Kazuki Ogata
Kyoto University
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Featured researches published by Kazuki Ogata.
Dalton Transactions | 2013
Katsuhiro Isozaki; Yusuke Haga; Kazuki Ogata; Hikaru Takaya
Pd- and Pt-bound bis-metalated peptides were synthesised by the condensation of Pd- or Pt-aldimine-complex-bound glutamic acids to afford the four possible metal isomers of bis-Pd and bis-Pt-homometalated dipeptides and PdPt- and PtPd-heterometalated dipeptides without metal disproportionation. Ultrasound-induced self-assembly of these bis-metalated peptides proceeded effectively to afford supramolecular gels that displayed well-ordered metal arrays. The formation of parallel β-sheet type aggregates through interpeptide amide-amide hydrogen bonding was confirmed by IR, scanning electron microscopy (SEM), and synchrotron X-ray diffraction analyses (WAXS and SAXS). The mechanism of the ultrasound-induced self-assembly of the metalated dipeptides was elucidated via kinetic and association experiments by (1)H NMR, in which ultrasound-triggered dissociation of intramolecular hydrogen bonds between the chloride ligands of the Pd- and Pt-complexes and amides initially occurred. This was followed by the formation of intermolecular amide-amide hydrogen bonds, which afforded the corresponding oligomeric peptide self-assembly as the nucleus for supramolecular aggregation. The observed first-order relationship of the gelation rate versus the sonication frequency suggested that the microcavitation generated under sonication conditions acted as a crucial trigger and provided a reaction field for efficient self-assembly.
Chemistry: A European Journal | 2008
Akio Tannna; Shigeaki Kamuro; Masayuki Hieda; Kazuki Ogata; Shun-Ichi Murahashi; Hikaru Takaya
The synthesis, structure, and dynamic behavior of bistable C- and N-bound isomers of transition-metal cyanocarbanions are described. A series of C-bound cyclopentadienyl (Cp) ruthenium phosphane complexes, [Ru{CH(CN)SO2Ph}(Cp)L1L2] (3), and their N-bound isomers, [Ru+(Cp)(NCCH(-)SO2Ph)L1L2] (4), were prepared by treating [RuCl(Cp)(PR3)2] with the sodium salt of phenylsulfonylacetonitrile and performing ligand-exchange reactions with the resulting compounds. Structural characterization by X-ray diffraction indicates that the cyanocarbanion moiety of 3 has an alpha-metalated structure, whereas that of 4 has a zwitterionic, end-on structure. Heating these complexes in aprotic solvents gives rise to irreversible linkage isomerization between C- and N-bound isomers, in which the relative thermal stabilities vary greatly depending on the steric and electronic nature of the ligands. Mechanistic studies of N-to-C isomerization revealed that the reaction proceeds irreversibly in a unimolecular manner without the formation of coordinatively unsaturated species. A metal-sliding process, which occurs over the -C-C triple chemical bond N pi-conjugated surface of the cyanocarbanion moiety, was suggested by results from kinetic studies and density functional theory (DFT) calculations. C-to-N isomerizations proceed by the above-mentioned intramolecular process, with a temperature-dependent contribution from the formation and cleavage of mu2-C,N coordination dimers [{Ru{CH(CN)SO2Ph}(Cp)(PPh3)}2] (15 and 16).
