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Dive into the research topics where Kazufumi Kuroda is active.

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Featured researches published by Kazufumi Kuroda.


Biochemical Journal | 2003

A sulphoquinovosyl diacylglycerol is a DNA polymerase e inhibitor

Yoshiyuki Mizushina; Xianai Xu; Hitomi Asahara; Ryo Takeuchi; Masahiko Oshige; Noriko Shimazaki; Masaharu Takemura; Toyofumi Yamaguchi; Kazufumi Kuroda; Stuart Linn; Hiromi Yoshida; Osamu Koiwai; Mineo Saneyoshi; Fumio Sugawara; Kengo Sakaguchi

Sulphoquinovosyl diacylglycerol (SQDG) was reported as a selective inhibitor of eukaryotic DNA polymerases alpha and beta [Hanashima, Mizushina, Ohta, Yamazaki, Sugawara and Sakaguchi (2000) Jpn. J. Cancer Res. 91, 1073-1083] and an immunosuppressive agent [Matsumoto, Sahara, Fujita, Shimozawa, Takenouchi, Torigoe, Hanashima, Yamazaki, Takahashi, Sugawara et al. (2002) Transplantation 74, 261-267]. The purpose of this paper is to elucidate the biochemical properties of the inhibition more precisely. As expected, SQDG could inhibit the activities of mammalian DNA polymerases such as alpha, delta, eta and kappa in vitro in the range of 2-5 micro M, and beta and lambda in vitro in the range of 20-45 micro M. However, SQDG could inhibit only mammalian DNA polymerases epsilon (pol epsilon) activity at less than 0.04 micro M. SQDG bound more tightly to mammalian pol epsilon than the other mammalian polymerases tested. Moreover, SQDG could inhibit the activities of all the polymerases from animals such as fish and insect, but not of the polymerases from plant and prokaryotes. SQDG should, therefore, be called a mammalian pol epsilon-specific inhibitor or animal polymerase-specific inhibitor. To our knowledge, this represents the first report about an inhibitor specific to mammalian pol epsilon.


Biology of the Cell | 1995

Expression patterns of DNA replication enzymes and the regulatory factor DREF during Drosophila development analyzed with specific antibodies

Masamitsu Yamaguchi; Fumiko Hirose; Yoshio Nishimoto; Toyobumi Naruge; Masako Ikeda; Takahisa Hachiya; Katsuyuki Tamai; Kazufumi Kuroda; Akio Matsukage

Summary— Specific antibodies were prepared against Drosophila DNA polymerase e and DREF, a regulatory factor for DNA replication‐related genes. Using these antibodies together with those for DNA polymerase α and proliferating cell nuclear antigen (PCNA), we examined expression patterns and sub‐cellular distributions of these proteins during Drosophila development. DNA polymerase α, ε and PCNA proteins were maternally stored in unfertilized eggs and maintained at high levels during embryogenesis. With distinct nuclear localization, proteins were observed in embryos at interphase stages throughout the 13 nuclear division cycles, suggesting that they all participate in rapid nuclear DNA replication during these cycles. In contrast, maternal storage of a DREF protein was relatively low and its level increased throughout embryogenesis. Strong nuclear staining with the anti‐DREF antibody was not observed until the nuclear division cycle 8. Immunostaining of various larval tissues from transgenic flies carrying the PCNA gene promoter‐lacZ fusion gene revealed co‐expression of DREF, PCNA and lacZ, suggesting that DREF regulates the expression of PCNA gene in these tissues. In addition, we detected a relatively high level of DREF in adult males as well as females. Since DNA polymerase α, ε and PCNA are hardly detectable in adult males, DREF very likely regulates genes other than those closely linked to DNA replication in adult males.


Journal of Biological Chemistry | 1996

Isolation and Characterization of cDNA for DREF, a Promoter-activating Factor for Drosophila DNA Replication-related Genes

Fumiko Hirose; Masamitsu Yamaguchi; Kazufumi Kuroda; Akira Omori; Takahisa Hachiya; Masako Ikeda; Yoshio Nishimoto; Akio Matsukage


Protein Expression and Purification | 2004

Subunit protein-affinity isolation of Drosophila DNA polymerase ε catalytic subunit

Masahiko Oshige; Ryo Takeuchi; Ryuji Ruike; Kazufumi Kuroda; Kengo Sakaguchi


Biochemical and Biophysical Research Communications | 1997

DNA Polymerase ϵ fromDrosophila melanogaster

Norikazu Aoyagi; Masahiko Oshige; Fumiko Hirose; Kazufumi Kuroda; Akio Matsukage; Kengo Sakaguchi


Journal of Biochemistry | 1981

Comparative Study on F-Type Pyocins of Pseudomonas aeruginosa

Kazufumi Kuroda; Makoto Kageyama


Journal of Biochemistry | 1979

Biochemical Properties of a New Flexuous Bacteriocin, Pyocin Fl, Produced by Pseudomonas aeruginosa

Kazufumi Kuroda; Makoto Kageyama


Biochemical and Biophysical Research Communications | 1997

Induction of Ubiquitin Conjugating Enzyme Activity for Degradation of Topoisomerase IIα during Adenovirus E1A-Induced Apoptosis

Takuma Nakajima; Michiko Kimura; Kazufumi Kuroda; Masato Tanaka; Akihiko Kikuchi; Hiroaki Seino; Fumiaki Yamao; Kinichiro Oda


Journal of Biochemistry | 1983

Biochemical Relationship among Three F-Type Pyocins, Pyocin F1, F2, and F3, and Phage KF1

Kazufumi Kuroda; Ritsuko Kagiyama


Journal of Biochemistry | 2002

Epitope Distribution of Randomly Established Monoclonal Antibodies against Human Type II DNA Topoisomerases

Ayako Sakaguchi; Mitsuko Miyaike; Kazufumi Kuroda; Naohito Nozaki; Masato Tanaka; Makoto Hibino; Yasuo Fujii; Satoshi Kato; Akihiko Kikuchi

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Kengo Sakaguchi

Tokyo University of Science

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Masahiko Oshige

Tokyo University of Science

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Akio Matsukage

Japan Women's University

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Masamitsu Yamaguchi

Kyoto Institute of Technology

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Ryo Takeuchi

Tokyo University of Science

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