhang; Kevin D. Wright; Amanda A. Mahoney Rogers; Molly M. Barrett; Katherine Shim

Background: The otic placode comprises the progenitors of the inner ear and the neurons that convey hearing and balance information to the brain. Transplantation studies in birds and amphibians demonstrate that when the otic placode is morphologically visible as a thickened patch of ectoderm, it is first committed to an otic fate. Fibroblast growth factor (FGF) signaling initiates induction of the otic placode, and levels of FGF signaling are fine‐tuned by the Sprouty family of antagonists of receptor tyrosine kinase signaling. Results: Here, we examined the size of the otic placode and cup by combinatorial inactivation of the Sprouty1 and Sprouty2 genes. Interestingly, in a Sprouty gene dosage series, early enlargement of the otic placode was progressively restored to normal. Restoration of otic size was preceded by normal levels of FGF signaling, reduced cell proliferation and reduced cell death. Conclusions: Our study demonstrates that excess otic placode cells, which form in response to increased FGF signaling, are not maintained in mammals. This suggests that growth plasticity exists in the mammalian otic placode and cup, and that FGF signaling may not be sufficient to induce the genetic program that maintains otic fate. Developmental Dynamics 243:1317–1327, 2014.


Developmental Dynamics | 2014

Compensatory regulation of the size of the inner ear in response to excess induction of otic progenitors by FGF signaling

Jian Zhang; Kevin D. Wright; Amanda A. Mahoney Rogers; Molly M. Barrett; Katherine Shim

Background: The otic placode comprises the progenitors of the inner ear and the neurons that convey hearing and balance information to the brain. Transplantation studies in birds and amphibians demonstrate that when the otic placode is morphologically visible as a thickened patch of ectoderm, it is first committed to an otic fate. Fibroblast growth factor (FGF) signaling initiates induction of the otic placode, and levels of FGF signaling are fine‐tuned by the Sprouty family of antagonists of receptor tyrosine kinase signaling. Results: Here, we examined the size of the otic placode and cup by combinatorial inactivation of the Sprouty1 and Sprouty2 genes. Interestingly, in a Sprouty gene dosage series, early enlargement of the otic placode was progressively restored to normal. Restoration of otic size was preceded by normal levels of FGF signaling, reduced cell proliferation and reduced cell death. Conclusions: Our study demonstrates that excess otic placode cells, which form in response to increased FGF signaling, are not maintained in mammals. This suggests that growth plasticity exists in the mammalian otic placode and cup, and that FGF signaling may not be sufficient to induce the genetic program that maintains otic fate. Developmental Dynamics 243:1317–1327, 2014.


Developmental Biology | 2010

The control of inner ear morphogenesis by Sprouty and Tbx1 genes in mouse models of 22q11.2 deletion syndrome

Yuichiro Yaguchi; Jennifer R. Gardiner; Tian Yu; Katherine Shim; Bernice E. Morrow; M. Albert Basson

transcription factor. This pathway places Hand2 at the center of a complex signaling cascade, but little is known of its function in mammalian craniofacial development since Hand2 embryos die around embryonic day (E) 10.5 from vascular failure. To bypass these defects, we created a conditional deletion of Hand2 using a traditional Cre-loxP system. Using the Wnt1-Cre mouse line, we delete Hand2 within all migrating NCCs. Mutant mice exhibit severe craniofacial defects including mandibular hypoplasia, a single incisor, aglossia, and loss of tympanic rings and Meckels cartilage. These changes are preceded by aberrant maintenance of Dlx5/6 expression in the distal mandibular arch and subsequent upregulation of Runx2 expression. In vitro studies show that Hand2 is able to repress the Dlx5/6 enhancer, I56i. This suggests that Hand2 functions by repressing Dlx5/6 expression within the distal midline. In its absence, Dlx5/6 expression is maintained and results in expression of Runx2 followed by the repatterning of distal tongue mesenchyme to bone.


Developmental Biology | 2010

Sprouty gene function in otic placode induction

Katherine Shim; Amanda Mahoney-Rogers; Jian Zhang

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Jian Zhang

Medical College of Wisconsin

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Kevin D. Wright

Medical College of Wisconsin

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Molly M. Barrett

Medical College of Wisconsin

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Qiong Zhang

University of Missouri

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A Jurkevich

University of Missouri–Kansas City

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