Chemistry: A European Journal | 2013
Kazuki Ogata; Daisuke Sasano; Tomoya Yokoi; Katsuhiro Isozaki; Ryota Yoshida; Toshio Takenaka; Hirofumi Seike; Tetsuya Ogawa; Hiroki Kurata; Nobuhiro Yasuda; Hikaru Takaya; Masaharu Nakamura
The NCN-pincer Pd-complex-bound norvalines Boc-D/L-[PdCl(dpb)]Nva-OMe (1) were synthesized in multigram quantities. The molecular structure and absolute configuration of 1 were unequivocally determined by single-crystal X-ray structure analysis. The robustness of 1 under acidic/basic conditions provides a wide range of N-/C-terminus convertibility based on the related synthetic transformations. Installation of a variety of functional groups into the N-/C-terminus of 1 was readily carried out through N-Boc- or C-methyl ester deprotection and subsequent condensations with carboxylic acids, R(1)COOH, or amines, R(2)NH2 , to give the corresponding N-/C-functionalized norvalines R(1)-D/L-[PdCl(dpb)]Nva-R(2) 2-9. The dipeptide bearing two Pd units 10 was successfully synthesized through the condensation of C-free 1 with N-free 1. The robustness of these Pd-bound norvalines was adequately demonstrated by the preservation of the optical purity and Pd unit during the synthetic transformations. The lipophilic Pd-bound norvalines L-2, Boc-L-[PdCl(dpb)]Nva-NH-n-C11H23, and L-4, n-C4H9CO-L-[PdCl(dpb)]Nva-NH-n-C11H23, self-assembled in aromatic solvents to afford supramolecular gels. The assembled structures in a thermodynamically stable single crystal of L-2 and kinetically stable supramolecular aggregates of L-2 were precisely elucidated by cryo-TEM, WAX, SAXS, UV/Vis, IR analyses, and single-crystal X-ray crystallography. An antiparallel β-sheet-type aggregate consisting of an infinite one-dimensional hydrogen-bonding network of amide groups and π-stacking of PdCl(dpb) moieties was observed in the supramolecular gel fiber of L-2, even though discrete dimers are assembled through hydrogen bonding in the thermodynamically stable single crystal of L-2. The disparate DSC profiles of the single crystal and xerogel of L-2 indicate different thermodynamics of the molecular assembly process.
Chemistry-an Asian Journal | 2016
Katsuhiro Isozaki; Tomoya Yokoi; Ryota Yoshida; Kazuki Ogata; Daisuke Hashizume; Nobuhiro Yasuda; Koichiro Sadakane; Hikaru Takaya; Masaharu Nakamura
Abstract Two (ONO pincer)ruthenium‐complex‐bound norvalines, Boc−[Ru(pydc)(terpy)]Nva−OMe (1; Boc=tert‐butyloxycarbonyl, terpy=terpyridyl, Nva=norvaline) and Boc−[Ru(pydc)(tBu‐terpy)]Nva−OMe (5), were successfully synthesized and their molecular structures and absolute configurations were unequivocally determined by single‐crystal X‐ray diffraction. The robustness of the pincer Ru complexes and norvaline scaffolds against acidic/basic, oxidizing, and high‐temperature conditions enabled us to perform selective transformations of the N‐Boc and C−OMe termini into various functional groups, such as alkyl amide, alkyl urea, and polyether groups, without the loss of the Ru center or enantiomeric purity. The resulting dialkylated Ru‐bound norvaline, n‐C11H23CO−l‐[Ru(pydc)(terpy)]Nva−NH‐n‐C11H23 (l‐4) was found to have excellent self‐assembly properties in organic solvents, thereby affording the corresponding supramolecular gels. Ru‐bound norvaline l‐1 exhibited a higher catalytic activity for the oxidation of alcohols by H2O2 than parent complex [Ru(pydc)(terpy)] (11 a).
Chemistry Letters | 2011
Takuji Hatakeyama; Yu Ichi Fujiwara; Yoshihiro Okada; Takuma Itoh; Toru Hashimoto; Shintaro Kawamura; Kazuki Ogata; Hikaru Takaya; Masaharu Nakamura
Chemistry Letters | 2012
Kazuki Ogata; Daisuke Sasano; Tomoya Yokoi; Katsuhiro Isozaki; Hirofumi Seike; Hikaru Takaya; Masaharu Nakamura
Chemical Communications | 2012
Katsuhiro Isozaki; Kazuki Ogata; Yusuke Haga; Daisuke Sasano; Tetsuya Ogawa; Hiroki Kurata; Masaharu Nakamura; Hikaru Takaya
Chemistry Letters | 2012
Kazuki Ogata; Daisuke Sasano; Tomoya Yokoi; Katsuhiro Isozaki; Hirofumi Seike; Nobuhiro Yasuda; Tetsuya Ogawa; Hiroki Kurata; Hikaru Takaya; Masaharu Nakamura
Synlett | 2013
Hikaru Takaya; Takashi Iwaya; Kazuki Ogata; Katsuhiro Isozaki; Tomoya Yokoi; Ryota Yoshida; Nobuhiro Yasuda; Hirofumi Seike; Toshio Takenaka; Masaharu Nakamura
Chemistry Letters | 2014
Hikaru Takaya; Katsuhiro Isozaki; Yusuke Haga; Kazuki Ogata